RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 SUCLG2Q96I99 432 aa27.6■■■□□ 2.01
TRAF4-204ENST00000422344 CNOT7Q9UIV1 285 aaKnown RBP27.6■■■□□ 2.01
TRAF4-204ENST00000422344 TSKSQ9UJT2 592 aa27.6■■■□□ 2.01
TRAF4-204ENST00000422344 LEMD3Q9Y2U8 911 aa27.6■■■□□ 2.01
TRAF4-204ENST00000422344 MED23Q9ULK4 1368 aa27.6■■■□□ 2.01
TRAF4-204ENST00000422344 SHTN1A0MZ66 631 aa27.59■■■□□ 2.01
TRAF4-204ENST00000422344 ZC3H15Q8WU90 426 aaKnown RBP27.59■■■□□ 2.01
TRAF4-204ENST00000422344 ZBTB12Q9Y330 459 aaPredicted RBP27.59■■■□□ 2.01
TRAF4-204ENST00000422344 UTYO14607 1347 aa27.59■■■□□ 2.01
TRAF4-204ENST00000422344 H7C1D1 291 aa27.58■■■□□ 2.01
TRAF4-204ENST00000422344 API5Q9BZZ5 524 aaKnown RBP27.58■■■□□ 2.01
TRAF4-204ENST00000422344 NOB1Q9ULX3 412 aaKnown RBP27.58■■■□□ 2.01
TRAF4-204ENST00000422344 RPS12P25398 132 aaKnown RBP27.57■■■□□ 2
TRAF4-204ENST00000422344 RARSP54136 660 aaKnown RBP27.57■■■□□ 2
TRAF4-204ENST00000422344 CHRNDQ07001 517 aa27.57■■■□□ 2
TRAF4-204ENST00000422344 CDC37L1Q7L3B6 337 aa27.57■■■□□ 2
TRAF4-204ENST00000422344 DPF2Q92785 391 aa27.57■■■□□ 2
TRAF4-204ENST00000422344 KCNQ5Q9NR82 932 aa27.57■■■□□ 2
TRAF4-204ENST00000422344 ZNF804BA4D1E1 1349 aa27.57■■■□□ 2
TRAF4-204ENST00000422344 BRPF1P55201 1214 aaPredicted RBP27.56■■■□□ 2
TRAF4-204ENST00000422344 MICALL2Q8IY33 904 aa27.56■■■□□ 2
TRAF4-204ENST00000422344 PODNQ7Z5L7 613 aa27.55■■■□□ 2
TRAF4-204ENST00000422344 HHIPL1Q96JK4 782 aa27.55■■■□□ 2
TRAF4-204ENST00000422344 CNNM1Q9NRU3 951 aa27.55■■■□□ 2
TRAF4-204ENST00000422344 KIF16BQ96L93 1317 aa27.55■■■□□ 2
TRAF4-204ENST00000422344 WTIPA6NIX2 430 aaPredicted RBP27.54■■■□□ 2
TRAF4-204ENST00000422344 LDHAL6AQ6ZMR3 332 aa27.54■■■□□ 2
TRAF4-204ENST00000422344 ZNF594Q96JF6 807 aaPredicted RBP27.54■■■□□ 2
TRAF4-204ENST00000422344 VIL1P09327 827 aaKnown RBP27.53■■■□□ 2
TRAF4-204ENST00000422344 USP48Q86UV5 1035 aa27.53■■■□□ 2
TRAF4-204ENST00000422344 KAZALD1Q96I82 304 aa27.53■■■□□ 2
TRAF4-204ENST00000422344 BICC1Q9H694 974 aaKnown RBP27.53■■■□□ 2
TRAF4-204ENST00000422344 CCDC85CA6NKD9 419 aa27.52■■■□□ 2
TRAF4-204ENST00000422344 SAMD7Q7Z3H4 446 aa27.52■■■□□ 2
TRAF4-204ENST00000422344 COA1Q9GZY4 146 aa27.52■■■□□ 2
TRAF4-204ENST00000422344 USP44Q9H0E7 712 aa27.52■■■□□ 2
TRAF4-204ENST00000422344 USP17L3A6NCW0 530 aa27.51■■□□□ 1.99
TRAF4-204ENST00000422344 USP17L4A6NCW7 530 aa27.51■■□□□ 1.99
TRAF4-204ENST00000422344 TAF5LO75529 589 aa27.51■■□□□ 1.99
TRAF4-204ENST00000422344 DLK2Q6UY11 383 aa27.51■■□□□ 1.99
TRAF4-204ENST00000422344 USP17L1Q7RTZ2 530 aa27.51■■□□□ 1.99
TRAF4-204ENST00000422344 HELBQ8NG08 1087 aaPredicted RBP27.51■■□□□ 1.99
TRAF4-204ENST00000422344 SCN9AQ15858 1988 aa27.51■■□□□ 1.99
TRAF4-204ENST00000422344 CASP8AP2Q9UKL3 1982 aa27.5■■□□□ 1.99
TRAF4-204ENST00000422344 CA12O43570 354 aa27.5■■□□□ 1.99
TRAF4-204ENST00000422344 RSBN1LQ6PCB5 846 aaPredicted RBP27.5■■□□□ 1.99
TRAF4-204ENST00000422344 PLIN1O60240 522 aa27.49■■□□□ 1.99
TRAF4-204ENST00000422344 RABL6Q3YEC7 729 aaPredicted RBP27.49■■□□□ 1.99
TRAF4-204ENST00000422344 TBC1D10BQ4KMP7 808 aaPredicted RBP27.49■■□□□ 1.99
TRAF4-204ENST00000422344 TXNRD3Q86VQ6 643 aa27.49■■□□□ 1.99
TRAF4-204ENST00000422344 AGBL3Q8NEM8 1001 aa27.49■■□□□ 1.99
TRAF4-204ENST00000422344 FBXW7Q969H0 707 aa27.49■■□□□ 1.99
TRAF4-204ENST00000422344 POLR2AP24928 1970 aaKnown RBP27.49■■□□□ 1.99
TRAF4-204ENST00000422344 IPO8O15397 1037 aaKnown RBP27.48■■□□□ 1.99
TRAF4-204ENST00000422344 KLRK1P26718 216 aa27.48■■□□□ 1.99
TRAF4-204ENST00000422344 ANKRD44Q8N8A2 993 aa27.48■■□□□ 1.99
TRAF4-204ENST00000422344 ARHGAP45Q92619 1136 aa27.48■■□□□ 1.99
TRAF4-204ENST00000422344 EGFRP00533 1210 aa27.47■■□□□ 1.99
TRAF4-204ENST00000422344 UBTFL1P0CB47 393 aaPredicted RBP27.47■■□□□ 1.99
TRAF4-204ENST00000422344 HUNKP57058 714 aa27.47■■□□□ 1.99
TRAF4-204ENST00000422344 RBM26Q5T8P6 1007 aaKnown RBP27.47■■□□□ 1.99
TRAF4-204ENST00000422344 PSME4Q14997 1843 aa27.46■■□□□ 1.99
TRAF4-204ENST00000422344 ZBED9Q6R2W3 1325 aa27.46■■□□□ 1.99
TRAF4-204ENST00000422344 KRT26Q7Z3Y9 468 aa27.46■■□□□ 1.99
TRAF4-204ENST00000422344 ZIC5Q96T25 663 aa27.46■■□□□ 1.99
TRAF4-204ENST00000422344 HDAC5Q9UQL6 1122 aa27.46■■□□□ 1.99
TRAF4-204ENST00000422344 ZNF609O15014 1411 aa27.46■■□□□ 1.99
TRAF4-204ENST00000422344 A0A1B0GUL6 1792 aa27.45■■□□□ 1.99
TRAF4-204ENST00000422344 NOGQ13253 232 aa27.45■■□□□ 1.98
TRAF4-204ENST00000422344 FRAT1Q92837 279 aaPredicted RBP27.45■■□□□ 1.98
TRAF4-204ENST00000422344 SNAP23O00161 211 aa27.44■■□□□ 1.98
TRAF4-204ENST00000422344 KIF4BQ2VIQ3 1234 aa27.44■■□□□ 1.98
TRAF4-204ENST00000422344 ZNF804AQ7Z570 1209 aa27.44■■□□□ 1.98
TRAF4-204ENST00000422344 MCOLN1Q9GZU1 580 aa27.44■■□□□ 1.98
TRAF4-204ENST00000422344 MROH5Q6ZUA9 1318 aa27.43■■□□□ 1.98
TRAF4-204ENST00000422344 USP17L8P0C7I0 530 aa27.43■■□□□ 1.98
TRAF4-204ENST00000422344 STRIP1Q5VSL9 837 aa27.43■■□□□ 1.98
TRAF4-204ENST00000422344 C15orf52Q6ZUT6 534 aaKnown RBP27.43■■□□□ 1.98
TRAF4-204ENST00000422344 PUS3Q9BZE2 481 aaKnown RBP27.43■■□□□ 1.98
TRAF4-204ENST00000422344 MYO3BQ8WXR4 1341 aa27.42■■□□□ 1.98
TRAF4-204ENST00000422344 ADM5C9JUS6 153 aa27.42■■□□□ 1.98
TRAF4-204ENST00000422344 BCAR3O75815 825 aa27.42■■□□□ 1.98
TRAF4-204ENST00000422344 DCPSQ96C86 337 aaKnown RBP27.42■■□□□ 1.98
TRAF4-204ENST00000422344 CD209Q9NNX6 404 aa27.42■■□□□ 1.98
TRAF4-204ENST00000422344 ZNF280AP59817 542 aaPredicted RBP27.41■■□□□ 1.98
TRAF4-204ENST00000422344 MLLT1Q03111 559 aaPredicted RBP27.41■■□□□ 1.98
TRAF4-204ENST00000422344 DACT2Q5SW24 774 aa27.41■■□□□ 1.98
TRAF4-204ENST00000422344 TTLL5Q6EMB2 1281 aa27.41■■□□□ 1.98
TRAF4-204ENST00000422344 GBA2Q9HCG7 927 aaPredicted RBP27.41■■□□□ 1.98
TRAF4-204ENST00000422344 RGMBQ6NW40 437 aa27.4■■□□□ 1.98
TRAF4-204ENST00000422344 ATF7IPQ6VMQ6 1270 aa27.4■■□□□ 1.98
TRAF4-204ENST00000422344 C2orf69Q8N8R5 385 aa27.4■■□□□ 1.98
TRAF4-204ENST00000422344 GMLQ99445 158 aa27.4■■□□□ 1.98
TRAF4-204ENST00000422344 RIPOR2Q9Y4F9 1068 aa27.4■■□□□ 1.98
TRAF4-204ENST00000422344 GTF2IP78347 998 aa27.39■■□□□ 1.98
TRAF4-204ENST00000422344 DGKZQ13574 1117 aa27.39■■□□□ 1.98
TRAF4-204ENST00000422344 UBE4AQ14139 1066 aa27.39■■□□□ 1.98
TRAF4-204ENST00000422344 METTL24Q5JXM2 366 aa27.39■■□□□ 1.98
TRAF4-204ENST00000422344 INTS3Q68E01 1043 aaKnown RBP27.39■■□□□ 1.98
TRAF4-204ENST00000422344 OGFOD1Q8N543 542 aa27.39■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms