RNA–Protein interactions for RNA: ENST00000430081.5

OPTN-208, Transcript of optineurin, humanhuman

TSL 5

Gene OPTN, Length 848 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-208ENST00000430081 MBIPQ9NS73 344 aa13.26□□□□□ -0.29
OPTN-208ENST00000430081 COL4A1P02462 1669 aa13.25□□□□□ -0.29
OPTN-208ENST00000430081 ELL2O00472 640 aaPredicted RBP13.25□□□□□ -0.29
OPTN-208ENST00000430081 PTPN12Q05209 780 aaKnown RBP13.25□□□□□ -0.29
OPTN-208ENST00000430081 PRKG1Q13976 671 aa13.25□□□□□ -0.29
OPTN-208ENST00000430081 DACT2Q5SW24 774 aa13.25□□□□□ -0.29
OPTN-208ENST00000430081 STRIP1Q5VSL9 837 aa13.25□□□□□ -0.29
OPTN-208ENST00000430081 APOBEC3FQ8IUX4 373 aaKnown RBP13.25□□□□□ -0.29
OPTN-208ENST00000430081 METTL22Q9BUU2 404 aaPredicted RBP13.25□□□□□ -0.29
OPTN-208ENST00000430081 MXD3Q9BW11 206 aa13.25□□□□□ -0.29
OPTN-208ENST00000430081 CFHR5Q9BXR6 569 aa13.25□□□□□ -0.29
OPTN-208ENST00000430081 COA1Q9GZY4 146 aa13.25□□□□□ -0.29
OPTN-208ENST00000430081 BSDC1Q9NW68 430 aaPredicted RBP13.25□□□□□ -0.29
OPTN-208ENST00000430081 MINPP1Q9UNW1 487 aa13.25□□□□□ -0.29
OPTN-208ENST00000430081 MED23Q9ULK4 1368 aa13.24□□□□□ -0.29
OPTN-208ENST00000430081 CCT4P50991 539 aaKnown RBP13.24□□□□□ -0.29
OPTN-208ENST00000430081 CTSWP56202 376 aa13.24□□□□□ -0.29
OPTN-208ENST00000430081 INHBEP58166 350 aa13.24□□□□□ -0.29
OPTN-208ENST00000430081 CALD1Q05682 793 aaKnown RBP13.24□□□□□ -0.29
OPTN-208ENST00000430081 ANGEL1Q9UNK9 670 aaKnown RBP13.24□□□□□ -0.29
OPTN-208ENST00000430081 AKAP11Q9UKA4 1901 aa13.23□□□□□ -0.29
OPTN-208ENST00000430081 MYBBP1AQ9BQG0 1328 aaKnown RBP13.23□□□□□ -0.29
OPTN-208ENST00000430081 SASH1O94885 1247 aa13.23□□□□□ -0.29
OPTN-208ENST00000430081 SPRYD7Q5W111 196 aa13.23□□□□□ -0.29
OPTN-208ENST00000430081 INTS3Q68E01 1043 aaKnown RBP13.23□□□□□ -0.29
OPTN-208ENST00000430081 TTLL5Q6EMB2 1281 aa13.23□□□□□ -0.29
OPTN-208ENST00000430081 SLC10A4Q96EP9 437 aa13.23□□□□□ -0.29
OPTN-208ENST00000430081 IFT57Q9NWB7 429 aa13.23□□□□□ -0.29
OPTN-208ENST00000430081 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.23□□□□□ -0.29
OPTN-208ENST00000430081 LEMD3Q9Y2U8 911 aa13.23□□□□□ -0.29
OPTN-208ENST00000430081 MANSC4A6NHS7 340 aaPredicted RBP13.22□□□□□ -0.29
OPTN-208ENST00000430081 WTIPA6NIX2 430 aaPredicted RBP13.22□□□□□ -0.29
OPTN-208ENST00000430081 IGHMBP2P38935 993 aaKnown RBP13.22□□□□□ -0.29
OPTN-208ENST00000430081 GNAI1P63096 354 aa13.22□□□□□ -0.29
OPTN-208ENST00000430081 NEXNQ0ZGT2 675 aa13.22□□□□□ -0.29
OPTN-208ENST00000430081 LDLRAD1Q5T700 205 aa13.22□□□□□ -0.29
OPTN-208ENST00000430081 CCDC30Q5VVM6 783 aa13.22□□□□□ -0.29
OPTN-208ENST00000430081 TTLL11Q8NHH1 800 aa13.22□□□□□ -0.29
OPTN-208ENST00000430081 ADAMTS8Q9UP79 889 aa13.22□□□□□ -0.29
OPTN-208ENST00000430081 MAP3K2Q9Y2U5 619 aa13.22□□□□□ -0.29
OPTN-208ENST00000430081 TRIM17Q9Y577 477 aa13.22□□□□□ -0.29
OPTN-208ENST00000430081 POLR2AP24928 1970 aaKnown RBP13.21□□□□□ -0.29
OPTN-208ENST00000430081 PPP1R12BO60237 982 aaPredicted RBP13.21□□□□□ -0.29
OPTN-208ENST00000430081 ZNF853P0CG23 659 aa13.21□□□□□ -0.29
OPTN-208ENST00000430081 KIAA0825Q8IV33 1275 aa13.21□□□□□ -0.29
OPTN-208ENST00000430081 ANKRD2Q9GZV1 360 aa13.21□□□□□ -0.29
OPTN-208ENST00000430081 R3HDMLQ9H3Y0 253 aa13.21□□□□□ -0.29
OPTN-208ENST00000430081 GREM2Q9H772 168 aa13.21□□□□□ -0.29
OPTN-208ENST00000430081 ZNF804BA4D1E1 1349 aa13.2□□□□□ -0.3
OPTN-208ENST00000430081 SCN9AQ15858 1988 aa13.2□□□□□ -0.3
OPTN-208ENST00000430081 KCNJ4P48050 445 aa13.2□□□□□ -0.3
OPTN-208ENST00000430081 GTF2IP78347 998 aa13.2□□□□□ -0.3
OPTN-208ENST00000430081 DLGAP5Q15398 846 aa13.2□□□□□ -0.3
OPTN-208ENST00000430081 KSR2Q6VAB6 950 aa13.2□□□□□ -0.3
OPTN-208ENST00000430081 IFNL1Q8IU54 200 aa13.2□□□□□ -0.3
OPTN-208ENST00000430081 DEFB129Q9H1M3 183 aa13.2□□□□□ -0.3
OPTN-208ENST00000430081 PI4KAP2A4QPH2 592 aa13.19□□□□□ -0.3
OPTN-208ENST00000430081 ZBTB48P10074 688 aaPredicted RBP13.19□□□□□ -0.3
OPTN-208ENST00000430081 OTUD7BQ6GQQ9 843 aa13.19□□□□□ -0.3
OPTN-208ENST00000430081 OTOP1Q7RTM1 612 aa13.19□□□□□ -0.3
OPTN-208ENST00000430081 TXNRD3Q86VQ6 643 aa13.19□□□□□ -0.3
OPTN-208ENST00000430081 PI4KAP1Q8N8J0 262 aa13.19□□□□□ -0.3
OPTN-208ENST00000430081 C8orf58Q8NAV2 365 aa13.19□□□□□ -0.3
OPTN-208ENST00000430081 ERO1AQ96HE7 468 aa13.19□□□□□ -0.3
OPTN-208ENST00000430081 MPHOSPH8Q99549 860 aa13.19□□□□□ -0.3
OPTN-208ENST00000430081 PDE4DIPQ5VU43 2346 aa13.18□□□□□ -0.3
OPTN-208ENST00000430081 MYO1BO43795 1136 aa13.18□□□□□ -0.3
OPTN-208ENST00000430081 IGKV5-2P06315 115 aa13.18□□□□□ -0.3
OPTN-208ENST00000430081 SUPT20HL1Q3ZLR7 823 aa13.18□□□□□ -0.3
OPTN-208ENST00000430081 HABP4Q5JVS0 413 aaKnown RBP13.18□□□□□ -0.3
OPTN-208ENST00000430081 WNK4Q96J92 1243 aa13.18□□□□□ -0.3
OPTN-208ENST00000430081 PPP2R3BQ9Y5P8 575 aa13.18□□□□□ -0.3
OPTN-208ENST00000430081 UNCXA6NJT0 531 aa13.17□□□□□ -0.3
OPTN-208ENST00000430081 DDX10Q13206 875 aaKnown RBP13.17□□□□□ -0.3
OPTN-208ENST00000430081 MAP3K11Q16584 847 aa13.17□□□□□ -0.3
OPTN-208ENST00000430081 ZBED3Q96IU2 234 aaPredicted RBP13.17□□□□□ -0.3
OPTN-208ENST00000430081 STK31Q9BXU1 1019 aa13.17□□□□□ -0.3
OPTN-208ENST00000430081 FZD1Q9UP38 647 aa13.17□□□□□ -0.3
OPTN-208ENST00000430081 COL1A1P02452 1464 aaPredicted RBP13.16□□□□□ -0.3
OPTN-208ENST00000430081 POTEFA5A3E0 1075 aa13.16□□□□□ -0.3
OPTN-208ENST00000430081 NEURL1BA8MQ27 555 aa13.16□□□□□ -0.3
OPTN-208ENST00000430081 H7C1W4 665 aa13.16□□□□□ -0.3
OPTN-208ENST00000430081 APAF1O14727 1248 aa13.16□□□□□ -0.3
OPTN-208ENST00000430081 ITGA6P23229 1130 aa13.16□□□□□ -0.3
OPTN-208ENST00000430081 CWF19L2Q2TBE0 894 aaKnown RBP13.16□□□□□ -0.3
OPTN-208ENST00000430081 UBE3BQ7Z3V4 1068 aa13.16□□□□□ -0.3
OPTN-208ENST00000430081 MTMR14Q8NCE2 650 aa13.16□□□□□ -0.3
OPTN-208ENST00000430081 EFCC1Q9HA90 598 aa13.16□□□□□ -0.3
OPTN-208ENST00000430081 CD209Q9NNX6 404 aa13.16□□□□□ -0.3
OPTN-208ENST00000430081 PTPN22Q9Y2R2 807 aa13.16□□□□□ -0.3
OPTN-208ENST00000430081 IGF2BP3O00425 579 aaKnown RBP eCLIP13.15□□□□□ -0.3
OPTN-208ENST00000430081 KLRK1P26718 216 aa13.15□□□□□ -0.3
OPTN-208ENST00000430081 IREB2P48200 963 aaKnown RBP13.15□□□□□ -0.3
OPTN-208ENST00000430081 CD99L2Q8TCZ2 262 aa13.15□□□□□ -0.3
OPTN-208ENST00000430081 CLMNQ96JQ2 1002 aa13.15□□□□□ -0.3
OPTN-208ENST00000430081 TMEM106CQ9BVX2 250 aa13.15□□□□□ -0.3
OPTN-208ENST00000430081 VEZTQ9HBM0 779 aa13.15□□□□□ -0.3
OPTN-208ENST00000430081 CLRN2A0PK11 232 aa13.14□□□□□ -0.31
OPTN-208ENST00000430081 F8W031 263 aaPredicted RBP13.14□□□□□ -0.31
OPTN-208ENST00000430081 SP3Q02447 781 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms