RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 ATP6V1AP38606 617 aa14.53□□□□□ -0.08
LDB3-205ENST00000429277 SPATA24Q86W54 205 aa14.53□□□□□ -0.08
LDB3-205ENST00000429277 ZFYVE9O95405 1425 aa14.53□□□□□ -0.08
LDB3-205ENST00000429277 THOC2Q8NI27 1593 aaKnown RBP14.53□□□□□ -0.08
LDB3-205ENST00000429277 MEIS3Q99687 375 aa14.52□□□□□ -0.08
LDB3-205ENST00000429277 FAM83GA6ND36 823 aa14.52□□□□□ -0.08
LDB3-205ENST00000429277 F13A1P00488 732 aa14.52□□□□□ -0.08
LDB3-205ENST00000429277 MRPL50Q8N5N7 158 aaKnown RBP14.52□□□□□ -0.08
LDB3-205ENST00000429277 PPIP5K1Q6PFW1 1433 aa14.52□□□□□ -0.09
LDB3-205ENST00000429277 RNF113AO15541 343 aaKnown RBP14.52□□□□□ -0.09
LDB3-205ENST00000429277 PPM1FP49593 454 aaPredicted RBP14.52□□□□□ -0.09
LDB3-205ENST00000429277 RBM28Q9NW13 759 aaKnown RBP14.52□□□□□ -0.09
LDB3-205ENST00000429277 A0A1W2PRG0 241 aa14.52□□□□□ -0.09
LDB3-205ENST00000429277 APBB1IPQ7Z5R6 666 aaPredicted RBP14.52□□□□□ -0.09
LDB3-205ENST00000429277 KIAA1524Q8TCG1 905 aa14.52□□□□□ -0.09
LDB3-205ENST00000429277 SPTLC2O15270 562 aa14.52□□□□□ -0.09
LDB3-205ENST00000429277 Q6ZUG5 572 aa14.52□□□□□ -0.09
LDB3-205ENST00000429277 HCLS1P14317 486 aaPredicted RBP14.51□□□□□ -0.09
LDB3-205ENST00000429277 ARFGAP3Q9NP61 516 aa14.51□□□□□ -0.09
LDB3-205ENST00000429277 KRT2P35908 639 aa14.51□□□□□ -0.09
LDB3-205ENST00000429277 SH2D4AQ9H788 454 aa14.51□□□□□ -0.09
LDB3-205ENST00000429277 KIF5AQ12840 1032 aa14.51□□□□□ -0.09
LDB3-205ENST00000429277 NIP7Q9Y221 180 aaKnown RBP eCLIP14.51□□□□□ -0.09
LDB3-205ENST00000429277 SKILP12757 684 aa14.5□□□□□ -0.09
LDB3-205ENST00000429277 AFMP43652 599 aa14.5□□□□□ -0.09
LDB3-205ENST00000429277 INTS4Q96HW7 963 aaKnown RBP14.5□□□□□ -0.09
LDB3-205ENST00000429277 RTL1A6NKG5 1358 aa14.5□□□□□ -0.09
LDB3-205ENST00000429277 DDB1Q16531 1140 aa14.5□□□□□ -0.09
LDB3-205ENST00000429277 CERS3Q8IU89 383 aa14.5□□□□□ -0.09
LDB3-205ENST00000429277 LARP6Q9BRS8 491 aaKnown RBP14.5□□□□□ -0.09
LDB3-205ENST00000429277 MYCNP04198 464 aaPredicted RBP14.5□□□□□ -0.09
LDB3-205ENST00000429277 IL2RBP14784 551 aa14.5□□□□□ -0.09
LDB3-205ENST00000429277 CBX1P83916 185 aa14.5□□□□□ -0.09
LDB3-205ENST00000429277 ANO6Q4KMQ2 910 aa14.5□□□□□ -0.09
LDB3-205ENST00000429277 ZC3H12CQ9C0D7 883 aaKnown RBP14.5□□□□□ -0.09
LDB3-205ENST00000429277 CEP83Q9Y592 693 aa14.5□□□□□ -0.09
LDB3-205ENST00000429277 CEBPAP49715 358 aaPredicted RBP14.5□□□□□ -0.09
LDB3-205ENST00000429277 BABAM1Q9NWV8 329 aa14.5□□□□□ -0.09
LDB3-205ENST00000429277 EIF2AK4Q9P2K8 1649 aaKnown RBP14.49□□□□□ -0.09
LDB3-205ENST00000429277 IGHDP01880 384 aa14.49□□□□□ -0.09
LDB3-205ENST00000429277 IVLP07476 585 aa14.49□□□□□ -0.09
LDB3-205ENST00000429277 URB2Q14146 1524 aaKnown RBP14.49□□□□□ -0.09
LDB3-205ENST00000429277 CHRNA2Q15822 529 aa14.49□□□□□ -0.09
LDB3-205ENST00000429277 GIMAP6Q6P9H5 292 aa14.49□□□□□ -0.09
LDB3-205ENST00000429277 FBF1Q8TES7 1133 aa14.49□□□□□ -0.09
LDB3-205ENST00000429277 CTAGE9A4FU28 777 aa14.49□□□□□ -0.09
LDB3-205ENST00000429277 FAM13AO94988 1023 aa14.49□□□□□ -0.09
LDB3-205ENST00000429277 RPL13P26373 211 aaKnown RBP14.49□□□□□ -0.09
LDB3-205ENST00000429277 DCAF5Q96JK2 942 aa14.49□□□□□ -0.09
LDB3-205ENST00000429277 NECAB1Q8N987 351 aa14.49□□□□□ -0.09
LDB3-205ENST00000429277 HSPA4P34932 840 aa14.48□□□□□ -0.09
LDB3-205ENST00000429277 TTC6Q86TZ1 520 aa14.48□□□□□ -0.09
LDB3-205ENST00000429277 DZIP3Q86Y13 1208 aaKnown RBP14.48□□□□□ -0.09
LDB3-205ENST00000429277 KRT222Q8N1A0 295 aa14.48□□□□□ -0.09
LDB3-205ENST00000429277 JAKMIP2Q96AA8 810 aa14.48□□□□□ -0.09
LDB3-205ENST00000429277 GLT8D2Q9H1C3 349 aa14.48□□□□□ -0.09
LDB3-205ENST00000429277 MAP3K5Q99683 1374 aa14.48□□□□□ -0.09
LDB3-205ENST00000429277 CCDC42Q96M95 316 aa14.48□□□□□ -0.09
LDB3-205ENST00000429277 TRPM2O94759 1503 aa14.48□□□□□ -0.09
LDB3-205ENST00000429277 DHX32Q7L7V1 743 aaKnown RBP14.48□□□□□ -0.09
LDB3-205ENST00000429277 IQUBQ8NA54 791 aa14.48□□□□□ -0.09
LDB3-205ENST00000429277 NEK11Q8NG66 645 aa14.48□□□□□ -0.09
LDB3-205ENST00000429277 DCTPP1Q9H773 170 aa14.48□□□□□ -0.09
LDB3-205ENST00000429277 DACT1Q9NYF0 836 aa14.48□□□□□ -0.09
LDB3-205ENST00000429277 STK24Q9Y6E0 443 aa14.48□□□□□ -0.09
LDB3-205ENST00000429277 ARFGAP2Q8N6H7 521 aa14.48□□□□□ -0.09
LDB3-205ENST00000429277 PKNOX2Q96KN3 472 aa14.48□□□□□ -0.09
LDB3-205ENST00000429277 MRVI1Q9Y6F6 885 aa14.48□□□□□ -0.09
LDB3-205ENST00000429277 PLCH2O75038 1416 aa14.47□□□□□ -0.09
LDB3-205ENST00000429277 RIMS2Q9UQ26 1411 aa14.47□□□□□ -0.09
LDB3-205ENST00000429277 USP48Q86UV5 1035 aa14.47□□□□□ -0.09
LDB3-205ENST00000429277 TCHPQ9BT92 498 aa14.47□□□□□ -0.09
LDB3-205ENST00000429277 CDCA7Q9BWT1 371 aaPredicted RBP14.47□□□□□ -0.09
LDB3-205ENST00000429277 ATP2A2P16615 1042 aaKnown RBP14.47□□□□□ -0.09
LDB3-205ENST00000429277 TNNI2P48788 182 aa14.47□□□□□ -0.09
LDB3-205ENST00000429277 NMIQ13287 307 aaPredicted RBP14.47□□□□□ -0.09
LDB3-205ENST00000429277 HS1BP3Q53T59 392 aa14.47□□□□□ -0.09
LDB3-205ENST00000429277 ISM2Q6H9L7 571 aa14.47□□□□□ -0.09
LDB3-205ENST00000429277 RAB11FIP4Q86YS3 637 aa14.47□□□□□ -0.09
LDB3-205ENST00000429277 RTCBQ9Y3I0 505 aaKnown RBP14.47□□□□□ -0.09
LDB3-205ENST00000429277 A2MP01023 1474 aa14.47□□□□□ -0.09
LDB3-205ENST00000429277 CEP128Q6ZU80 1094 aa14.47□□□□□ -0.09
LDB3-205ENST00000429277 HELLSQ9NRZ9 838 aa14.47□□□□□ -0.09
LDB3-205ENST00000429277 TSHZ3Q63HK5 1081 aa14.47□□□□□ -0.09
LDB3-205ENST00000429277 MMRN2Q9H8L6 949 aa14.47□□□□□ -0.09
LDB3-205ENST00000429277 CNPY2Q9Y2B0 182 aa14.47□□□□□ -0.09
LDB3-205ENST00000429277 ANXA1P04083 346 aa14.46□□□□□ -0.09
LDB3-205ENST00000429277 SYT1P21579 422 aa14.46□□□□□ -0.09
LDB3-205ENST00000429277 EIF4A2Q14240 407 aaKnown RBP14.46□□□□□ -0.09
LDB3-205ENST00000429277 DTHD1Q6ZMT9 781 aa14.46□□□□□ -0.09
LDB3-205ENST00000429277 TSGA10Q9BZW7 698 aa14.46□□□□□ -0.09
LDB3-205ENST00000429277 TMX1Q9H3N1 280 aa14.46□□□□□ -0.09
LDB3-205ENST00000429277 GTF2F1P35269 517 aaKnown RBP eCLIP14.46□□□□□ -0.09
LDB3-205ENST00000429277 CCDC14Q49A88 953 aa14.46□□□□□ -0.09
LDB3-205ENST00000429277 RAB3IL1Q8TBN0 382 aa14.46□□□□□ -0.09
LDB3-205ENST00000429277 GOLGA1Q92805 767 aa14.46□□□□□ -0.09
LDB3-205ENST00000429277 AOPEPQ8N6M6 819 aa14.46□□□□□ -0.09
LDB3-205ENST00000429277 ANKS4BQ8N8V4 417 aa14.46□□□□□ -0.09
LDB3-205ENST00000429277 DENND2AQ9ULE3 1009 aa14.46□□□□□ -0.09
LDB3-205ENST00000429277 WDR7Q9Y4E6 1490 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms