RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 BRPF1P55201 1214 aaPredicted RBP19.55■□□□□ 0.72
SPC24-201ENST00000423327 DCAF8Q5TAQ9 597 aa19.55■□□□□ 0.72
SPC24-201ENST00000423327 CST9Q5W186 159 aa19.55■□□□□ 0.72
SPC24-201ENST00000423327 USP44Q9H0E7 712 aa19.55■□□□□ 0.72
SPC24-201ENST00000423327 RARSP54136 660 aaKnown RBP19.54■□□□□ 0.72
SPC24-201ENST00000423327 CCDC57Q2TAC2 916 aa19.54■□□□□ 0.72
SPC24-201ENST00000423327 DLK2Q6UY11 383 aa19.54■□□□□ 0.72
SPC24-201ENST00000423327 ZC3H15Q8WU90 426 aaKnown RBP19.54■□□□□ 0.72
SPC24-201ENST00000423327 MXD3Q9BW11 206 aa19.54■□□□□ 0.72
SPC24-201ENST00000423327 NOB1Q9ULX3 412 aaKnown RBP19.54■□□□□ 0.72
SPC24-201ENST00000423327 ASTN2O75129 1339 aaPredicted RBP19.53■□□□□ 0.72
SPC24-201ENST00000423327 USP17L3A6NCW0 530 aa19.53■□□□□ 0.72
SPC24-201ENST00000423327 USP17L4A6NCW7 530 aa19.53■□□□□ 0.72
SPC24-201ENST00000423327 ZNF280AP59817 542 aaPredicted RBP19.53■□□□□ 0.72
SPC24-201ENST00000423327 DACT2Q5SW24 774 aa19.53■□□□□ 0.72
SPC24-201ENST00000423327 USP17L1Q7RTZ2 530 aa19.53■□□□□ 0.72
SPC24-201ENST00000423327 AGBL3Q8NEM8 1001 aa19.53■□□□□ 0.72
SPC24-201ENST00000423327 PUS3Q9BZE2 481 aaKnown RBP19.53■□□□□ 0.72
SPC24-201ENST00000423327 COA1Q9GZY4 146 aa19.53■□□□□ 0.72
SPC24-201ENST00000423327 RASSF10A6NK89 507 aa19.52■□□□□ 0.72
SPC24-201ENST00000423327 KIF4BQ2VIQ3 1234 aa19.52■□□□□ 0.72
SPC24-201ENST00000423327 C15orf52Q6ZUT6 534 aaKnown RBP19.52■□□□□ 0.72
SPC24-201ENST00000423327 THSD7BQ9C0I4 1608 aa19.51■□□□□ 0.71
SPC24-201ENST00000423327 VEGFBP49765 207 aa19.51■□□□□ 0.71
SPC24-201ENST00000423327 RBM26Q5T8P6 1007 aaKnown RBP19.51■□□□□ 0.71
SPC24-201ENST00000423327 LDHAL6AQ6ZMR3 332 aa19.51■□□□□ 0.71
SPC24-201ENST00000423327 KCNJ4P48050 445 aa19.49■□□□□ 0.71
SPC24-201ENST00000423327 HNRNPUQ00839 825 aaKnown RBP eCLIP19.49■□□□□ 0.71
SPC24-201ENST00000423327 TAF7LQ5H9L4 462 aa19.49■□□□□ 0.71
SPC24-201ENST00000423327 STRIP1Q5VSL9 837 aa19.49■□□□□ 0.71
SPC24-201ENST00000423327 USP48Q86UV5 1035 aa19.49■□□□□ 0.71
SPC24-201ENST00000423327 KLHDC4Q8TBB5 520 aa19.49■□□□□ 0.71
SPC24-201ENST00000423327 CD209Q9NNX6 404 aa19.49■□□□□ 0.71
SPC24-201ENST00000423327 CNNM1Q9NRU3 951 aa19.49■□□□□ 0.71
SPC24-201ENST00000423327 GGA3Q9NZ52 723 aa19.49■□□□□ 0.71
SPC24-201ENST00000423327 RIPOR2Q9Y4F9 1068 aa19.49■□□□□ 0.71
SPC24-201ENST00000423327 ADM5C9JUS6 153 aa19.48■□□□□ 0.71
SPC24-201ENST00000423327 CELF2O95319 508 aaKnown RBP19.48■□□□□ 0.71
SPC24-201ENST00000423327 USP17L8P0C7I0 530 aa19.48■□□□□ 0.71
SPC24-201ENST00000423327 HSPA1AP0DMV8 641 aaKnown RBP19.48■□□□□ 0.71
SPC24-201ENST00000423327 HSPA1BP0DMV9 641 aaKnown RBP19.48■□□□□ 0.71
SPC24-201ENST00000423327 LRRC24Q50LG9 513 aa19.48■□□□□ 0.71
SPC24-201ENST00000423327 CDC37L1Q7L3B6 337 aa19.48■□□□□ 0.71
SPC24-201ENST00000423327 ABT1Q9ULW3 272 aaKnown RBP19.48■□□□□ 0.71
SPC24-201ENST00000423327 TNNQ9UQP3 1299 aa19.48■□□□□ 0.71
SPC24-201ENST00000423327 TLL2Q9Y6L7 1015 aa19.48■□□□□ 0.71
SPC24-201ENST00000423327 PLIN1O60240 522 aa19.47■□□□□ 0.71
SPC24-201ENST00000423327 RFX5P48382 616 aaPredicted RBP19.47■□□□□ 0.71
SPC24-201ENST00000423327 FBXW7Q969H0 707 aa19.47■□□□□ 0.71
SPC24-201ENST00000423327 MYOZ2Q9NPC6 264 aa19.47■□□□□ 0.71
SPC24-201ENST00000423327 GTF2IP78347 998 aa19.46■□□□□ 0.71
SPC24-201ENST00000423327 DEFB115Q30KQ5 88 aa19.46■□□□□ 0.71
SPC24-201ENST00000423327 KRT26Q7Z3Y9 468 aa19.46■□□□□ 0.71
SPC24-201ENST00000423327 CERS5Q8N5B7 392 aa19.46■□□□□ 0.71
SPC24-201ENST00000423327 VGLL2Q8N8G2 317 aa19.46■□□□□ 0.71
SPC24-201ENST00000423327 API5Q9BZZ5 524 aaKnown RBP19.46■□□□□ 0.71
SPC24-201ENST00000423327 KIF16BQ96L93 1317 aa19.46■□□□□ 0.71
SPC24-201ENST00000423327 BCAR3O75815 825 aa19.45■□□□□ 0.7
SPC24-201ENST00000423327 IL1R1P14778 569 aa19.45■□□□□ 0.7
SPC24-201ENST00000423327 SCARF1Q14162 830 aa19.45■□□□□ 0.7
SPC24-201ENST00000423327 TTLL5Q6EMB2 1281 aa19.45■□□□□ 0.7
SPC24-201ENST00000423327 SAPCD2Q86UD0 394 aa19.45■□□□□ 0.7
SPC24-201ENST00000423327 ZNF408Q9H9D4 720 aa19.45■□□□□ 0.7
SPC24-201ENST00000423327 MYO3BQ8WXR4 1341 aa19.45■□□□□ 0.7
SPC24-201ENST00000423327 ARAP2Q8WZ64 1704 aa19.45■□□□□ 0.7
SPC24-201ENST00000423327 ANGEL2Q5VTE6 544 aaKnown RBP19.44■□□□□ 0.7
SPC24-201ENST00000423327 ARHGAP45Q92619 1136 aa19.44■□□□□ 0.7
SPC24-201ENST00000423327 MEIS3Q99687 375 aa19.44■□□□□ 0.7
SPC24-201ENST00000423327 WDR33Q9C0J8 1336 aaKnown RBP19.44■□□□□ 0.7
SPC24-201ENST00000423327 TRIM27P14373 513 aa19.43■□□□□ 0.7
SPC24-201ENST00000423327 UBE4AQ14139 1066 aa19.43■□□□□ 0.7
SPC24-201ENST00000423327 NBPF9Q3BBW0 867 aa19.43■□□□□ 0.7
SPC24-201ENST00000423327 CYP4F22Q6NT55 531 aa19.43■□□□□ 0.7
SPC24-201ENST00000423327 ZNF804AQ7Z570 1209 aa19.43■□□□□ 0.7
SPC24-201ENST00000423327 KIAA0825Q8IV33 1275 aa19.43■□□□□ 0.7
SPC24-201ENST00000423327 DCPSQ96C86 337 aaKnown RBP19.43■□□□□ 0.7
SPC24-201ENST00000423327 SCAF8Q9UPN6 1271 aaKnown RBP19.43■□□□□ 0.7
SPC24-201ENST00000423327 MROH5Q6ZUA9 1318 aa19.43■□□□□ 0.7
SPC24-201ENST00000423327 UBTFL1P0CB47 393 aaPredicted RBP19.42■□□□□ 0.7
SPC24-201ENST00000423327 GYG1P46976 350 aa19.42■□□□□ 0.7
SPC24-201ENST00000423327 PTPN12Q05209 780 aaKnown RBP19.42■□□□□ 0.7
SPC24-201ENST00000423327 INTS3Q68E01 1043 aaKnown RBP19.42■□□□□ 0.7
SPC24-201ENST00000423327 JAG2Q9Y219 1238 aa19.42■□□□□ 0.7
SPC24-201ENST00000423327 WNT10BO00744 389 aa19.41■□□□□ 0.7
SPC24-201ENST00000423327 SASH1O94885 1247 aa19.41■□□□□ 0.7
SPC24-201ENST00000423327 ZBED3Q96IU2 234 aaPredicted RBP19.41■□□□□ 0.7
SPC24-201ENST00000423327 FAM84BQ96KN1 310 aaPredicted RBP19.41■□□□□ 0.7
SPC24-201ENST00000423327 CAPNS2Q96L46 248 aa19.41■□□□□ 0.7
SPC24-201ENST00000423327 LRRFIP2Q9Y608 721 aaKnown RBP19.41■□□□□ 0.7
SPC24-201ENST00000423327 ZBED9Q6R2W3 1325 aa19.41■□□□□ 0.7
SPC24-201ENST00000423327 METTL24Q5JXM2 366 aa19.4■□□□□ 0.7
SPC24-201ENST00000423327 TDRD7Q8NHU6 1098 aaKnown RBP19.4■□□□□ 0.7
SPC24-201ENST00000423327 CDCA5Q96FF9 252 aa19.4■□□□□ 0.7
SPC24-201ENST00000423327 PCDHAC2Q9Y5I4 1007 aa19.4■□□□□ 0.7
SPC24-201ENST00000423327 PITPNM2Q9BZ72 1349 aa19.4■□□□□ 0.7
SPC24-201ENST00000423327 ECM29Q5VYK3 1845 aa19.39■□□□□ 0.7
SPC24-201ENST00000423327 FOXN1O15353 648 aa19.39■□□□□ 0.69
SPC24-201ENST00000423327 FGFR2P21802 821 aa19.39■□□□□ 0.69
SPC24-201ENST00000423327 COL13A1Q5TAT6 717 aaPredicted RBP19.39■□□□□ 0.69
SPC24-201ENST00000423327 ATG9AQ7Z3C6 839 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms