RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 RRAGBQ5VZM2 374 aa22.58■■□□□ 1.21
HCG18-235ENST00000426882 TNIP1Q15025 636 aa22.58■■□□□ 1.2
HCG18-235ENST00000426882 TAF3Q5VWG9 929 aa22.58■■□□□ 1.2
HCG18-235ENST00000426882 UTP14AQ9BVJ6 771 aaKnown RBP22.58■■□□□ 1.2
HCG18-235ENST00000426882 CCDC40Q4G0X9 1142 aa22.57■■□□□ 1.2
HCG18-235ENST00000426882 WWC2Q6AWC2 1192 aa22.57■■□□□ 1.2
HCG18-235ENST00000426882 ZSWIM4Q9H7M6 989 aa22.57■■□□□ 1.2
HCG18-235ENST00000426882 CUL5Q93034 780 aa22.57■■□□□ 1.2
HCG18-235ENST00000426882 PLEKHG3A1L390 1219 aa22.57■■□□□ 1.2
HCG18-235ENST00000426882 LUZP1Q86V48 1076 aa22.57■■□□□ 1.2
HCG18-235ENST00000426882 HELLSQ9NRZ9 838 aa22.57■■□□□ 1.2
HCG18-235ENST00000426882 PLXNC1O60486 1568 aa22.57■■□□□ 1.2
HCG18-235ENST00000426882 KDM5CP41229 1560 aa22.57■■□□□ 1.2
HCG18-235ENST00000426882 TRIM75PA6NK02 468 aa22.57■■□□□ 1.2
HCG18-235ENST00000426882 EYA2O00167 538 aa22.57■■□□□ 1.2
HCG18-235ENST00000426882 MCM3P25205 808 aa22.57■■□□□ 1.2
HCG18-235ENST00000426882 NLRP3Q96P20 1036 aa22.57■■□□□ 1.2
HCG18-235ENST00000426882 PTGS1P23219 599 aa22.56■■□□□ 1.2
HCG18-235ENST00000426882 RFC4P35249 363 aa22.56■■□□□ 1.2
HCG18-235ENST00000426882 RMND1Q9NWS8 449 aa22.56■■□□□ 1.2
HCG18-235ENST00000426882 KDM5AP29375 1690 aaKnown RBP22.56■■□□□ 1.2
HCG18-235ENST00000426882 SPDYE4A6NLX3 237 aa22.56■■□□□ 1.2
HCG18-235ENST00000426882 FAM114A1Q8IWE2 563 aa22.56■■□□□ 1.2
HCG18-235ENST00000426882 PLBD2Q8NHP8 589 aa22.56■■□□□ 1.2
HCG18-235ENST00000426882 A0A1B0GUL7 405 aa22.56■■□□□ 1.2
HCG18-235ENST00000426882 RXRAP19793 462 aa22.56■■□□□ 1.2
HCG18-235ENST00000426882 SUCLG2Q96I99 432 aa22.56■■□□□ 1.2
HCG18-235ENST00000426882 DNAI1Q9UI46 699 aa22.56■■□□□ 1.2
HCG18-235ENST00000426882 CFAP65Q6ZU64 1925 aaKnown RBP22.56■■□□□ 1.2
HCG18-235ENST00000426882 BRAPQ7Z569 592 aa22.56■■□□□ 1.2
HCG18-235ENST00000426882 CNKSR2Q8WXI2 1034 aa22.56■■□□□ 1.2
HCG18-235ENST00000426882 ORAI2Q96SN7 254 aa22.56■■□□□ 1.2
HCG18-235ENST00000426882 TSPY3P0CV98 308 aa22.55■■□□□ 1.2
HCG18-235ENST00000426882 TSPY8P0CW00 308 aa22.55■■□□□ 1.2
HCG18-235ENST00000426882 GSPT1P15170 499 aaKnown RBP22.55■■□□□ 1.2
HCG18-235ENST00000426882 MAGEB6Q8N7X4 407 aa22.55■■□□□ 1.2
HCG18-235ENST00000426882 MIGA1Q8NAN2 632 aa22.55■■□□□ 1.2
HCG18-235ENST00000426882 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.55■■□□□ 1.2
HCG18-235ENST00000426882 FAM173BQ6P4H8 233 aa22.55■■□□□ 1.2
HCG18-235ENST00000426882 KIF24Q5T7B8 1368 aa22.55■■□□□ 1.2
HCG18-235ENST00000426882 FAM89AQ96GI7 184 aa22.55■■□□□ 1.2
HCG18-235ENST00000426882 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.55■■□□□ 1.2
HCG18-235ENST00000426882 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.55■■□□□ 1.2
HCG18-235ENST00000426882 GNAT2P19087 354 aa22.54■■□□□ 1.2
HCG18-235ENST00000426882 GSTO1P78417 241 aa22.54■■□□□ 1.2
HCG18-235ENST00000426882 SETDB2Q96T68 719 aa22.54■■□□□ 1.2
HCG18-235ENST00000426882 MAGEB6P1A0A0J9YX57 407 aa22.54■■□□□ 1.2
HCG18-235ENST00000426882 MATR3P43243 847 aaKnown RBP eCLIP22.54■■□□□ 1.21e-6■■■□□ 14.6
HCG18-235ENST00000426882 DHX58Q96C10 678 aa22.54■■□□□ 1.2
HCG18-235ENST00000426882 ZNF219Q9P2Y4 722 aaPredicted RBP22.54■■□□□ 1.2
HCG18-235ENST00000426882 ZNF521Q96K83 1311 aa22.54■■□□□ 1.2
HCG18-235ENST00000426882 PCDH11XQ9BZA7 1347 aa22.54■■□□□ 1.2
HCG18-235ENST00000426882 PCDH11YQ9BZA8 1340 aa22.54■■□□□ 1.2
HCG18-235ENST00000426882 STAT6P42226 847 aa22.54■■□□□ 1.2
HCG18-235ENST00000426882 KAT6BQ8WYB5 2073 aa22.54■■□□□ 1.2
HCG18-235ENST00000426882 TCERG1LQ5VWI1 586 aa22.53■■□□□ 1.2
HCG18-235ENST00000426882 EIF4A1P60842 406 aaKnown RBP22.53■■□□□ 1.2
HCG18-235ENST00000426882 SPAG1Q07617 926 aa22.53■■□□□ 1.2
HCG18-235ENST00000426882 DDB1Q16531 1140 aa22.53■■□□□ 1.2
HCG18-235ENST00000426882 SSR1P43307 286 aaKnown RBP22.53■■□□□ 1.2
HCG18-235ENST00000426882 GNAQP50148 359 aa22.53■■□□□ 1.2
HCG18-235ENST00000426882 CTAGE1Q96RT6 745 aa22.53■■□□□ 1.2
HCG18-235ENST00000426882 EXOC1Q9NV70 894 aa22.53■■□□□ 1.2
HCG18-235ENST00000426882 ERVK-7P63135 1459 aa22.53■■□□□ 1.2
HCG18-235ENST00000426882 POTEB2H3BUK9 544 aa22.53■■□□□ 1.2
HCG18-235ENST00000426882 PLEKHF1Q96S99 279 aa22.53■■□□□ 1.2
HCG18-235ENST00000426882 ARHGEF10O15013 1369 aa22.52■■□□□ 1.2
HCG18-235ENST00000426882 TRIM21P19474 475 aaKnown RBP22.52■■□□□ 1.2
HCG18-235ENST00000426882 SEPT7Q16181 437 aaKnown RBP22.52■■□□□ 1.2
HCG18-235ENST00000426882 HLA-DOAP06340 250 aa22.52■■□□□ 1.2
HCG18-235ENST00000426882 HSPA4P34932 840 aa22.52■■□□□ 1.2
HCG18-235ENST00000426882 BMS1Q14692 1282 aaKnown RBP22.52■■□□□ 1.2
HCG18-235ENST00000426882 ALS2CR12Q96Q35 445 aa22.52■■□□□ 1.2
HCG18-235ENST00000426882 TARBP1Q13395 1621 aaKnown RBP22.52■■□□□ 1.19
HCG18-235ENST00000426882 HEATR3Q7Z4Q2 680 aa22.51■■□□□ 1.19
HCG18-235ENST00000426882 DTNBO60941 627 aa22.51■■□□□ 1.19
HCG18-235ENST00000426882 ATL3Q6DD88 541 aa22.51■■□□□ 1.19
HCG18-235ENST00000426882 USP44Q9H0E7 712 aa22.51■■□□□ 1.19
HCG18-235ENST00000426882 A0A1B0GVL5 298 aa22.51■■□□□ 1.19
HCG18-235ENST00000426882 ZNF445P59923 1031 aa22.51■■□□□ 1.19
HCG18-235ENST00000426882 CCDC178Q5BJE1 867 aa22.51■■□□□ 1.19
HCG18-235ENST00000426882 SMARCC1Q92922 1105 aaPredicted RBP22.51■■□□□ 1.19
HCG18-235ENST00000426882 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP22.51■■□□□ 1.192e-6■■■■□ 23.1
HCG18-235ENST00000426882 LMBRD1Q9NUN5 540 aa22.51■■□□□ 1.19
HCG18-235ENST00000426882 GCKRQ14397 625 aa22.5■■□□□ 1.19
HCG18-235ENST00000426882 IFNKQ9P0W0 207 aa22.5■■□□□ 1.19
HCG18-235ENST00000426882 AKR1B10O60218 316 aa22.5■■□□□ 1.19
HCG18-235ENST00000426882 SLC52A2Q9HAB3 445 aa22.5■■□□□ 1.19
HCG18-235ENST00000426882 FAM160A1Q05DH4 1040 aa22.49■■□□□ 1.19
HCG18-235ENST00000426882 FBXO3Q9UK99 471 aa22.49■■□□□ 1.19
HCG18-235ENST00000426882 CALM1P0DP23 149 aa22.49■■□□□ 1.19
HCG18-235ENST00000426882 CALM2P0DP24 149 aa22.49■■□□□ 1.19
HCG18-235ENST00000426882 CALM3P0DP25 149 aa22.49■■□□□ 1.19
HCG18-235ENST00000426882 JADE2Q9NQC1 790 aa22.49■■□□□ 1.19
HCG18-235ENST00000426882 RRAGDQ9NQL2 400 aaPredicted RBP22.49■■□□□ 1.19
HCG18-235ENST00000426882 ZNF594Q96JF6 807 aaPredicted RBP22.49■■□□□ 1.19
HCG18-235ENST00000426882 LRRC27Q9C0I9 530 aa22.49■■□□□ 1.19
HCG18-235ENST00000426882 NDUFB9Q9Y6M9 179 aa22.49■■□□□ 1.19
HCG18-235ENST00000426882 RTL9Q8NET4 1388 aa22.49■■□□□ 1.19
HCG18-235ENST00000426882 MBD4O95243 580 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms