RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 CTNNA3Q9UI47 895 aa16.21■□□□□ 0.19
THBS3-202ENST00000428962 ELP1O95163 1332 aa16.2■□□□□ 0.18
THBS3-202ENST00000428962 STK3Q13188 491 aa16.2■□□□□ 0.18
THBS3-202ENST00000428962 COL9A3Q14050 684 aaPredicted RBP16.2■□□□□ 0.18
THBS3-202ENST00000428962 ATP2B3Q16720 1220 aa16.2■□□□□ 0.18
THBS3-202ENST00000428962 METTL24Q5JXM2 366 aa16.2■□□□□ 0.18
THBS3-202ENST00000428962 CDC37L1Q7L3B6 337 aa16.2■□□□□ 0.18
THBS3-202ENST00000428962 PDLIM2Q96JY6 352 aa16.2■□□□□ 0.18
THBS3-202ENST00000428962 LAMA4Q16363 1823 aa16.19■□□□□ 0.18
THBS3-202ENST00000428962 ITGA6P23229 1130 aa16.19■□□□□ 0.18
THBS3-202ENST00000428962 HLFQ16534 295 aa16.19■□□□□ 0.18
THBS3-202ENST00000428962 TTLL11Q8NHH1 800 aa16.19■□□□□ 0.18
THBS3-202ENST00000428962 SYTL4Q96C24 671 aaPredicted RBP16.19■□□□□ 0.18
THBS3-202ENST00000428962 ZBTB1Q9Y2K1 713 aa16.19■□□□□ 0.18
THBS3-202ENST00000428962 KIF3AQ9Y496 699 aa16.19■□□□□ 0.18
THBS3-202ENST00000428962 IRS4O14654 1257 aaPredicted RBP16.19■□□□□ 0.18
THBS3-202ENST00000428962 PDE8AO60658 829 aa16.19■□□□□ 0.18
THBS3-202ENST00000428962 GPTP24298 496 aa16.19■□□□□ 0.18
THBS3-202ENST00000428962 ADORA1P30542 326 aa16.19■□□□□ 0.18
THBS3-202ENST00000428962 LDHAL6AQ6ZMR3 332 aa16.19■□□□□ 0.18
THBS3-202ENST00000428962 BRF1Q92994 677 aa16.19■□□□□ 0.18
THBS3-202ENST00000428962 GJD4Q96KN9 370 aaPredicted RBP16.19■□□□□ 0.18
THBS3-202ENST00000428962 AK7Q96M32 723 aa16.19■□□□□ 0.18
THBS3-202ENST00000428962 CCDC85AQ96PX6 553 aaPredicted RBP16.19■□□□□ 0.18
THBS3-202ENST00000428962 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.19■□□□□ 0.18
THBS3-202ENST00000428962 SCAND2PQ9GZW5 306 aaPredicted RBP16.19■□□□□ 0.18
THBS3-202ENST00000428962 TRMT112Q9UI30 125 aaKnown RBP16.19■□□□□ 0.18
THBS3-202ENST00000428962 THRAP3Q9Y2W1 955 aaKnown RBP16.19■□□□□ 0.18
THBS3-202ENST00000428962 NUP98P52948 1817 aa16.18■□□□□ 0.18
THBS3-202ENST00000428962 PFKFB2O60825 505 aa16.18■□□□□ 0.18
THBS3-202ENST00000428962 ZSCAN25Q6NSZ9 544 aa16.18■□□□□ 0.18
THBS3-202ENST00000428962 STOX1Q6ZVD7 989 aa16.18■□□□□ 0.18
THBS3-202ENST00000428962 ZSCAN30Q86W11 494 aa16.18■□□□□ 0.18
THBS3-202ENST00000428962 DZIP3Q86Y13 1208 aaKnown RBP16.18■□□□□ 0.18
THBS3-202ENST00000428962 ZNF512BQ96KM6 892 aaPredicted RBP16.18■□□□□ 0.18
THBS3-202ENST00000428962 SLC4A9Q96Q91 983 aa16.18■□□□□ 0.18
THBS3-202ENST00000428962 RIPOR2Q9Y4F9 1068 aa16.18■□□□□ 0.18
THBS3-202ENST00000428962 LRP5O75197 1615 aa16.18■□□□□ 0.18
THBS3-202ENST00000428962 E7EWF7 191 aa16.17■□□□□ 0.18
THBS3-202ENST00000428962 M0R2C6 588 aa16.17■□□□□ 0.18
THBS3-202ENST00000428962 HMGN5P82970 282 aaKnown RBP16.17■□□□□ 0.18
THBS3-202ENST00000428962 UVSSAQ2YD98 709 aa16.17■□□□□ 0.18
THBS3-202ENST00000428962 APPBP2Q92624 585 aa16.17■□□□□ 0.18
THBS3-202ENST00000428962 AGXT2Q9BYV1 514 aa16.17■□□□□ 0.18
THBS3-202ENST00000428962 GREM2Q9H772 168 aa16.17■□□□□ 0.18
THBS3-202ENST00000428962 ANO8Q9HCE9 1232 aaPredicted RBP16.17■□□□□ 0.18
THBS3-202ENST00000428962 CNNM1Q9NRU3 951 aa16.17■□□□□ 0.18
THBS3-202ENST00000428962 NRAPQ86VF7 1730 aa16.17■□□□□ 0.18
THBS3-202ENST00000428962 MYH7P12883 1935 aa16.17■□□□□ 0.18
THBS3-202ENST00000428962 EXOSC10Q01780 885 aaKnown RBP16.17■□□□□ 0.18
THBS3-202ENST00000428962 TTF1Q15361 905 aaPredicted RBP16.17■□□□□ 0.18
THBS3-202ENST00000428962 WASHC4Q2M389 1173 aa16.17■□□□□ 0.18
THBS3-202ENST00000428962 IMMTQ16891 758 aaKnown RBP16.16■□□□□ 0.18
THBS3-202ENST00000428962 RNF214Q8ND24 703 aa16.16■□□□□ 0.18
THBS3-202ENST00000428962 OSBP2Q969R2 916 aa16.16■□□□□ 0.18
THBS3-202ENST00000428962 ZSCAN16Q9H4T2 348 aaPredicted RBP16.16■□□□□ 0.18
THBS3-202ENST00000428962 CICQ96RK0 1608 aaPredicted RBP16.15■□□□□ 0.18
THBS3-202ENST00000428962 H3BQV1 296 aa16.15■□□□□ 0.18
THBS3-202ENST00000428962 MSNP26038 577 aaKnown RBP16.15■□□□□ 0.18
THBS3-202ENST00000428962 ZAP70P43403 619 aa16.15■□□□□ 0.18
THBS3-202ENST00000428962 SCRN1Q12765 414 aa16.15■□□□□ 0.18
THBS3-202ENST00000428962 VPS72Q15906 364 aa16.15■□□□□ 0.18
THBS3-202ENST00000428962 SLFNL1Q499Z3 407 aa16.15■□□□□ 0.18
THBS3-202ENST00000428962 IFFO2Q5TF58 517 aa16.15■□□□□ 0.18
THBS3-202ENST00000428962 FERMT3Q86UX7 667 aa16.15■□□□□ 0.18
THBS3-202ENST00000428962 FBXL16Q8N461 479 aa16.15■□□□□ 0.18
THBS3-202ENST00000428962 SMARCC2Q8TAQ2 1214 aa16.15■□□□□ 0.18
THBS3-202ENST00000428962 JAK2O60674 1132 aa16.15■□□□□ 0.18
THBS3-202ENST00000428962 ZNF34Q8IZ26 560 aa16.15■□□□□ 0.18
THBS3-202ENST00000428962 ARAP2Q8WZ64 1704 aa16.14■□□□□ 0.17
THBS3-202ENST00000428962 SPATA31A1Q5TZJ5 1347 aa16.14■□□□□ 0.17
THBS3-202ENST00000428962 MROH5Q6ZUA9 1318 aa16.14■□□□□ 0.17
THBS3-202ENST00000428962 RREB1Q92766 1687 aa16.14■□□□□ 0.17
THBS3-202ENST00000428962 UQCRFS1P1P0C7P4 283 aa16.14■□□□□ 0.17
THBS3-202ENST00000428962 DDB1Q16531 1140 aa16.14■□□□□ 0.17
THBS3-202ENST00000428962 TTC6Q86TZ1 520 aa16.14■□□□□ 0.17
THBS3-202ENST00000428962 ZNF274Q96GC6 653 aaPredicted RBP16.14■□□□□ 0.17
THBS3-202ENST00000428962 LRRC2Q9BYS8 371 aa16.14■□□□□ 0.17
THBS3-202ENST00000428962 CCDC39Q9UFE4 941 aa16.14■□□□□ 0.17
THBS3-202ENST00000428962 GOLGA6L4A6NEF3 574 aa16.13■□□□□ 0.17
THBS3-202ENST00000428962 DTNBO60941 627 aa16.13■□□□□ 0.17
THBS3-202ENST00000428962 PDE8BO95263 885 aa16.13■□□□□ 0.17
THBS3-202ENST00000428962 SCARF1Q14162 830 aa16.13■□□□□ 0.17
THBS3-202ENST00000428962 NAA16Q6N069 864 aaPredicted RBP16.13■□□□□ 0.17
THBS3-202ENST00000428962 SYNE4Q8N205 404 aa16.13■□□□□ 0.17
THBS3-202ENST00000428962 VGLL2Q8N8G2 317 aa16.13■□□□□ 0.17
THBS3-202ENST00000428962 SPATA32Q96LK8 384 aa16.13■□□□□ 0.17
THBS3-202ENST00000428962 CCDC87Q9NVE4 849 aa16.13■□□□□ 0.17
THBS3-202ENST00000428962 TBC1D2BQ9UPU7 963 aa16.13■□□□□ 0.17
THBS3-202ENST00000428962 UBN2Q6ZU65 1347 aa16.13■□□□□ 0.17
THBS3-202ENST00000428962 APOBRQ0VD83 1088 aa16.12■□□□□ 0.17
THBS3-202ENST00000428962 RESTQ13127 1097 aa16.12■□□□□ 0.17
THBS3-202ENST00000428962 PUM3Q15397 648 aaKnown RBP16.12■□□□□ 0.17
THBS3-202ENST00000428962 NSUN7Q8NE18 718 aaKnown RBP16.12■□□□□ 0.17
THBS3-202ENST00000428962 UPF1Q92900 1129 aaKnown RBP eCLIP16.12■□□□□ 0.17
THBS3-202ENST00000428962 CFAP45Q9UL16 551 aa16.12■□□□□ 0.17
THBS3-202ENST00000428962 PTPDC1A2A3K4 754 aa16.12■□□□□ 0.17
THBS3-202ENST00000428962 MCAMP43121 646 aa16.12■□□□□ 0.17
THBS3-202ENST00000428962 EIF5P55010 431 aaKnown RBP16.12■□□□□ 0.17
THBS3-202ENST00000428962 NWD2Q9ULI1 1742 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms