RNA–Protein interactions for RNA: ENST00000425533.1

SMIM27-201, Transcript of small integral membrane protein 27, humanhuman

TSL 2

Gene SMIM27, Length 903 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM27-201ENST00000425533 OTUD7BQ6GQQ9 843 aa12.6□□□□□ -0.39
SMIM27-201ENST00000425533 USP17L1Q7RTZ2 530 aa12.6□□□□□ -0.39
SMIM27-201ENST00000425533 PTPN18Q99952 460 aa12.6□□□□□ -0.39
SMIM27-201ENST00000425533 VCANP13611 3396 aa12.6□□□□□ -0.39
SMIM27-201ENST00000425533 SASH1O94885 1247 aa12.59□□□□□ -0.39
SMIM27-201ENST00000425533 ANXA1P04083 346 aa12.59□□□□□ -0.39
SMIM27-201ENST00000425533 MAP3K11Q16584 847 aa12.59□□□□□ -0.39
SMIM27-201ENST00000425533 PROSER3Q2NL68 480 aa12.59□□□□□ -0.39
SMIM27-201ENST00000425533 PNISRQ8TF01 805 aaKnown RBP12.59□□□□□ -0.39
SMIM27-201ENST00000425533 ANKIB1Q9P2G1 1089 aa12.59□□□□□ -0.39
SMIM27-201ENST00000425533 STXBP5LQ9Y2K9 1186 aa12.59□□□□□ -0.39
SMIM27-201ENST00000425533 SSC5DA1L4H1 1573 aa12.59□□□□□ -0.39
SMIM27-201ENST00000425533 ZBTB7BO15156 539 aaPredicted RBP12.58□□□□□ -0.4
SMIM27-201ENST00000425533 GJA5P36382 358 aa12.58□□□□□ -0.4
SMIM27-201ENST00000425533 RPS8P62241 208 aaKnown RBP12.58□□□□□ -0.4
SMIM27-201ENST00000425533 ARHGEF6Q15052 776 aa12.58□□□□□ -0.4
SMIM27-201ENST00000425533 UBE2Q1Q7Z7E8 422 aa12.58□□□□□ -0.4
SMIM27-201ENST00000425533 APOBEC3FQ8IUX4 373 aaKnown RBP12.58□□□□□ -0.4
SMIM27-201ENST00000425533 DEFB123Q8N688 67 aa12.58□□□□□ -0.4
SMIM27-201ENST00000425533 HTATIP2Q9BUP3 242 aa12.58□□□□□ -0.4
SMIM27-201ENST00000425533 MXD3Q9BW11 206 aa12.58□□□□□ -0.4
SMIM27-201ENST00000425533 GGA1Q9UJY5 639 aa12.58□□□□□ -0.4
SMIM27-201ENST00000425533 NR2E3Q9Y5X4 410 aa12.58□□□□□ -0.4
SMIM27-201ENST00000425533 TESPA1A2RU30 521 aaPredicted RBP12.57□□□□□ -0.4
SMIM27-201ENST00000425533 PER1O15534 1290 aaPredicted RBP12.57□□□□□ -0.4
SMIM27-201ENST00000425533 Q7L0L9 218 aa12.57□□□□□ -0.4
SMIM27-201ENST00000425533 OGFOD1Q8N543 542 aa12.57□□□□□ -0.4
SMIM27-201ENST00000425533 COL1A1P02452 1464 aaPredicted RBP12.57□□□□□ -0.4
SMIM27-201ENST00000425533 SPTBN5Q9NRC6 3674 aaKnown RBP12.56□□□□□ -0.4
SMIM27-201ENST00000425533 EIF2S2P20042 333 aaKnown RBP12.56□□□□□ -0.4
SMIM27-201ENST00000425533 AIMP1Q12904 312 aaKnown RBP12.56□□□□□ -0.4
SMIM27-201ENST00000425533 MTFR1Q15390 333 aa12.56□□□□□ -0.4
SMIM27-201ENST00000425533 GPR153Q6NV75 609 aa12.56□□□□□ -0.4
SMIM27-201ENST00000425533 ANKRD13DQ6ZTN6 518 aa12.56□□□□□ -0.4
SMIM27-201ENST00000425533 COPS6Q7L5N1 327 aa12.56□□□□□ -0.4
SMIM27-201ENST00000425533 PODNQ7Z5L7 613 aa12.56□□□□□ -0.4
SMIM27-201ENST00000425533 FAM89AQ96GI7 184 aa12.56□□□□□ -0.4
SMIM27-201ENST00000425533 OTOFQ9HC10 1997 aa12.56□□□□□ -0.4
SMIM27-201ENST00000425533 U2AF1L5P0DN76 240 aaPredicted RBP12.55□□□□□ -0.4
SMIM27-201ENST00000425533 U2AF1Q01081 240 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMIM27-201ENST00000425533 CNGB1Q14028 1251 aaPredicted RBP12.55□□□□□ -0.4
SMIM27-201ENST00000425533 DACT2Q5SW24 774 aa12.55□□□□□ -0.4
SMIM27-201ENST00000425533 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.55□□□□□ -0.4
SMIM27-201ENST00000425533 XAGE3Q8WTP9 111 aa12.55□□□□□ -0.4
SMIM27-201ENST00000425533 ARHGAP39Q9C0H5 1083 aa12.55□□□□□ -0.4
SMIM27-201ENST00000425533 STAP2Q9UGK3 403 aa12.55□□□□□ -0.4
SMIM27-201ENST00000425533 ECM29Q5VYK3 1845 aa12.55□□□□□ -0.4
SMIM27-201ENST00000425533 UNCXA6NJT0 531 aa12.54□□□□□ -0.4
SMIM27-201ENST00000425533 PPP1R12BO60237 982 aaPredicted RBP12.54□□□□□ -0.4
SMIM27-201ENST00000425533 RTL5Q5HYW3 569 aaPredicted RBP12.54□□□□□ -0.4
SMIM27-201ENST00000425533 NKX2-3Q8TAU0 364 aa12.54□□□□□ -0.4
SMIM27-201ENST00000425533 DEFB129Q9H1M3 183 aa12.54□□□□□ -0.4
SMIM27-201ENST00000425533 GJA8P48165 433 aa12.53□□□□□ -0.4
SMIM27-201ENST00000425533 TAF1CQ15572 869 aaPredicted RBP12.53□□□□□ -0.4
SMIM27-201ENST00000425533 PCGF6Q9BYE7 350 aa12.53□□□□□ -0.4
SMIM27-201ENST00000425533 ZFYVE28Q9HCC9 887 aa12.53□□□□□ -0.4
SMIM27-201ENST00000425533 SEC31BQ9NQW1 1179 aa12.53□□□□□ -0.4
SMIM27-201ENST00000425533 PRDM6Q9NQX0 595 aa12.53□□□□□ -0.4
SMIM27-201ENST00000425533 MTMR10Q9NXD2 777 aa12.53□□□□□ -0.4
SMIM27-201ENST00000425533 NUDCQ9Y266 331 aa12.53□□□□□ -0.4
SMIM27-201ENST00000425533 MYO3BQ8WXR4 1341 aa12.53□□□□□ -0.4
SMIM27-201ENST00000425533 FBXW7Q969H0 707 aa12.52□□□□□ -0.41
SMIM27-201ENST00000425533 ZBED3Q96IU2 234 aaPredicted RBP12.52□□□□□ -0.41
SMIM27-201ENST00000425533 MS4A4AQ96JQ5 239 aa12.52□□□□□ -0.41
SMIM27-201ENST00000425533 CFAP53Q96M91 514 aa12.52□□□□□ -0.41
SMIM27-201ENST00000425533 XDHP47989 1333 aa12.52□□□□□ -0.41
SMIM27-201ENST00000425533 EVI5O60447 810 aa12.51□□□□□ -0.41
SMIM27-201ENST00000425533 LACTBP83111 547 aaPredicted RBP12.51□□□□□ -0.41
SMIM27-201ENST00000425533 ANKRD13AQ8IZ07 590 aa12.51□□□□□ -0.41
SMIM27-201ENST00000425533 BRI3BPQ8WY22 251 aa12.51□□□□□ -0.41
SMIM27-201ENST00000425533 OPTNQ96CV9 577 aa12.51□□□□□ -0.41
SMIM27-201ENST00000425533 TIMELESSQ9UNS1 1208 aa12.51□□□□□ -0.41
SMIM27-201ENST00000425533 EYSQ5T1H1 3165 aa12.51□□□□□ -0.41
SMIM27-201ENST00000425533 ALPK3Q96L96 1907 aa12.5□□□□□ -0.41
SMIM27-201ENST00000425533 IRS4O14654 1257 aaPredicted RBP12.5□□□□□ -0.41
SMIM27-201ENST00000425533 USP2O75604 605 aaPredicted RBP12.5□□□□□ -0.41
SMIM27-201ENST00000425533 GNRH1P01148 92 aa12.5□□□□□ -0.41
SMIM27-201ENST00000425533 GJB1P08034 283 aa12.5□□□□□ -0.41
SMIM27-201ENST00000425533 CCL5P13501 91 aa12.5□□□□□ -0.41
SMIM27-201ENST00000425533 ATP2B4P23634 1241 aa12.5□□□□□ -0.41
SMIM27-201ENST00000425533 IREB2P48200 963 aaKnown RBP12.5□□□□□ -0.41
SMIM27-201ENST00000425533 MMP14P50281 582 aa12.5□□□□□ -0.41
SMIM27-201ENST00000425533 PRMT2P55345 433 aa12.5□□□□□ -0.41
SMIM27-201ENST00000425533 KIF22Q14807 665 aa12.5□□□□□ -0.41
SMIM27-201ENST00000425533 STRIP1Q5VSL9 837 aa12.5□□□□□ -0.41
SMIM27-201ENST00000425533 KIAA0825Q8IV33 1275 aa12.5□□□□□ -0.41
SMIM27-201ENST00000425533 FAM43AQ8N2R8 423 aa12.5□□□□□ -0.41
SMIM27-201ENST00000425533 ISCA1Q9BUE6 129 aa12.5□□□□□ -0.41
SMIM27-201ENST00000425533 ELP3Q9H9T3 547 aa12.5□□□□□ -0.41
SMIM27-201ENST00000425533 PPP2R3BQ9Y5P8 575 aa12.5□□□□□ -0.41
SMIM27-201ENST00000425533 MED23Q9ULK4 1368 aa12.5□□□□□ -0.41
SMIM27-201ENST00000425533 CCL15-CCL14A0A0B4J2E2 113 aa12.49□□□□□ -0.41
SMIM27-201ENST00000425533 ATP5J2-PTCD1G3V325 749 aa12.49□□□□□ -0.41
SMIM27-201ENST00000425533 FARP2O94887 1054 aaPredicted RBP12.49□□□□□ -0.41
SMIM27-201ENST00000425533 CCL15Q16663 113 aa12.49□□□□□ -0.41
SMIM27-201ENST00000425533 SUPT20HL1Q3ZLR7 823 aa12.49□□□□□ -0.41
SMIM27-201ENST00000425533 NBPF12Q5TAG4 269 aaPredicted RBP12.49□□□□□ -0.41
SMIM27-201ENST00000425533 SPEF2Q9C093 1822 aa12.48□□□□□ -0.41
SMIM27-201ENST00000425533 TLR2O60603 784 aa12.48□□□□□ -0.41
SMIM27-201ENST00000425533 ECM2O94769 699 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms