RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 TBC1D9BQ66K14 1250 aa25.99■■□□□ 1.75
CNEP1R1-202ENST00000427478 SEPT12Q8IYM1 358 aa25.99■■□□□ 1.75
CNEP1R1-202ENST00000427478 TCEANC2Q96MN5 208 aa25.99■■□□□ 1.75
CNEP1R1-202ENST00000427478 BCL2L12Q9HB09 334 aa25.99■■□□□ 1.75
CNEP1R1-202ENST00000427478 CYP21A2P08686 494 aa25.99■■□□□ 1.75
CNEP1R1-202ENST00000427478 PTMSP20962 102 aa25.99■■□□□ 1.75
CNEP1R1-202ENST00000427478 FGFR2P21802 821 aa25.99■■□□□ 1.75
CNEP1R1-202ENST00000427478 IGHMBP2P38935 993 aaKnown RBP25.99■■□□□ 1.75
CNEP1R1-202ENST00000427478 PHKA1P46020 1223 aa25.99■■□□□ 1.75
CNEP1R1-202ENST00000427478 KRT32Q14532 448 aa25.99■■□□□ 1.75
CNEP1R1-202ENST00000427478 ZNF512BQ96KM6 892 aaPredicted RBP25.99■■□□□ 1.75
CNEP1R1-202ENST00000427478 SRP68Q9UHB9 627 aaKnown RBP25.99■■□□□ 1.75
CNEP1R1-202ENST00000427478 CCDC102BQ68D86 513 aa25.98■■□□□ 1.75
CNEP1R1-202ENST00000427478 OSBP2Q969R2 916 aa25.98■■□□□ 1.75
CNEP1R1-202ENST00000427478 DSCC1Q9BVC3 393 aa25.98■■□□□ 1.75
CNEP1R1-202ENST00000427478 GZF1Q9H116 711 aaPredicted RBP25.98■■□□□ 1.75
CNEP1R1-202ENST00000427478 MCTP1Q6DN14 999 aa25.97■■□□□ 1.75
CNEP1R1-202ENST00000427478 NARFQ9UHQ1 456 aa25.97■■□□□ 1.75
CNEP1R1-202ENST00000427478 TAF1P21675 1872 aa25.97■■□□□ 1.75
CNEP1R1-202ENST00000427478 COL24A1Q17RW2 1714 aa25.97■■□□□ 1.75
CNEP1R1-202ENST00000427478 ONECUT3O60422 494 aaPredicted RBP25.97■■□□□ 1.75
CNEP1R1-202ENST00000427478 BRD1O95696 1058 aa25.97■■□□□ 1.75
CNEP1R1-202ENST00000427478 ZFYP08048 801 aaPredicted RBP25.97■■□□□ 1.75
CNEP1R1-202ENST00000427478 WASHC4Q2M389 1173 aa25.97■■□□□ 1.75
CNEP1R1-202ENST00000427478 CCDC83Q8IWF9 413 aa25.97■■□□□ 1.75
CNEP1R1-202ENST00000427478 ZSCAN31Q96LW9 406 aaPredicted RBP25.97■■□□□ 1.75
CNEP1R1-202ENST00000427478 C4BP0C0L5 1744 aa25.97■■□□□ 1.75
CNEP1R1-202ENST00000427478 SNAP23O00161 211 aa25.96■■□□□ 1.75
CNEP1R1-202ENST00000427478 HSPD1P10809 573 aaKnown RBP25.96■■□□□ 1.75
CNEP1R1-202ENST00000427478 SLC5A1P13866 664 aa25.96■■□□□ 1.75
CNEP1R1-202ENST00000427478 SH2B1Q9NRF2 756 aaPredicted RBP25.96■■□□□ 1.75
CNEP1R1-202ENST00000427478 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.96■■□□□ 1.75
CNEP1R1-202ENST00000427478 C4AP0C0L4 1744 aa25.96■■□□□ 1.75
CNEP1R1-202ENST00000427478 C3orf67Q6ZVT6 689 aa25.96■■□□□ 1.75
CNEP1R1-202ENST00000427478 TPCN1Q9ULQ1 816 aa25.96■■□□□ 1.75
CNEP1R1-202ENST00000427478 A0A1B0GUL6 1792 aa25.95■■□□□ 1.75
CNEP1R1-202ENST00000427478 ARID4AP29374 1257 aaPredicted RBP25.95■■□□□ 1.74
CNEP1R1-202ENST00000427478 ME3Q16798 604 aa25.95■■□□□ 1.74
CNEP1R1-202ENST00000427478 NEK1Q96PY6 1258 aa25.95■■□□□ 1.74
CNEP1R1-202ENST00000427478 RTCBQ9Y3I0 505 aaKnown RBP25.95■■□□□ 1.74
CNEP1R1-202ENST00000427478 RGL2O15211 777 aa25.94■■□□□ 1.74
CNEP1R1-202ENST00000427478 UQCRFS1P1P0C7P4 283 aa25.94■■□□□ 1.74
CNEP1R1-202ENST00000427478 AMIGO3Q86WK7 504 aa25.94■■□□□ 1.74
CNEP1R1-202ENST00000427478 ZPR1O75312 459 aa25.94■■□□□ 1.74
CNEP1R1-202ENST00000427478 GTF2E1P29083 439 aaPredicted RBP25.94■■□□□ 1.74
CNEP1R1-202ENST00000427478 APPBP2Q92624 585 aa25.94■■□□□ 1.74
CNEP1R1-202ENST00000427478 ANKRD1Q15327 319 aa25.93■■□□□ 1.74
CNEP1R1-202ENST00000427478 CDC5LQ99459 802 aaKnown RBP25.93■■□□□ 1.74
CNEP1R1-202ENST00000427478 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.93■■□□□ 1.74
CNEP1R1-202ENST00000427478 SMC3Q9UQE7 1217 aa25.93■■□□□ 1.74
CNEP1R1-202ENST00000427478 ST3GAL1Q11201 340 aa25.93■■□□□ 1.74
CNEP1R1-202ENST00000427478 TOB2Q14106 344 aaPredicted RBP25.93■■□□□ 1.74
CNEP1R1-202ENST00000427478 CHAMP1Q96JM3 812 aa25.93■■□□□ 1.74
CNEP1R1-202ENST00000427478 ALDH8A1Q9H2A2 487 aaPredicted RBP25.93■■□□□ 1.74
CNEP1R1-202ENST00000427478 PIH1D3Q9NQM4 214 aaKnown RBP25.93■■□□□ 1.74
CNEP1R1-202ENST00000427478 TTF1Q15361 905 aaPredicted RBP25.92■■□□□ 1.74
CNEP1R1-202ENST00000427478 SKOR2Q2VWA4 1001 aaPredicted RBP25.92■■□□□ 1.74
CNEP1R1-202ENST00000427478 STOX1Q6ZVD7 989 aa25.92■■□□□ 1.74
CNEP1R1-202ENST00000427478 NECAB1Q8N987 351 aa25.92■■□□□ 1.74
CNEP1R1-202ENST00000427478 A0A0G2JLW4 131 aa25.91■■□□□ 1.74
CNEP1R1-202ENST00000427478 CHRNDQ07001 517 aa25.91■■□□□ 1.74
CNEP1R1-202ENST00000427478 SETDB2Q96T68 719 aa25.91■■□□□ 1.74
CNEP1R1-202ENST00000427478 PUS7LQ9H0K6 701 aaKnown RBP25.91■■□□□ 1.74
CNEP1R1-202ENST00000427478 SF3B3Q15393 1217 aaKnown RBP25.91■■□□□ 1.74
CNEP1R1-202ENST00000427478 ARHGEF1Q92888 912 aaKnown RBP25.91■■□□□ 1.74
CNEP1R1-202ENST00000427478 QTRT2Q9H974 415 aaKnown RBP25.91■■□□□ 1.74
CNEP1R1-202ENST00000427478 DOCK2Q92608 1830 aa25.9■■□□□ 1.74
CNEP1R1-202ENST00000427478 BRWD3Q6RI45 1802 aa25.9■■□□□ 1.74
CNEP1R1-202ENST00000427478 IDH1O75874 414 aaKnown RBP25.9■■□□□ 1.74
CNEP1R1-202ENST00000427478 ZSCAN25Q6NSZ9 544 aa25.9■■□□□ 1.74
CNEP1R1-202ENST00000427478 ANKRD18AQ8IVF6 992 aa25.9■■□□□ 1.74
CNEP1R1-202ENST00000427478 NYXQ9GZU5 481 aa25.9■■□□□ 1.74
CNEP1R1-202ENST00000427478 WDR33Q9C0J8 1336 aaKnown RBP25.89■■□□□ 1.74
CNEP1R1-202ENST00000427478 DTNBO60941 627 aa25.89■■□□□ 1.74
CNEP1R1-202ENST00000427478 PHF14O94880 888 aa25.89■■□□□ 1.74
CNEP1R1-202ENST00000427478 ADD2P35612 726 aa25.89■■□□□ 1.74
CNEP1R1-202ENST00000427478 SLC9C2Q5TAH2 1124 aa25.88■■□□□ 1.73
CNEP1R1-202ENST00000427478 NBPF5PQ86XG9 351 aaPredicted RBP25.88■■□□□ 1.73
CNEP1R1-202ENST00000427478 FOXP2O15409 715 aa25.88■■□□□ 1.73
CNEP1R1-202ENST00000427478 GJB2P29033 226 aa25.88■■□□□ 1.73
CNEP1R1-202ENST00000427478 TTLL5Q6EMB2 1281 aa25.88■■□□□ 1.73
CNEP1R1-202ENST00000427478 SPATA5Q8NB90 893 aa25.88■■□□□ 1.73
CNEP1R1-202ENST00000427478 BCL11BQ9C0K0 894 aaPredicted RBP25.88■■□□□ 1.73
CNEP1R1-202ENST00000427478 GPAA1O43292 621 aa25.87■■□□□ 1.73
CNEP1R1-202ENST00000427478 RASGRF1Q13972 1273 aa25.87■■□□□ 1.73
CNEP1R1-202ENST00000427478 SLC10A5Q5PT55 438 aa25.87■■□□□ 1.73
CNEP1R1-202ENST00000427478 Q6ZUG5 572 aa25.87■■□□□ 1.73
CNEP1R1-202ENST00000427478 LMBRD1Q9NUN5 540 aa25.87■■□□□ 1.73
CNEP1R1-202ENST00000427478 DDX49Q9Y6V7 483 aaKnown RBP25.86■■□□□ 1.73
CNEP1R1-202ENST00000427478 E7EWF7 191 aa25.85■■□□□ 1.73
CNEP1R1-202ENST00000427478 SYT1P21579 422 aa25.85■■□□□ 1.73
CNEP1R1-202ENST00000427478 BCAMP50895 628 aa25.85■■□□□ 1.73
CNEP1R1-202ENST00000427478 FAM196AQ6ZSG2 479 aa25.85■■□□□ 1.73
CNEP1R1-202ENST00000427478 CCDC24Q8N4L8 307 aa25.85■■□□□ 1.73
CNEP1R1-202ENST00000427478 LRRC4BQ9NT99 713 aa25.85■■□□□ 1.73
CNEP1R1-202ENST00000427478 WWC3Q9ULE0 1092 aa25.85■■□□□ 1.73
CNEP1R1-202ENST00000427478 ZNF532Q9HCE3 1301 aa25.85■■□□□ 1.73
CNEP1R1-202ENST00000427478 HMGB1P09429 215 aaKnown RBP25.85■■□□□ 1.73
CNEP1R1-202ENST00000427478 RFC4P35249 363 aa25.85■■□□□ 1.73
CNEP1R1-202ENST00000427478 LRRC2Q9BYS8 371 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 132.6 ms