RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 ZNF396Q96N95 335 aaPredicted RBP19.41■□□□□ 0.7
NPC1L1-203ENST00000423141 EPC1Q9H2F5 836 aa19.41■□□□□ 0.7
NPC1L1-203ENST00000423141 ORC3Q9UBD5 711 aaPredicted RBP19.41■□□□□ 0.7
NPC1L1-203ENST00000423141 LINS1Q8NG48 757 aa19.4■□□□□ 0.7
NPC1L1-203ENST00000423141 KIAA1468Q9P260 1216 aa19.4■□□□□ 0.7
NPC1L1-203ENST00000423141 OTUD7BQ6GQQ9 843 aa19.4■□□□□ 0.7
NPC1L1-203ENST00000423141 ABTB2Q8N961 1025 aa19.4■□□□□ 0.7
NPC1L1-203ENST00000423141 NEK11Q8NG66 645 aa19.4■□□□□ 0.7
NPC1L1-203ENST00000423141 U3KPZ7 1027 aaPredicted RBP19.4■□□□□ 0.7
NPC1L1-203ENST00000423141 PTPN21Q16825 1174 aa19.39■□□□□ 0.7
NPC1L1-203ENST00000423141 CHST3Q7LGC8 479 aa19.39■□□□□ 0.7
NPC1L1-203ENST00000423141 SETD1BQ9UPS6 1966 aaKnown RBP19.39■□□□□ 0.7
NPC1L1-203ENST00000423141 ETF1P62495 437 aaKnown RBP19.39■□□□□ 0.69
NPC1L1-203ENST00000423141 ISM2Q6H9L7 571 aa19.39■□□□□ 0.69
NPC1L1-203ENST00000423141 DDX46Q7L014 1031 aaKnown RBP19.39■□□□□ 0.69
NPC1L1-203ENST00000423141 C14orf37Q86TY3 774 aa19.39■□□□□ 0.69
NPC1L1-203ENST00000423141 UBXN4Q92575 508 aa19.39■□□□□ 0.69
NPC1L1-203ENST00000423141 AMOTL2Q9Y2J4 779 aa19.39■□□□□ 0.69
NPC1L1-203ENST00000423141 CCDC9Q9Y3X0 531 aaKnown RBP19.39■□□□□ 0.69
NPC1L1-203ENST00000423141 IGKV5-2P06315 115 aa19.39■□□□□ 0.69
NPC1L1-203ENST00000423141 ATP1A3P13637 1013 aa19.39■□□□□ 0.69
NPC1L1-203ENST00000423141 LMOD1P29536 600 aaPredicted RBP19.39■□□□□ 0.69
NPC1L1-203ENST00000423141 FAM193AP78312 1265 aa19.39■□□□□ 0.69
NPC1L1-203ENST00000423141 GOLGA8FQ08AF8 430 aa19.39■□□□□ 0.69
NPC1L1-203ENST00000423141 GOLGA8DPQ0D2H9 430 aa19.39■□□□□ 0.69
NPC1L1-203ENST00000423141 NCAPHQ15003 741 aa19.39■□□□□ 0.69
NPC1L1-203ENST00000423141 ZNF530Q6P9A1 599 aaPredicted RBP19.39■□□□□ 0.69
NPC1L1-203ENST00000423141 TMCO3Q6UWJ1 677 aa19.39■□□□□ 0.69
NPC1L1-203ENST00000423141 CLIC4Q9Y696 253 aa19.38■□□□□ 0.69
NPC1L1-203ENST00000423141 UTYO14607 1347 aa19.38■□□□□ 0.69
NPC1L1-203ENST00000423141 SALL1Q9NSC2 1324 aa19.38■□□□□ 0.69
NPC1L1-203ENST00000423141 TRIM65Q6PJ69 517 aa19.38■□□□□ 0.69
NPC1L1-203ENST00000423141 DHX32Q7L7V1 743 aaKnown RBP19.38■□□□□ 0.69
NPC1L1-203ENST00000423141 CREBRFQ8IUR6 639 aa19.38■□□□□ 0.69
NPC1L1-203ENST00000423141 ZCCHC17Q9NP64 241 aaKnown RBP19.38■□□□□ 0.69
NPC1L1-203ENST00000423141 HDAC5Q9UQL6 1122 aa19.38■□□□□ 0.69
NPC1L1-203ENST00000423141 MARF1Q9Y4F3 1742 aaKnown RBP19.37■□□□□ 0.69
NPC1L1-203ENST00000423141 ATP5JP18859 108 aa19.37■□□□□ 0.69
NPC1L1-203ENST00000423141 ST5P78524 1137 aa19.37■□□□□ 0.69
NPC1L1-203ENST00000423141 ZRSR1Q15695 479 aaKnown RBP19.37■□□□□ 0.69
NPC1L1-203ENST00000423141 MCMDC2Q4G0Z9 681 aa19.37■□□□□ 0.69
NPC1L1-203ENST00000423141 ADALQ6DHV7 355 aa19.37■□□□□ 0.69
NPC1L1-203ENST00000423141 ESF1Q9H501 851 aaKnown RBP19.37■□□□□ 0.69
NPC1L1-203ENST00000423141 ABCC6O95255 1503 aa19.37■□□□□ 0.69
NPC1L1-203ENST00000423141 SASH3O75995 380 aa19.37■□□□□ 0.69
NPC1L1-203ENST00000423141 TFCP2Q12800 502 aa19.37■□□□□ 0.69
NPC1L1-203ENST00000423141 CARD6Q9BX69 1037 aa19.37■□□□□ 0.69
NPC1L1-203ENST00000423141 CHMP4AQ9BY43 222 aa19.37■□□□□ 0.69
NPC1L1-203ENST00000423141 TADA3O75528 432 aa19.36■□□□□ 0.69
NPC1L1-203ENST00000423141 URI1O94763 535 aaPredicted RBP19.36■□□□□ 0.69
NPC1L1-203ENST00000423141 POLR3DP05423 398 aaPredicted RBP19.36■□□□□ 0.69
NPC1L1-203ENST00000423141 NCAPD2Q15021 1401 aa19.36■□□□□ 0.69
NPC1L1-203ENST00000423141 LRRC59Q96AG4 307 aaKnown RBP19.36■□□□□ 0.69
NPC1L1-203ENST00000423141 CARMIL3Q8ND23 1372 aa19.36■□□□□ 0.69
NPC1L1-203ENST00000423141 TNRQ92752 1358 aa19.36■□□□□ 0.69
NPC1L1-203ENST00000423141 FDPSP14324 419 aaKnown RBP19.36■□□□□ 0.69
NPC1L1-203ENST00000423141 KCNJ6P48051 423 aa19.36■□□□□ 0.69
NPC1L1-203ENST00000423141 LINC00301Q8NCQ3 95 aa19.36■□□□□ 0.69
NPC1L1-203ENST00000423141 MNS1Q8NEH6 495 aa19.36■□□□□ 0.69
NPC1L1-203ENST00000423141 DPF2Q92785 391 aa19.36■□□□□ 0.69
NPC1L1-203ENST00000423141 HSD3B7Q9H2F3 369 aa19.36■□□□□ 0.69
NPC1L1-203ENST00000423141 RTEL1Q9NZ71 1219 aa19.36■□□□□ 0.69
NPC1L1-203ENST00000423141 TNNI3KQ59H18 835 aa19.35■□□□□ 0.69
NPC1L1-203ENST00000423141 ATL3Q6DD88 541 aa19.35■□□□□ 0.69
NPC1L1-203ENST00000423141 BPIFA3Q9BQP9 254 aa19.35■□□□□ 0.69
NPC1L1-203ENST00000423141 DBNDD2Q9BQY9 259 aa19.35■□□□□ 0.69
NPC1L1-203ENST00000423141 FPGT-TNNI3KV9GXZ4 949 aa19.35■□□□□ 0.69
NPC1L1-203ENST00000423141 PHLPP2Q6ZVD8 1323 aa19.35■□□□□ 0.69
NPC1L1-203ENST00000423141 LAMA4Q16363 1823 aa19.35■□□□□ 0.69
NPC1L1-203ENST00000423141 PDIA3P30101 505 aaKnown RBP19.35■□□□□ 0.69
NPC1L1-203ENST00000423141 FANCCQ00597 558 aa19.35■□□□□ 0.69
NPC1L1-203ENST00000423141 EXOSC10Q01780 885 aaKnown RBP19.35■□□□□ 0.69
NPC1L1-203ENST00000423141 RAD51AP2Q09MP3 1159 aa19.35■□□□□ 0.69
NPC1L1-203ENST00000423141 SF3A1Q15459 793 aaKnown RBP19.35■□□□□ 0.69
NPC1L1-203ENST00000423141 FAM177A1Q8N128 213 aaPredicted RBP19.35■□□□□ 0.69
NPC1L1-203ENST00000423141 ARGLU1Q9NWB6 273 aaPredicted RBP19.35■□□□□ 0.69
NPC1L1-203ENST00000423141 STK38Q15208 465 aa19.34■□□□□ 0.69
NPC1L1-203ENST00000423141 SMARCE1Q969G3 411 aa19.34■□□□□ 0.69
NPC1L1-203ENST00000423141 GPHNQ9NQX3 736 aaPredicted RBP19.34■□□□□ 0.69
NPC1L1-203ENST00000423141 GJB4Q9NTQ9 266 aa19.34■□□□□ 0.69
NPC1L1-203ENST00000423141 PARP3Q9Y6F1 533 aa19.34■□□□□ 0.69
NPC1L1-203ENST00000423141 DIP2AQ14689 1571 aa19.34■□□□□ 0.69
NPC1L1-203ENST00000423141 A0A1W2PQ27 194 aa19.34■□□□□ 0.69
NPC1L1-203ENST00000423141 A0A1W2PQ64 194 aa19.34■□□□□ 0.69
NPC1L1-203ENST00000423141 A0A1W2PQD8 194 aa19.34■□□□□ 0.69
NPC1L1-203ENST00000423141 SLC3A2P08195 630 aaKnown RBP19.34■□□□□ 0.69
NPC1L1-203ENST00000423141 FAM69CQ0P6D2 419 aa19.34■□□□□ 0.69
NPC1L1-203ENST00000423141 AKAP4Q5JQC9 854 aa19.34■□□□□ 0.69
NPC1L1-203ENST00000423141 UTP14AQ9BVJ6 771 aaKnown RBP19.34■□□□□ 0.69
NPC1L1-203ENST00000423141 NLRP12P59046 1061 aa19.33■□□□□ 0.69
NPC1L1-203ENST00000423141 TMX1Q9H3N1 280 aa19.33■□□□□ 0.69
NPC1L1-203ENST00000423141 MRC1P22897 1456 aa19.33■□□□□ 0.68
NPC1L1-203ENST00000423141 RNMTO43148 476 aaKnown RBP19.33■□□□□ 0.68
NPC1L1-203ENST00000423141 TBC1D8O95759 1140 aa19.33■□□□□ 0.68
NPC1L1-203ENST00000423141 REXO1L1PQ8IX06 675 aa19.33■□□□□ 0.68
NPC1L1-203ENST00000423141 NFATC2IPQ8NCF5 419 aa19.33■□□□□ 0.68
NPC1L1-203ENST00000423141 CCDC34Q96HJ3 373 aa19.33■□□□□ 0.68
NPC1L1-203ENST00000423141 UBR1Q8IWV7 1749 aa19.32■□□□□ 0.68
NPC1L1-203ENST00000423141 NRDCO43847 1150 aa19.32■□□□□ 0.68
NPC1L1-203ENST00000423141 ZNF202O95125 648 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms