RNA–Protein interactions for RNA: ENST00000423424.5

FNDC3B-205, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 3 BASIC

Gene FNDC3B, Length 408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-205ENST00000423424 MAP3K11Q16584 847 aa10.69□□□□□ -0.7
FNDC3B-205ENST00000423424 AMER1Q5JTC6 1135 aaPredicted RBP10.69□□□□□ -0.7
FNDC3B-205ENST00000423424 NLRP10Q86W26 655 aa10.69□□□□□ -0.7
FNDC3B-205ENST00000423424 NKX2-3Q8TAU0 364 aa10.69□□□□□ -0.7
FNDC3B-205ENST00000423424 COL4A1P02462 1669 aa10.69□□□□□ -0.7
FNDC3B-205ENST00000423424 SASH1O94885 1247 aa10.68□□□□□ -0.7
FNDC3B-205ENST00000423424 PRKAR2BP31323 418 aa10.68□□□□□ -0.7
FNDC3B-205ENST00000423424 GJA5P36382 358 aa10.68□□□□□ -0.7
FNDC3B-205ENST00000423424 GJA8P48165 433 aa10.68□□□□□ -0.7
FNDC3B-205ENST00000423424 TAF7Q15545 349 aaPredicted RBP10.68□□□□□ -0.7
FNDC3B-205ENST00000423424 APOBEC3FQ8IUX4 373 aaKnown RBP10.68□□□□□ -0.7
FNDC3B-205ENST00000423424 TRMT112Q9UI30 125 aaKnown RBP10.68□□□□□ -0.7
FNDC3B-205ENST00000423424 ZNF646O15015 1829 aaPredicted RBP10.68□□□□□ -0.7
FNDC3B-205ENST00000423424 USP17L3A6NCW0 530 aa10.67□□□□□ -0.7
FNDC3B-205ENST00000423424 USP17L4A6NCW7 530 aa10.67□□□□□ -0.7
FNDC3B-205ENST00000423424 EVI5O60447 810 aa10.67□□□□□ -0.7
FNDC3B-205ENST00000423424 UFL1O94874 794 aa10.67□□□□□ -0.7
FNDC3B-205ENST00000423424 USP17L1Q7RTZ2 530 aa10.67□□□□□ -0.7
FNDC3B-205ENST00000423424 ARHGAP39Q9C0H5 1083 aa10.67□□□□□ -0.7
FNDC3B-205ENST00000423424 PODXL2Q9NZ53 605 aa10.67□□□□□ -0.7
FNDC3B-205ENST00000423424 SSC5DA1L4H1 1573 aa10.66□□□□□ -0.7
FNDC3B-205ENST00000423424 PSME4Q14997 1843 aa10.66□□□□□ -0.7
FNDC3B-205ENST00000423424 UNCXA6NJT0 531 aa10.66□□□□□ -0.7
FNDC3B-205ENST00000423424 FARP2O94887 1054 aaPredicted RBP10.66□□□□□ -0.7
FNDC3B-205ENST00000423424 GJB1P08034 283 aa10.66□□□□□ -0.7
FNDC3B-205ENST00000423424 BMP8BP34820 402 aa10.66□□□□□ -0.7
FNDC3B-205ENST00000423424 LRIT3Q3SXY7 679 aa10.66□□□□□ -0.7
FNDC3B-205ENST00000423424 LRP10Q7Z4F1 713 aa10.66□□□□□ -0.7
FNDC3B-205ENST00000423424 OGFOD1Q8N543 542 aa10.66□□□□□ -0.7
FNDC3B-205ENST00000423424 GDF15Q99988 308 aa10.66□□□□□ -0.7
FNDC3B-205ENST00000423424 THUMPD2Q9BTF0 503 aaKnown RBP10.66□□□□□ -0.7
FNDC3B-205ENST00000423424 RSPH6AQ9H0K4 717 aa10.66□□□□□ -0.7
FNDC3B-205ENST00000423424 ZFYVE28Q9HCC9 887 aa10.66□□□□□ -0.7
FNDC3B-205ENST00000423424 GGA1Q9UJY5 639 aa10.66□□□□□ -0.7
FNDC3B-205ENST00000423424 RPTORQ8N122 1335 aa10.65□□□□□ -0.7
FNDC3B-205ENST00000423424 PPP1R12BO60237 982 aaPredicted RBP10.65□□□□□ -0.7
FNDC3B-205ENST00000423424 BCAMP50895 628 aa10.65□□□□□ -0.7
FNDC3B-205ENST00000423424 EIF4A1P60842 406 aaKnown RBP10.65□□□□□ -0.7
FNDC3B-205ENST00000423424 SF3B3Q15393 1217 aaKnown RBP10.65□□□□□ -0.7
FNDC3B-205ENST00000423424 TAF1CQ15572 869 aaPredicted RBP10.65□□□□□ -0.7
FNDC3B-205ENST00000423424 HSP90AB3PQ58FF7 597 aa10.65□□□□□ -0.7
FNDC3B-205ENST00000423424 PODNQ7Z5L7 613 aa10.65□□□□□ -0.7
FNDC3B-205ENST00000423424 MXD3Q9BW11 206 aa10.65□□□□□ -0.7
FNDC3B-205ENST00000423424 ANKIB1Q9P2G1 1089 aa10.65□□□□□ -0.7
FNDC3B-205ENST00000423424 RAPGEFL1Q9UHV5 662 aa10.65□□□□□ -0.7
FNDC3B-205ENST00000423424 COL1A1P02452 1464 aaPredicted RBP10.65□□□□□ -0.7
FNDC3B-205ENST00000423424 ZSWIM8A7E2V4 1837 aa10.64□□□□□ -0.71
FNDC3B-205ENST00000423424 GNRH1P01148 92 aa10.64□□□□□ -0.71
FNDC3B-205ENST00000423424 CCL5P13501 91 aa10.64□□□□□ -0.71
FNDC3B-205ENST00000423424 PLA2G5P39877 138 aa10.64□□□□□ -0.71
FNDC3B-205ENST00000423424 PRMT2P55345 433 aa10.64□□□□□ -0.71
FNDC3B-205ENST00000423424 RPS8P62241 208 aaKnown RBP10.64□□□□□ -0.71
FNDC3B-205ENST00000423424 LACTBP83111 547 aaPredicted RBP10.64□□□□□ -0.71
FNDC3B-205ENST00000423424 KIF22Q14807 665 aa10.64□□□□□ -0.71
FNDC3B-205ENST00000423424 ZNF428Q96B54 188 aa10.64□□□□□ -0.71
FNDC3B-205ENST00000423424 MS4A4AQ96JQ5 239 aa10.64□□□□□ -0.71
FNDC3B-205ENST00000423424 DEFB129Q9H1M3 183 aa10.64□□□□□ -0.71
FNDC3B-205ENST00000423424 HTATSF1O43719 755 aaKnown RBP10.63□□□□□ -0.71
FNDC3B-205ENST00000423424 PDIA6Q15084 440 aa10.63□□□□□ -0.71
FNDC3B-205ENST00000423424 DACT2Q5SW24 774 aa10.63□□□□□ -0.71
FNDC3B-205ENST00000423424 BRI3BPQ8WY22 251 aa10.63□□□□□ -0.71
FNDC3B-205ENST00000423424 RNF208Q9H0X6 261 aa10.63□□□□□ -0.71
FNDC3B-205ENST00000423424 CDH23Q9H251 3354 aa10.63□□□□□ -0.71
FNDC3B-205ENST00000423424 GRK4P32298 578 aa10.62□□□□□ -0.71
FNDC3B-205ENST00000423424 PROSER3Q2NL68 480 aa10.62□□□□□ -0.71
FNDC3B-205ENST00000423424 FAM43AQ8N2R8 423 aa10.62□□□□□ -0.71
FNDC3B-205ENST00000423424 PNISRQ8TF01 805 aaKnown RBP10.62□□□□□ -0.71
FNDC3B-205ENST00000423424 U2AF1L4Q8WU68 220 aaKnown RBP10.62□□□□□ -0.71
FNDC3B-205ENST00000423424 OPTNQ96CV9 577 aa10.62□□□□□ -0.71
FNDC3B-205ENST00000423424 GUCD1Q96NT3 240 aa10.62□□□□□ -0.71
FNDC3B-205ENST00000423424 MYO3BQ8WXR4 1341 aa10.61□□□□□ -0.71
FNDC3B-205ENST00000423424 TLR2O60603 784 aa10.61□□□□□ -0.71
FNDC3B-205ENST00000423424 ANXA1P04083 346 aa10.61□□□□□ -0.71
FNDC3B-205ENST00000423424 IREB2P48200 963 aaKnown RBP10.61□□□□□ -0.71
FNDC3B-205ENST00000423424 MMP14P50281 582 aa10.61□□□□□ -0.71
FNDC3B-205ENST00000423424 ANKRD13AQ8IZ07 590 aa10.61□□□□□ -0.71
FNDC3B-205ENST00000423424 TDHQ8IZJ6 230 aa10.61□□□□□ -0.71
FNDC3B-205ENST00000423424 FBXW7Q969H0 707 aa10.61□□□□□ -0.71
FNDC3B-205ENST00000423424 FAM122AQ96E09 287 aa10.61□□□□□ -0.71
FNDC3B-205ENST00000423424 FAM89AQ96GI7 184 aa10.61□□□□□ -0.71
FNDC3B-205ENST00000423424 ZBED3Q96IU2 234 aaPredicted RBP10.61□□□□□ -0.71
FNDC3B-205ENST00000423424 ELP3Q9H9T3 547 aa10.61□□□□□ -0.71
FNDC3B-205ENST00000423424 RIPOR2Q9Y4F9 1068 aa10.61□□□□□ -0.71
FNDC3B-205ENST00000423424 PPP2R3BQ9Y5P8 575 aa10.61□□□□□ -0.71
FNDC3B-205ENST00000423424 CCL15-CCL14A0A0B4J2E2 113 aa10.6□□□□□ -0.71
FNDC3B-205ENST00000423424 USP2O75604 605 aaPredicted RBP10.6□□□□□ -0.71
FNDC3B-205ENST00000423424 ECM2O94769 699 aaPredicted RBP10.6□□□□□ -0.71
FNDC3B-205ENST00000423424 SGPL1O95470 568 aa10.6□□□□□ -0.71
FNDC3B-205ENST00000423424 CCL15Q16663 113 aa10.6□□□□□ -0.71
FNDC3B-205ENST00000423424 SUPT20HL1Q3ZLR7 823 aa10.6□□□□□ -0.71
FNDC3B-205ENST00000423424 CC2D1BQ5T0F9 858 aaKnown RBP10.6□□□□□ -0.71
FNDC3B-205ENST00000423424 COPS6Q7L5N1 327 aa10.6□□□□□ -0.71
FNDC3B-205ENST00000423424 RAET1EQ8TD07 263 aa10.6□□□□□ -0.71
FNDC3B-205ENST00000423424 SRRDQ9UH36 339 aa10.6□□□□□ -0.71
FNDC3B-205ENST00000423424 IRS2Q9Y4H2 1338 aa10.59□□□□□ -0.71
FNDC3B-205ENST00000423424 WDHD1O75717 1129 aaPredicted RBP10.59□□□□□ -0.71
FNDC3B-205ENST00000423424 CTGFP29279 349 aa10.59□□□□□ -0.71
FNDC3B-205ENST00000423424 HOXD11P31277 338 aaPredicted RBP10.59□□□□□ -0.71
FNDC3B-205ENST00000423424 GTF2A2P52657 109 aa10.59□□□□□ -0.71
FNDC3B-205ENST00000423424 UBXN2AP68543 259 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms