RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 EIF4EBP3O60516 100 aaPredicted RBP6.85□□□□□ -1.31
HDAC9-209ENST00000425071 RAC1P63000 192 aa6.85□□□□□ -1.31
HDAC9-209ENST00000425071 ATP2B2Q01814 1243 aa6.85□□□□□ -1.31
HDAC9-209ENST00000425071 TRIM28Q13263 835 aaKnown RBP6.85□□□□□ -1.31
HDAC9-209ENST00000425071 ENOX2Q16206 610 aaKnown RBP6.85□□□□□ -1.31
HDAC9-209ENST00000425071 TRAPPC3LQ5T215 181 aa6.85□□□□□ -1.31
HDAC9-209ENST00000425071 TMCO4Q5TGY1 634 aa6.85□□□□□ -1.31
HDAC9-209ENST00000425071 ALG1LQ6GMV1 187 aa6.85□□□□□ -1.31
HDAC9-209ENST00000425071 C8orf86Q6ZUL3 223 aa6.85□□□□□ -1.31
HDAC9-209ENST00000425071 CCDC74AQ96AQ1 378 aa6.85□□□□□ -1.31
HDAC9-209ENST00000425071 ADAM19Q9H013 955 aa6.85□□□□□ -1.31
HDAC9-209ENST00000425071 NFKBIEO00221 500 aa6.84□□□□□ -1.31
HDAC9-209ENST00000425071 SPATA31C1P0DKV0 1188 aa6.84□□□□□ -1.31
HDAC9-209ENST00000425071 ATP11AP98196 1134 aa6.84□□□□□ -1.31
HDAC9-209ENST00000425071 PEAR1Q5VY43 1037 aaPredicted RBP6.84□□□□□ -1.31
HDAC9-209ENST00000425071 GDF6Q6KF10 455 aaPredicted RBP6.84□□□□□ -1.31
HDAC9-209ENST00000425071 DNAJC14Q6Y2X3 702 aaPredicted RBP6.84□□□□□ -1.31
HDAC9-209ENST00000425071 NXPE3Q969Y0 559 aa6.84□□□□□ -1.31
HDAC9-209ENST00000425071 POP1Q99575 1024 aaKnown RBP6.84□□□□□ -1.31
HDAC9-209ENST00000425071 ZKSCAN3Q9BRR0 538 aa6.84□□□□□ -1.31
HDAC9-209ENST00000425071 BHLHE41Q9C0J9 482 aaPredicted RBP6.84□□□□□ -1.31
HDAC9-209ENST00000425071 PPP4R2Q9NY27 417 aa6.84□□□□□ -1.31
HDAC9-209ENST00000425071 ANKRD33BA6NCL7 494 aa6.83□□□□□ -1.32
HDAC9-209ENST00000425071 CDC27P30260 824 aa6.83□□□□□ -1.32
HDAC9-209ENST00000425071 IRS1P35568 1242 aa6.83□□□□□ -1.32
HDAC9-209ENST00000425071 CABP4P57796 275 aa6.83□□□□□ -1.32
HDAC9-209ENST00000425071 IL22RA1Q8N6P7 574 aa6.83□□□□□ -1.32
HDAC9-209ENST00000425071 FRMD6Q96NE9 622 aa6.83□□□□□ -1.32
HDAC9-209ENST00000425071 ZFYVE1Q9HBF4 777 aa6.83□□□□□ -1.32
HDAC9-209ENST00000425071 NLRP2Q9NX02 1062 aa6.83□□□□□ -1.32
HDAC9-209ENST00000425071 TRIM33Q9UPN9 1127 aa6.83□□□□□ -1.32
HDAC9-209ENST00000425071 TRAK1Q9UPV9 953 aa6.83□□□□□ -1.32
HDAC9-209ENST00000425071 PPME1Q9Y570 386 aa6.83□□□□□ -1.32
HDAC9-209ENST00000425071 A0A0A0MRY4 1105 aa6.82□□□□□ -1.32
HDAC9-209ENST00000425071 PNMA6FA0A0J9YX94 578 aa6.82□□□□□ -1.32
HDAC9-209ENST00000425071 A0A1W2PP55 124 aa6.82□□□□□ -1.32
HDAC9-209ENST00000425071 GIPC1O14908 333 aa6.82□□□□□ -1.32
HDAC9-209ENST00000425071 MAPK8P45983 427 aa6.82□□□□□ -1.32
HDAC9-209ENST00000425071 BAG6P46379 1132 aa6.82□□□□□ -1.32
HDAC9-209ENST00000425071 USPL1Q5W0Q7 1092 aa6.82□□□□□ -1.32
HDAC9-209ENST00000425071 FAM117BQ6P1L5 589 aa6.82□□□□□ -1.32
HDAC9-209ENST00000425071 DMRTC2Q8IXT2 367 aaPredicted RBP6.82□□□□□ -1.32
HDAC9-209ENST00000425071 BSNDQ8WZ55 320 aa6.82□□□□□ -1.32
HDAC9-209ENST00000425071 WNT8BQ93098 351 aa6.82□□□□□ -1.32
HDAC9-209ENST00000425071 NACC1Q96RE7 527 aa6.82□□□□□ -1.32
HDAC9-209ENST00000425071 POLR3DP05423 398 aaPredicted RBP6.81□□□□□ -1.32
HDAC9-209ENST00000425071 ELNP15502 786 aa6.81□□□□□ -1.32
HDAC9-209ENST00000425071 RASSF7Q02833 373 aa6.81□□□□□ -1.32
HDAC9-209ENST00000425071 PTPN12Q05209 780 aaKnown RBP6.81□□□□□ -1.32
HDAC9-209ENST00000425071 CCNJLQ8IV13 435 aa6.81□□□□□ -1.32
HDAC9-209ENST00000425071 SRCIN1Q9C0H9 1055 aa6.81□□□□□ -1.32
HDAC9-209ENST00000425071 EHD4Q9H223 541 aa6.81□□□□□ -1.32
HDAC9-209ENST00000425071 SUV39H2Q9H5I1 410 aa6.81□□□□□ -1.32
HDAC9-209ENST00000425071 LIN7BQ9HAP6 207 aa6.81□□□□□ -1.32
HDAC9-209ENST00000425071 NPHS2Q9NP85 383 aa6.81□□□□□ -1.32
HDAC9-209ENST00000425071 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.81□□□□□ -1.32
HDAC9-209ENST00000425071 COL8A1P27658 744 aa6.8□□□□□ -1.32
HDAC9-209ENST00000425071 TRIM26Q12899 539 aaPredicted RBP6.8□□□□□ -1.32
HDAC9-209ENST00000425071 EAPPQ56P03 285 aaPredicted RBP6.8□□□□□ -1.32
HDAC9-209ENST00000425071 PRPF40BQ6NWY9 871 aaKnown RBP6.8□□□□□ -1.32
HDAC9-209ENST00000425071 FBXO11Q86XK2 927 aa6.8□□□□□ -1.32
HDAC9-209ENST00000425071 FMR1NBQ8N0W7 255 aaPredicted RBP6.8□□□□□ -1.32
HDAC9-209ENST00000425071 TMEM151AQ8N4L1 468 aa6.8□□□□□ -1.32
HDAC9-209ENST00000425071 LACRTQ9GZZ8 138 aa6.8□□□□□ -1.32
HDAC9-209ENST00000425071 LATS2Q9NRM7 1088 aa6.8□□□□□ -1.32
HDAC9-209ENST00000425071 SOX13Q9UN79 622 aa6.8□□□□□ -1.32
HDAC9-209ENST00000425071 H3BRJ5 948 aa6.79□□□□□ -1.32
HDAC9-209ENST00000425071 GADD45BO75293 160 aaPredicted RBP6.79□□□□□ -1.32
HDAC9-209ENST00000425071 PRPF40AO75400 957 aaKnown RBP6.79□□□□□ -1.32
HDAC9-209ENST00000425071 GDF11O95390 407 aa6.79□□□□□ -1.32
HDAC9-209ENST00000425071 LDHBP07195 334 aaKnown RBP6.79□□□□□ -1.32
HDAC9-209ENST00000425071 P4HBP07237 508 aaKnown RBP6.79□□□□□ -1.32
HDAC9-209ENST00000425071 XRCC5P13010 732 aaKnown RBP6.79□□□□□ -1.32
HDAC9-209ENST00000425071 ACPPP15309 386 aa6.79□□□□□ -1.32
HDAC9-209ENST00000425071 ITGAEP38570 1179 aa6.79□□□□□ -1.32
HDAC9-209ENST00000425071 NPAS4Q8IUM7 802 aa6.79□□□□□ -1.32
HDAC9-209ENST00000425071 KLHL23Q8NBE8 558 aa6.79□□□□□ -1.32
HDAC9-209ENST00000425071 DCAF5Q96JK2 942 aa6.79□□□□□ -1.32
HDAC9-209ENST00000425071 TCF12Q99081 682 aa6.79□□□□□ -1.32
HDAC9-209ENST00000425071 OSGEPQ9NPF4 335 aa6.79□□□□□ -1.32
HDAC9-209ENST00000425071 APBA3O96018 575 aa6.78□□□□□ -1.32
HDAC9-209ENST00000425071 ARL4DP49703 201 aa6.78□□□□□ -1.32
HDAC9-209ENST00000425071 GSK3AP49840 483 aa6.78□□□□□ -1.32
HDAC9-209ENST00000425071 PIP4K2BP78356 416 aa6.78□□□□□ -1.32
HDAC9-209ENST00000425071 NRG1Q02297 640 aaPredicted RBP6.78□□□□□ -1.32
HDAC9-209ENST00000425071 EPS8L3Q8TE67 593 aaKnown RBP6.78□□□□□ -1.32
HDAC9-209ENST00000425071 SOX17Q9H6I2 414 aaPredicted RBP6.78□□□□□ -1.32
HDAC9-209ENST00000425071 SPG7Q9UQ90 795 aa6.78□□□□□ -1.32
HDAC9-209ENST00000425071 A0A096LPE4 126 aa6.77□□□□□ -1.33
HDAC9-209ENST00000425071 A0A1W2PPZ6 126 aa6.77□□□□□ -1.33
HDAC9-209ENST00000425071 C9orf172C9J069 976 aa6.77□□□□□ -1.33
HDAC9-209ENST00000425071 TRPA1O75762 1119 aa6.77□□□□□ -1.33
HDAC9-209ENST00000425071 ITPKAP23677 461 aa6.77□□□□□ -1.33
HDAC9-209ENST00000425071 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.77□□□□□ -1.33
HDAC9-209ENST00000425071 RPS26P11Q5JNZ5 115 aaPredicted RBP6.77□□□□□ -1.33
HDAC9-209ENST00000425071 IGF2-ASQ6U949 168 aa6.77□□□□□ -1.33
HDAC9-209ENST00000425071 ASAP3Q8TDY4 903 aa6.77□□□□□ -1.33
HDAC9-209ENST00000425071 BCL11AQ9H165 835 aa6.77□□□□□ -1.33
HDAC9-209ENST00000425071 TMEM238LA0A1B0GVL6 79 aa6.76□□□□□ -1.33
HDAC9-209ENST00000425071 LINC01387J3KSC0 135 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms