RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 ZBTB38Q8NAP3 1195 aaPredicted RBP13.42□□□□□ -0.26
RDH11-202ENST00000428130 HOXB7P09629 217 aa13.41□□□□□ -0.26
RDH11-202ENST00000428130 SPRYD7Q5W111 196 aa13.41□□□□□ -0.26
RDH11-202ENST00000428130 INTS3Q68E01 1043 aaKnown RBP13.41□□□□□ -0.26
RDH11-202ENST00000428130 TRIM17Q9Y577 477 aa13.41□□□□□ -0.26
RDH11-202ENST00000428130 MED23Q9ULK4 1368 aa13.41□□□□□ -0.26
RDH11-202ENST00000428130 OTOFQ9HC10 1997 aa13.4□□□□□ -0.26
RDH11-202ENST00000428130 WTIPA6NIX2 430 aaPredicted RBP13.4□□□□□ -0.26
RDH11-202ENST00000428130 ALDH1A1P00352 501 aa13.4□□□□□ -0.26
RDH11-202ENST00000428130 ATP2B4P23634 1241 aa13.4□□□□□ -0.26
RDH11-202ENST00000428130 FXR1P51114 621 aaKnown RBP eCLIP13.4□□□□□ -0.26
RDH11-202ENST00000428130 CCDC152Q4G0S7 254 aa13.4□□□□□ -0.26
RDH11-202ENST00000428130 DACT2Q5SW24 774 aa13.4□□□□□ -0.26
RDH11-202ENST00000428130 LDLRAD1Q5T700 205 aa13.4□□□□□ -0.26
RDH11-202ENST00000428130 OTOP1Q7RTM1 612 aa13.4□□□□□ -0.26
RDH11-202ENST00000428130 MXD3Q9BW11 206 aa13.4□□□□□ -0.26
RDH11-202ENST00000428130 HYPKQ9NX55 129 aa13.4□□□□□ -0.26
RDH11-202ENST00000428130 PDE8AO60658 829 aa13.39□□□□□ -0.27
RDH11-202ENST00000428130 SASH1O94885 1247 aa13.39□□□□□ -0.27
RDH11-202ENST00000428130 HSP90B1P14625 803 aaKnown RBP13.39□□□□□ -0.27
RDH11-202ENST00000428130 PRKG1Q13976 671 aa13.39□□□□□ -0.27
RDH11-202ENST00000428130 ARMC9Q7Z3E5 817 aa13.39□□□□□ -0.27
RDH11-202ENST00000428130 OGFOD1Q8N543 542 aa13.39□□□□□ -0.27
RDH11-202ENST00000428130 CCDC85AQ96PX6 553 aaPredicted RBP13.39□□□□□ -0.27
RDH11-202ENST00000428130 COL1A1P02452 1464 aaPredicted RBP13.39□□□□□ -0.27
RDH11-202ENST00000428130 MYO3BQ8WXR4 1341 aa13.39□□□□□ -0.27
RDH11-202ENST00000428130 A0A1B0GUL6 1792 aa13.38□□□□□ -0.27
RDH11-202ENST00000428130 PCCAP05165 728 aaPredicted RBP13.38□□□□□ -0.27
RDH11-202ENST00000428130 RIC3Q7Z5B4 369 aa13.38□□□□□ -0.27
RDH11-202ENST00000428130 IFNL1Q8IU54 200 aa13.38□□□□□ -0.27
RDH11-202ENST00000428130 ANKRD18AQ8IVF6 992 aa13.38□□□□□ -0.27
RDH11-202ENST00000428130 ANGEL1Q9UNK9 670 aaKnown RBP13.38□□□□□ -0.27
RDH11-202ENST00000428130 FZD1Q9UP38 647 aa13.38□□□□□ -0.27
RDH11-202ENST00000428130 LAS1LQ9Y4W2 734 aaKnown RBP13.38□□□□□ -0.27
RDH11-202ENST00000428130 SSC5DA1L4H1 1573 aa13.37□□□□□ -0.27
RDH11-202ENST00000428130 CEP290O15078 2479 aa13.37□□□□□ -0.27
RDH11-202ENST00000428130 MANSC4A6NHS7 340 aaPredicted RBP13.37□□□□□ -0.27
RDH11-202ENST00000428130 IGF2BP3O00425 579 aaKnown RBP eCLIP13.37□□□□□ -0.27
RDH11-202ENST00000428130 INHBEP58166 350 aa13.37□□□□□ -0.27
RDH11-202ENST00000428130 NEUROD2Q15784 382 aa13.37□□□□□ -0.27
RDH11-202ENST00000428130 STRIP1Q5VSL9 837 aa13.37□□□□□ -0.27
RDH11-202ENST00000428130 APOBEC3FQ8IUX4 373 aaKnown RBP13.37□□□□□ -0.27
RDH11-202ENST00000428130 CCDC191Q8NCU4 936 aa13.37□□□□□ -0.27
RDH11-202ENST00000428130 MYD88Q99836 296 aa13.37□□□□□ -0.27
RDH11-202ENST00000428130 TRIM35Q9UPQ4 493 aa13.37□□□□□ -0.27
RDH11-202ENST00000428130 PTPN22Q9Y2R2 807 aa13.37□□□□□ -0.27
RDH11-202ENST00000428130 ZBTB48P10074 688 aaPredicted RBP13.36□□□□□ -0.27
RDH11-202ENST00000428130 MMP14P50281 582 aa13.36□□□□□ -0.27
RDH11-202ENST00000428130 GOLGA2Q08379 1002 aa13.36□□□□□ -0.27
RDH11-202ENST00000428130 MAP3K11Q16584 847 aa13.36□□□□□ -0.27
RDH11-202ENST00000428130 JARID2Q92833 1246 aaPredicted RBP13.36□□□□□ -0.27
RDH11-202ENST00000428130 FBXW7Q969H0 707 aa13.36□□□□□ -0.27
RDH11-202ENST00000428130 ARMC5Q96C12 935 aa13.36□□□□□ -0.27
RDH11-202ENST00000428130 ZBED3Q96IU2 234 aaPredicted RBP13.36□□□□□ -0.27
RDH11-202ENST00000428130 PHAXQ9H814 394 aaKnown RBP13.36□□□□□ -0.27
RDH11-202ENST00000428130 RANBP2P49792 3224 aaKnown RBP13.35□□□□□ -0.27
RDH11-202ENST00000428130 EN2P19622 333 aaPredicted RBP13.35□□□□□ -0.27
RDH11-202ENST00000428130 CCT4P50991 539 aaKnown RBP13.35□□□□□ -0.27
RDH11-202ENST00000428130 DUSP27Q5VZP5 1158 aa13.35□□□□□ -0.27
RDH11-202ENST00000428130 CD99L2Q8TCZ2 262 aa13.35□□□□□ -0.27
RDH11-202ENST00000428130 ERO1AQ96HE7 468 aa13.35□□□□□ -0.27
RDH11-202ENST00000428130 WNK4Q96J92 1243 aa13.35□□□□□ -0.27
RDH11-202ENST00000428130 CWC25Q9NXE8 425 aaPredicted RBP13.35□□□□□ -0.27
RDH11-202ENST00000428130 MINPP1Q9UNW1 487 aa13.35□□□□□ -0.27
RDH11-202ENST00000428130 TRIOBPQ9H2D6 2365 aa13.34□□□□□ -0.27
RDH11-202ENST00000428130 TXNRD3Q86VQ6 643 aa13.34□□□□□ -0.27
RDH11-202ENST00000428130 KIAA0825Q8IV33 1275 aa13.34□□□□□ -0.27
RDH11-202ENST00000428130 CCDC146Q8IYE0 955 aa13.34□□□□□ -0.27
RDH11-202ENST00000428130 SLC10A4Q96EP9 437 aa13.34□□□□□ -0.27
RDH11-202ENST00000428130 CLMNQ96JQ2 1002 aa13.34□□□□□ -0.27
RDH11-202ENST00000428130 CDC5LQ99459 802 aaKnown RBP13.34□□□□□ -0.27
RDH11-202ENST00000428130 COA1Q9GZY4 146 aa13.34□□□□□ -0.27
RDH11-202ENST00000428130 BSDC1Q9NW68 430 aaPredicted RBP13.34□□□□□ -0.27
RDH11-202ENST00000428130 ZSWIM8A7E2V4 1837 aa13.34□□□□□ -0.27
RDH11-202ENST00000428130 CTSWP56202 376 aa13.33□□□□□ -0.28
RDH11-202ENST00000428130 CAP1Q01518 475 aa13.33□□□□□ -0.28
RDH11-202ENST00000428130 CRHR2Q13324 411 aa13.33□□□□□ -0.28
RDH11-202ENST00000428130 TTLL5Q6EMB2 1281 aa13.33□□□□□ -0.28
RDH11-202ENST00000428130 DEFB129Q9H1M3 183 aa13.33□□□□□ -0.28
RDH11-202ENST00000428130 COLQQ9Y215 455 aaPredicted RBP13.33□□□□□ -0.28
RDH11-202ENST00000428130 TTLL11Q8NHH1 800 aa13.32□□□□□ -0.28
RDH11-202ENST00000428130 METTL22Q9BUU2 404 aaPredicted RBP13.32□□□□□ -0.28
RDH11-202ENST00000428130 GREM2Q9H772 168 aa13.32□□□□□ -0.28
RDH11-202ENST00000428130 EFCC1Q9HA90 598 aa13.32□□□□□ -0.28
RDH11-202ENST00000428130 MBIPQ9NS73 344 aa13.32□□□□□ -0.28
RDH11-202ENST00000428130 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.32□□□□□ -0.28
RDH11-202ENST00000428130 UNCXA6NJT0 531 aa13.31□□□□□ -0.28
RDH11-202ENST00000428130 PPP1R12BO60237 982 aaPredicted RBP13.31□□□□□ -0.28
RDH11-202ENST00000428130 KLRK1P26718 216 aa13.31□□□□□ -0.28
RDH11-202ENST00000428130 GJA5P36382 358 aa13.31□□□□□ -0.28
RDH11-202ENST00000428130 ZNF333Q96JL9 665 aa13.31□□□□□ -0.28
RDH11-202ENST00000428130 LEMD3Q9Y2U8 911 aa13.31□□□□□ -0.28
RDH11-202ENST00000428130 COL6A3P12111 3177 aa13.31□□□□□ -0.28
RDH11-202ENST00000428130 ARAP2Q8WZ64 1704 aa13.3□□□□□ -0.28
RDH11-202ENST00000428130 GTF2IP78347 998 aa13.3□□□□□ -0.28
RDH11-202ENST00000428130 SP3Q02447 781 aa13.3□□□□□ -0.28
RDH11-202ENST00000428130 OTUD7BQ6GQQ9 843 aa13.3□□□□□ -0.28
RDH11-202ENST00000428130 MTMR14Q8NCE2 650 aa13.3□□□□□ -0.28
RDH11-202ENST00000428130 RUNDC1Q96C34 613 aa13.3□□□□□ -0.28
RDH11-202ENST00000428130 PTPN18Q99952 460 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms