RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 DNAJC2Q99543 621 aaKnown RBP16.47■□□□□ 0.23
PRPF39-202ENST00000424478 FBXO3Q9UK99 471 aa16.47■□□□□ 0.23
PRPF39-202ENST00000424478 CD2APQ9Y5K6 639 aa16.47■□□□□ 0.23
PRPF39-202ENST00000424478 TGFB2P61812 414 aa16.46■□□□□ 0.23
PRPF39-202ENST00000424478 SP8Q8IXZ3 490 aa16.46■□□□□ 0.23
PRPF39-202ENST00000424478 TBC1D16Q8TBP0 767 aa16.46■□□□□ 0.23
PRPF39-202ENST00000424478 C7orf43Q8WVR3 580 aa16.46■□□□□ 0.23
PRPF39-202ENST00000424478 LPIN2Q92539 896 aa16.46■□□□□ 0.23
PRPF39-202ENST00000424478 DLEC1Q9Y238 1755 aa16.46■□□□□ 0.23
PRPF39-202ENST00000424478 XDHP47989 1333 aa16.46■□□□□ 0.23
PRPF39-202ENST00000424478 DPP8Q6V1X1 898 aaPredicted RBP16.46■□□□□ 0.23
PRPF39-202ENST00000424478 MPNDQ8N594 471 aa16.46■□□□□ 0.23
PRPF39-202ENST00000424478 AKAP2Q9Y2D5 859 aa16.46■□□□□ 0.23
PRPF39-202ENST00000424478 CCDC102BQ68D86 513 aa16.46■□□□□ 0.22
PRPF39-202ENST00000424478 SLC5A1P13866 664 aa16.45■□□□□ 0.22
PRPF39-202ENST00000424478 DOK7Q18PE1 504 aa16.45■□□□□ 0.22
PRPF39-202ENST00000424478 ECHDC1Q9NTX5 307 aa16.45■□□□□ 0.22
PRPF39-202ENST00000424478 GGA1Q9UJY5 639 aa16.45■□□□□ 0.22
PRPF39-202ENST00000424478 DUOX1Q9NRD9 1551 aa16.45■□□□□ 0.22
PRPF39-202ENST00000424478 TRIM6-TRIM34B2RNG4 842 aa16.45■□□□□ 0.22
PRPF39-202ENST00000424478 SLFNL1Q499Z3 407 aa16.45■□□□□ 0.22
PRPF39-202ENST00000424478 DALRD3Q5D0E6 543 aaKnown RBP16.45■□□□□ 0.22
PRPF39-202ENST00000424478 RILPL2Q969X0 211 aa16.45■□□□□ 0.22
PRPF39-202ENST00000424478 IFIT1P09914 478 aaKnown RBP16.44■□□□□ 0.22
PRPF39-202ENST00000424478 TTC39AQ5SRH9 613 aa16.44■□□□□ 0.22
PRPF39-202ENST00000424478 ANKRD2Q9GZV1 360 aa16.44■□□□□ 0.22
PRPF39-202ENST00000424478 ANTXR1Q9H6X2 564 aa16.44■□□□□ 0.22
PRPF39-202ENST00000424478 BRCA1P38398 1863 aaKnown RBP16.44■□□□□ 0.22
PRPF39-202ENST00000424478 FKBP4Q02790 459 aaKnown RBP eCLIP16.44■□□□□ 0.22
PRPF39-202ENST00000424478 FAM84BQ96KN1 310 aaPredicted RBP16.44■□□□□ 0.22
PRPF39-202ENST00000424478 LRRC37AA6NMS7 1700 aa16.44■□□□□ 0.22
PRPF39-202ENST00000424478 TBC1D9Q6ZT07 1266 aa16.44■□□□□ 0.22
PRPF39-202ENST00000424478 MCAMP43121 646 aa16.43■□□□□ 0.22
PRPF39-202ENST00000424478 TTC22Q5TAA0 569 aa16.43■□□□□ 0.22
PRPF39-202ENST00000424478 GPR108Q9NPR9 543 aa16.43■□□□□ 0.22
PRPF39-202ENST00000424478 ZNF277Q9NRM2 450 aaPredicted RBP16.43■□□□□ 0.22
PRPF39-202ENST00000424478 VPS37DQ86XT2 251 aa16.43■□□□□ 0.22
PRPF39-202ENST00000424478 KCNQ5Q9NR82 932 aa16.43■□□□□ 0.22
PRPF39-202ENST00000424478 DBNDD1Q9H9R9 158 aa16.42■□□□□ 0.22
PRPF39-202ENST00000424478 SDSP20132 328 aa16.42■□□□□ 0.22
PRPF39-202ENST00000424478 RASSF7Q02833 373 aa16.42■□□□□ 0.22
PRPF39-202ENST00000424478 RASGRF1Q13972 1273 aa16.42■□□□□ 0.22
PRPF39-202ENST00000424478 UBE4AQ14139 1066 aa16.42■□□□□ 0.22
PRPF39-202ENST00000424478 AOC3Q16853 763 aa16.42■□□□□ 0.22
PRPF39-202ENST00000424478 TMX4Q9H1E5 349 aaPredicted RBP16.42■□□□□ 0.22
PRPF39-202ENST00000424478 LTBP1Q14766 1721 aa16.42■□□□□ 0.22
PRPF39-202ENST00000424478 ZAP70P43403 619 aa16.42■□□□□ 0.22
PRPF39-202ENST00000424478 CHAF1AQ13111 956 aaPredicted RBP16.42■□□□□ 0.22
PRPF39-202ENST00000424478 WASHC4Q2M389 1173 aa16.42■□□□□ 0.22
PRPF39-202ENST00000424478 STAP2Q9UGK3 403 aa16.42■□□□□ 0.22
PRPF39-202ENST00000424478 GOLIM4O00461 696 aa16.41■□□□□ 0.22
PRPF39-202ENST00000424478 CCDC158Q5M9N0 1113 aa16.41■□□□□ 0.22
PRPF39-202ENST00000424478 MYO5AQ9Y4I1 1855 aaKnown RBP16.41■□□□□ 0.22
PRPF39-202ENST00000424478 FRAT2O75474 233 aaPredicted RBP16.41■□□□□ 0.22
PRPF39-202ENST00000424478 IRS2Q9Y4H2 1338 aa16.41■□□□□ 0.22
PRPF39-202ENST00000424478 COL1A1P02452 1464 aaPredicted RBP16.41■□□□□ 0.22
PRPF39-202ENST00000424478 FBXW7Q969H0 707 aa16.4■□□□□ 0.22
PRPF39-202ENST00000424478 MXD3Q9BW11 206 aa16.4■□□□□ 0.22
PRPF39-202ENST00000424478 CHD4Q14839 1912 aa16.4■□□□□ 0.22
PRPF39-202ENST00000424478 YBX3P16989 372 aaKnown RBP eCLIP16.4■□□□□ 0.22
PRPF39-202ENST00000424478 ATP2B4P23634 1241 aa16.4■□□□□ 0.22
PRPF39-202ENST00000424478 HIBADHP31937 336 aaKnown RBP16.4■□□□□ 0.22
PRPF39-202ENST00000424478 GPATCH3Q96I76 525 aa16.4■□□□□ 0.22
PRPF39-202ENST00000424478 PODXL2Q9NZ53 605 aa16.4■□□□□ 0.22
PRPF39-202ENST00000424478 HMG20BQ9P0W2 317 aa16.4■□□□□ 0.22
PRPF39-202ENST00000424478 LEMD3Q9Y2U8 911 aa16.4■□□□□ 0.22
PRPF39-202ENST00000424478 CAVIN4Q5BKX8 364 aa16.39■□□□□ 0.21
PRPF39-202ENST00000424478 CCDC93Q567U6 631 aa16.39■□□□□ 0.21
PRPF39-202ENST00000424478 OSBPL3Q9H4L5 887 aa16.39■□□□□ 0.21
PRPF39-202ENST00000424478 ARAP2Q8WZ64 1704 aa16.39■□□□□ 0.21
PRPF39-202ENST00000424478 AKAP11Q9UKA4 1901 aa16.39■□□□□ 0.21
PRPF39-202ENST00000424478 GLRX3O76003 335 aaKnown RBP16.38■□□□□ 0.21
PRPF39-202ENST00000424478 ATP5JP18859 108 aa16.38■□□□□ 0.21
PRPF39-202ENST00000424478 PRELPP51888 382 aa16.38■□□□□ 0.21
PRPF39-202ENST00000424478 TTC41PQ6P2S7 1318 aa16.38■□□□□ 0.21
PRPF39-202ENST00000424478 SNED1Q8TER0 1413 aa16.38■□□□□ 0.21
PRPF39-202ENST00000424478 ZC3H12CQ9C0D7 883 aaKnown RBP16.38■□□□□ 0.21
PRPF39-202ENST00000424478 NFKBIEO00221 500 aa16.38■□□□□ 0.21
PRPF39-202ENST00000424478 COL4A5P29400 1685 aa16.38■□□□□ 0.21
PRPF39-202ENST00000424478 TMC4Q7Z404 712 aa16.38■□□□□ 0.21
PRPF39-202ENST00000424478 FBXO33Q7Z6M2 555 aa16.38■□□□□ 0.21
PRPF39-202ENST00000424478 PPIP5K2O43314 1243 aa16.37■□□□□ 0.21
PRPF39-202ENST00000424478 CYP2E1P05181 493 aaPredicted RBP16.37■□□□□ 0.21
PRPF39-202ENST00000424478 ERC2O15083 957 aa16.37■□□□□ 0.21
PRPF39-202ENST00000424478 GRIK5Q16478 980 aa16.37■□□□□ 0.21
PRPF39-202ENST00000424478 PIH1D3Q9NQM4 214 aaKnown RBP16.37■□□□□ 0.21
PRPF39-202ENST00000424478 ABCF2Q9UG63 623 aa16.37■□□□□ 0.21
PRPF39-202ENST00000424478 ARHGAP27Q6ZUM4 889 aa16.36■□□□□ 0.21
PRPF39-202ENST00000424478 SPATA5Q8NB90 893 aa16.36■□□□□ 0.21
PRPF39-202ENST00000424478 CD209Q9NNX6 404 aa16.36■□□□□ 0.21
PRPF39-202ENST00000424478 HAUS7Q99871 368 aa16.36■□□□□ 0.21
PRPF39-202ENST00000424478 IL25Q9H293 177 aa16.36■□□□□ 0.21
PRPF39-202ENST00000424478 PAG1Q9NWQ8 432 aa16.36■□□□□ 0.21
PRPF39-202ENST00000424478 G3V3G9 751 aa16.36■□□□□ 0.21
PRPF39-202ENST00000424478 BMP2KLQ5H9B9 411 aa16.36■□□□□ 0.21
PRPF39-202ENST00000424478 DCAF8Q5TAQ9 597 aa16.36■□□□□ 0.21
PRPF39-202ENST00000424478 AK9Q5TCS8 1911 aa16.35■□□□□ 0.21
PRPF39-202ENST00000424478 SEC24BO95487 1268 aa16.35■□□□□ 0.21
PRPF39-202ENST00000424478 ARID4AP29374 1257 aaPredicted RBP16.35■□□□□ 0.21
PRPF39-202ENST00000424478 FSD1Q9BTV5 496 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms