RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 ANKRD44Q8N8A2 993 aa20.4■□□□□ 0.86
ARHGEF28-203ENST00000426542 CUL7Q14999 1698 aa20.4■□□□□ 0.86
ARHGEF28-203ENST00000426542 HMGXB3Q12766 1538 aa20.39■□□□□ 0.86
ARHGEF28-203ENST00000426542 AKAP4Q5JQC9 854 aa20.39■□□□□ 0.86
ARHGEF28-203ENST00000426542 VTI1AQ96AJ9 217 aa20.39■□□□□ 0.86
ARHGEF28-203ENST00000426542 CCDC186Q7Z3E2 898 aa20.39■□□□□ 0.85
ARHGEF28-203ENST00000426542 C8orf58Q8NAV2 365 aa20.39■□□□□ 0.85
ARHGEF28-203ENST00000426542 SREK1Q8WXA9 508 aaKnown RBP20.39■□□□□ 0.85
ARHGEF28-203ENST00000426542 PRIMPOLQ96LW4 560 aa20.39■□□□□ 0.85
ARHGEF28-203ENST00000426542 DENND4BO75064 1496 aaPredicted RBP20.39■□□□□ 0.85
ARHGEF28-203ENST00000426542 OGFOD1Q8N543 542 aa20.39■□□□□ 0.85
ARHGEF28-203ENST00000426542 IQCGQ9H095 443 aaKnown RBP20.39■□□□□ 0.85
ARHGEF28-203ENST00000426542 CHST3Q7LGC8 479 aa20.39■□□□□ 0.85
ARHGEF28-203ENST00000426542 LRRC45Q96CN5 670 aa20.39■□□□□ 0.85
ARHGEF28-203ENST00000426542 RRP36Q96EU6 259 aaKnown RBP20.39■□□□□ 0.85
ARHGEF28-203ENST00000426542 RTL9Q8NET4 1388 aa20.39■□□□□ 0.85
ARHGEF28-203ENST00000426542 KRT2P35908 639 aa20.39■□□□□ 0.85
ARHGEF28-203ENST00000426542 PLS1Q14651 629 aa20.39■□□□□ 0.85
ARHGEF28-203ENST00000426542 SYT1P21579 422 aa20.38■□□□□ 0.85
ARHGEF28-203ENST00000426542 TERF1P54274 439 aa20.38■□□□□ 0.85
ARHGEF28-203ENST00000426542 PPIP5K1Q6PFW1 1433 aa20.38■□□□□ 0.85
ARHGEF28-203ENST00000426542 TACC1O75410 805 aa20.38■□□□□ 0.85
ARHGEF28-203ENST00000426542 DPH6Q7L8W6 267 aa20.38■□□□□ 0.85
ARHGEF28-203ENST00000426542 GSTA5Q7RTV2 222 aa20.38■□□□□ 0.85
ARHGEF28-203ENST00000426542 FAM200AQ8TCP9 573 aa20.38■□□□□ 0.85
ARHGEF28-203ENST00000426542 PCDHB15Q9Y5E8 787 aa20.38■□□□□ 0.85
ARHGEF28-203ENST00000426542 FANCAO15360 1455 aa20.38■□□□□ 0.85
ARHGEF28-203ENST00000426542 TRIM75PA6NK02 468 aa20.38■□□□□ 0.85
ARHGEF28-203ENST00000426542 MRPS9P82933 396 aaKnown RBP20.38■□□□□ 0.85
ARHGEF28-203ENST00000426542 EEF2P13639 858 aaKnown RBP20.37■□□□□ 0.85
ARHGEF28-203ENST00000426542 FAM212AQ96EL1 285 aa20.37■□□□□ 0.85
ARHGEF28-203ENST00000426542 MSH6P52701 1360 aa20.37■□□□□ 0.85
ARHGEF28-203ENST00000426542 ARL1P40616 181 aaPredicted RBP20.37■□□□□ 0.85
ARHGEF28-203ENST00000426542 PRPHP41219 470 aa20.37■□□□□ 0.85
ARHGEF28-203ENST00000426542 PUS7Q96PZ0 661 aaKnown RBP20.37■□□□□ 0.85
ARHGEF28-203ENST00000426542 SPTLC2O15270 562 aa20.37■□□□□ 0.85
ARHGEF28-203ENST00000426542 MAGEB6Q8N7X4 407 aa20.37■□□□□ 0.85
ARHGEF28-203ENST00000426542 IMPG2Q9BZV3 1241 aa20.37■□□□□ 0.85
ARHGEF28-203ENST00000426542 DYNC1I1O14576 645 aa20.37■□□□□ 0.85
ARHGEF28-203ENST00000426542 OTUD6BQ8N6M0 293 aa20.37■□□□□ 0.85
ARHGEF28-203ENST00000426542 TCHPQ9BT92 498 aa20.37■□□□□ 0.85
ARHGEF28-203ENST00000426542 VEZTQ9HBM0 779 aa20.37■□□□□ 0.85
ARHGEF28-203ENST00000426542 SPDYE3A6NKU9 549 aa20.36■□□□□ 0.85
ARHGEF28-203ENST00000426542 FAM13AO94988 1023 aa20.36■□□□□ 0.85
ARHGEF28-203ENST00000426542 MIGA1Q8NAN2 632 aa20.36■□□□□ 0.85
ARHGEF28-203ENST00000426542 RPRD2Q5VT52 1461 aaKnown RBP20.36■□□□□ 0.85
ARHGEF28-203ENST00000426542 RNF113AO15541 343 aaKnown RBP20.36■□□□□ 0.85
ARHGEF28-203ENST00000426542 FBF1Q8TES7 1133 aa20.36■□□□□ 0.85
ARHGEF28-203ENST00000426542 DZIP3Q86Y13 1208 aaKnown RBP20.36■□□□□ 0.85
ARHGEF28-203ENST00000426542 MXRA7P84157 204 aa20.36■□□□□ 0.85
ARHGEF28-203ENST00000426542 APOBRQ0VD83 1088 aa20.36■□□□□ 0.85
ARHGEF28-203ENST00000426542 ABCA10Q8WWZ4 1543 aa20.36■□□□□ 0.85
ARHGEF28-203ENST00000426542 MCM7P33993 719 aa20.36■□□□□ 0.85
ARHGEF28-203ENST00000426542 NYXQ9GZU5 481 aa20.36■□□□□ 0.85
ARHGEF28-203ENST00000426542 DMRT2Q9Y5R5 561 aa20.36■□□□□ 0.85
ARHGEF28-203ENST00000426542 GNAT2P19087 354 aa20.35■□□□□ 0.85
ARHGEF28-203ENST00000426542 NOLC1Q14978 699 aaKnown RBP eCLIP20.35■□□□□ 0.85
ARHGEF28-203ENST00000426542 KRT79Q5XKE5 535 aa20.35■□□□□ 0.85
ARHGEF28-203ENST00000426542 CTAGE9A4FU28 777 aa20.35■□□□□ 0.85
ARHGEF28-203ENST00000426542 KIF4AO95239 1232 aa20.35■□□□□ 0.85
ARHGEF28-203ENST00000426542 TNNI2P48788 182 aa20.35■□□□□ 0.85
ARHGEF28-203ENST00000426542 NSRP1Q9H0G5 558 aaKnown RBP20.35■□□□□ 0.85
ARHGEF28-203ENST00000426542 CCDC50Q8IVM0 306 aa20.35■□□□□ 0.85
ARHGEF28-203ENST00000426542 SIRT1Q96EB6 747 aa20.35■□□□□ 0.85
ARHGEF28-203ENST00000426542 MCM9Q9NXL9 1143 aa20.35■□□□□ 0.85
ARHGEF28-203ENST00000426542 TNRQ92752 1358 aa20.35■□□□□ 0.85
ARHGEF28-203ENST00000426542 GRM1Q13255 1194 aa20.35■□□□□ 0.85
ARHGEF28-203ENST00000426542 ASXL1Q8IXJ9 1541 aa20.34■□□□□ 0.85
ARHGEF28-203ENST00000426542 LMBR1Q8WVP7 490 aa20.34■□□□□ 0.85
ARHGEF28-203ENST00000426542 ARFGAP3Q9NP61 516 aa20.34■□□□□ 0.85
ARHGEF28-203ENST00000426542 UBXN1Q04323 297 aa20.34■□□□□ 0.85
ARHGEF28-203ENST00000426542 CALML3P27482 149 aa20.34■□□□□ 0.85
ARHGEF28-203ENST00000426542 LMOD1P29536 600 aaPredicted RBP20.34■□□□□ 0.85
ARHGEF28-203ENST00000426542 AKNAD1Q5T1N1 836 aa20.34■□□□□ 0.85
ARHGEF28-203ENST00000426542 KRT83P78385 493 aa20.34■□□□□ 0.85
ARHGEF28-203ENST00000426542 MCM6Q14566 821 aa20.34■□□□□ 0.85
ARHGEF28-203ENST00000426542 ZBTB21Q9ULJ3 1066 aa20.34■□□□□ 0.85
ARHGEF28-203ENST00000426542 CLEC11AQ9Y240 323 aa20.34■□□□□ 0.85
ARHGEF28-203ENST00000426542 STX17P56962 302 aa20.33■□□□□ 0.85
ARHGEF28-203ENST00000426542 HELBQ8NG08 1087 aaPredicted RBP20.33■□□□□ 0.85
ARHGEF28-203ENST00000426542 EIF4A2Q14240 407 aaKnown RBP20.33■□□□□ 0.85
ARHGEF28-203ENST00000426542 CAPZA3Q96KX2 299 aa20.33■□□□□ 0.85
ARHGEF28-203ENST00000426542 CCDC77Q9BR77 488 aa20.33■□□□□ 0.85
ARHGEF28-203ENST00000426542 MAP3K9P80192 1104 aa20.33■□□□□ 0.84
ARHGEF28-203ENST00000426542 TFCP2Q12800 502 aa20.33■□□□□ 0.84
ARHGEF28-203ENST00000426542 LRRC59Q96AG4 307 aaKnown RBP20.33■□□□□ 0.84
ARHGEF28-203ENST00000426542 BICDL2A1A5D9 508 aa20.33■□□□□ 0.84
ARHGEF28-203ENST00000426542 NEK11Q8NG66 645 aa20.33■□□□□ 0.84
ARHGEF28-203ENST00000426542 CCDC63Q8NA47 563 aa20.32■□□□□ 0.84
ARHGEF28-203ENST00000426542 KIF5AQ12840 1032 aa20.32■□□□□ 0.84
ARHGEF28-203ENST00000426542 MTHFSDQ2M296 383 aaKnown RBP20.32■□□□□ 0.84
ARHGEF28-203ENST00000426542 TTC41PQ6P2S7 1318 aa20.32■□□□□ 0.84
ARHGEF28-203ENST00000426542 HSPA4P34932 840 aa20.32■□□□□ 0.84
ARHGEF28-203ENST00000426542 AK2P54819 239 aa20.32■□□□□ 0.84
ARHGEF28-203ENST00000426542 RBM26Q5T8P6 1007 aaKnown RBP20.32■□□□□ 0.84
ARHGEF28-203ENST00000426542 CREB3L3Q68CJ9 461 aa20.32■□□□□ 0.84
ARHGEF28-203ENST00000426542 IPO4Q8TEX9 1081 aaKnown RBP20.32■□□□□ 0.84
ARHGEF28-203ENST00000426542 PLIN2Q99541 437 aa20.32■□□□□ 0.84
ARHGEF28-203ENST00000426542 KRT222Q8N1A0 295 aa20.32■□□□□ 0.84
ARHGEF28-203ENST00000426542 RIMBP2O15034 1052 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms