RNA–Protein interactions for RNA: ENST00000421704.5

LINC00472-202, long intergenic non-protein coding RNA 472, humanhuman

TSL 2

Gene LINC00472, Length 451 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-202ENST00000421704 PARP3Q9Y6F1 533 aa18.36■□□□□ 0.53
LINC00472-202ENST00000421704 PDS5AQ29RF7 1337 aaKnown RBP18.35■□□□□ 0.53
LINC00472-202ENST00000421704 CCDC171Q6TFL3 1326 aa18.35■□□□□ 0.53
LINC00472-202ENST00000421704 RNF113AO15541 343 aaKnown RBP18.35■□□□□ 0.53
LINC00472-202ENST00000421704 BBOX1O75936 387 aa18.35■□□□□ 0.53
LINC00472-202ENST00000421704 ADORA1P30542 326 aa18.35■□□□□ 0.53
LINC00472-202ENST00000421704 HOXA10P31260 410 aaPredicted RBP18.35■□□□□ 0.53
LINC00472-202ENST00000421704 FKBP4Q02790 459 aaKnown RBP eCLIP18.35■□□□□ 0.53
LINC00472-202ENST00000421704 SLC15A2Q16348 729 aa18.35■□□□□ 0.53
LINC00472-202ENST00000421704 CRAMP1Q96RY5 1269 aa18.35■□□□□ 0.53
LINC00472-202ENST00000421704 KIF2CQ99661 725 aa18.35■□□□□ 0.53
LINC00472-202ENST00000421704 LSG1Q9H089 658 aaKnown RBP18.35■□□□□ 0.53
LINC00472-202ENST00000421704 HMG20BQ9P0W2 317 aa18.35■□□□□ 0.53
LINC00472-202ENST00000421704 LEMD3Q9Y2U8 911 aa18.35■□□□□ 0.53
LINC00472-202ENST00000421704 MYH7P12883 1935 aa18.34■□□□□ 0.53
LINC00472-202ENST00000421704 ZKSCAN1P17029 563 aaPredicted RBP18.34■□□□□ 0.53
LINC00472-202ENST00000421704 PDE6BP35913 854 aa18.34■□□□□ 0.53
LINC00472-202ENST00000421704 KCNJ4P48050 445 aa18.34■□□□□ 0.53
LINC00472-202ENST00000421704 CELF1Q92879 486 aaKnown RBP18.34■□□□□ 0.53
LINC00472-202ENST00000421704 PNPLA7Q6ZV29 1317 aa18.33■□□□□ 0.53
LINC00472-202ENST00000421704 C3orf67Q6ZVT6 689 aa18.33■□□□□ 0.52
LINC00472-202ENST00000421704 MAP4K1Q92918 833 aa18.33■□□□□ 0.52
LINC00472-202ENST00000421704 ZNF804BA4D1E1 1349 aa18.32■□□□□ 0.52
LINC00472-202ENST00000421704 AKAP11Q9UKA4 1901 aa18.32■□□□□ 0.52
LINC00472-202ENST00000421704 ZMYM1Q5SVZ6 1142 aa18.32■□□□□ 0.52
LINC00472-202ENST00000421704 SPATA5Q8NB90 893 aa18.32■□□□□ 0.52
LINC00472-202ENST00000421704 HELBQ8NG08 1087 aaPredicted RBP18.32■□□□□ 0.52
LINC00472-202ENST00000421704 KCNB2Q92953 911 aa18.32■□□□□ 0.52
LINC00472-202ENST00000421704 TBC1D2Q9BYX2 928 aa18.32■□□□□ 0.52
LINC00472-202ENST00000421704 U3KPZ7 1027 aaPredicted RBP18.32■□□□□ 0.52
LINC00472-202ENST00000421704 XDHP47989 1333 aa18.31■□□□□ 0.52
LINC00472-202ENST00000421704 DOCK2Q92608 1830 aa18.31■□□□□ 0.52
LINC00472-202ENST00000421704 A0A0D9SFI3 127 aa18.31■□□□□ 0.52
LINC00472-202ENST00000421704 TAF5LO75529 589 aa18.31■□□□□ 0.52
LINC00472-202ENST00000421704 ALDH1B1P30837 517 aa18.31■□□□□ 0.52
LINC00472-202ENST00000421704 MCAMP43121 646 aa18.31■□□□□ 0.52
LINC00472-202ENST00000421704 ZAP70P43403 619 aa18.31■□□□□ 0.52
LINC00472-202ENST00000421704 DDR1Q08345 913 aa18.31■□□□□ 0.52
LINC00472-202ENST00000421704 MAP3K12Q12852 859 aa18.31■□□□□ 0.52
LINC00472-202ENST00000421704 KRT32Q14532 448 aa18.31■□□□□ 0.52
LINC00472-202ENST00000421704 UBE3CQ15386 1083 aa18.31■□□□□ 0.52
LINC00472-202ENST00000421704 EZH2Q15910 746 aaKnown RBP18.31■□□□□ 0.52
LINC00472-202ENST00000421704 VPS37DQ86XT2 251 aa18.31■□□□□ 0.52
LINC00472-202ENST00000421704 SLC16A10Q8TF71 515 aa18.31■□□□□ 0.52
LINC00472-202ENST00000421704 APPBP2Q92624 585 aa18.31■□□□□ 0.52
LINC00472-202ENST00000421704 FAM227BQ96M60 508 aa18.31■□□□□ 0.52
LINC00472-202ENST00000421704 DSCC1Q9BVC3 393 aa18.31■□□□□ 0.52
LINC00472-202ENST00000421704 TM6SF1Q9BZW5 370 aa18.31■□□□□ 0.52
LINC00472-202ENST00000421704 DENND2AQ9ULE3 1009 aa18.31■□□□□ 0.52
LINC00472-202ENST00000421704 PSMA5P28066 241 aa18.3■□□□□ 0.52
LINC00472-202ENST00000421704 PHKA1P46020 1223 aa18.3■□□□□ 0.52
LINC00472-202ENST00000421704 EN1Q05925 392 aaPredicted RBP18.3■□□□□ 0.52
LINC00472-202ENST00000421704 C15orf52Q6ZUT6 534 aaKnown RBP18.3■□□□□ 0.52
LINC00472-202ENST00000421704 TMX4Q9H1E5 349 aaPredicted RBP18.3■□□□□ 0.52
LINC00472-202ENST00000421704 DUOX1Q9NRD9 1551 aa18.3■□□□□ 0.52
LINC00472-202ENST00000421704 K7ELQ4 463 aaPredicted RBP18.29■□□□□ 0.52
LINC00472-202ENST00000421704 NPR1P16066 1061 aa18.29■□□□□ 0.52
LINC00472-202ENST00000421704 ATP2B4P23634 1241 aa18.29■□□□□ 0.52
LINC00472-202ENST00000421704 NECTIN1Q15223 517 aa18.29■□□□□ 0.52
LINC00472-202ENST00000421704 TSGA10IPQ3SY00 556 aa18.29■□□□□ 0.52
LINC00472-202ENST00000421704 EDC3Q96F86 508 aaKnown RBP18.29■□□□□ 0.52
LINC00472-202ENST00000421704 WASHC4Q2M389 1173 aa18.28■□□□□ 0.52
LINC00472-202ENST00000421704 CTNNA3Q9UI47 895 aa18.28■□□□□ 0.52
LINC00472-202ENST00000421704 LRRC37AA6NMS7 1700 aa18.28■□□□□ 0.52
LINC00472-202ENST00000421704 CYP2E1P05181 493 aaPredicted RBP18.27■□□□□ 0.52
LINC00472-202ENST00000421704 MMP10P09238 476 aa18.27■□□□□ 0.52
LINC00472-202ENST00000421704 ADD2P35612 726 aa18.27■□□□□ 0.52
LINC00472-202ENST00000421704 FBXO33Q7Z6M2 555 aa18.27■□□□□ 0.52
LINC00472-202ENST00000421704 ZGPATQ8N5A5 531 aaKnown RBP18.27■□□□□ 0.52
LINC00472-202ENST00000421704 IL25Q9H293 177 aa18.27■□□□□ 0.52
LINC00472-202ENST00000421704 PODXL2Q9NZ53 605 aa18.27■□□□□ 0.52
LINC00472-202ENST00000421704 RBM8AQ9Y5S9 174 aaKnown RBP18.27■□□□□ 0.52
LINC00472-202ENST00000421704 HIBADHP31937 336 aaKnown RBP18.26■□□□□ 0.51
LINC00472-202ENST00000421704 RASGRF1Q13972 1273 aa18.26■□□□□ 0.51
LINC00472-202ENST00000421704 SCARF1Q14162 830 aa18.26■□□□□ 0.51
LINC00472-202ENST00000421704 MASTLQ96GX5 879 aa18.26■□□□□ 0.51
LINC00472-202ENST00000421704 ANTXR1Q9H6X2 564 aa18.26■□□□□ 0.51
LINC00472-202ENST00000421704 ANKIB1Q9P2G1 1089 aa18.26■□□□□ 0.51
LINC00472-202ENST00000421704 SNX14Q9Y5W7 946 aa18.26■□□□□ 0.51
LINC00472-202ENST00000421704 TAF1P21675 1872 aa18.26■□□□□ 0.51
LINC00472-202ENST00000421704 ANKRD31Q8N7Z5 1873 aa18.26■□□□□ 0.51
LINC00472-202ENST00000421704 MYH13Q9UKX3 1938 aa18.25■□□□□ 0.51
LINC00472-202ENST00000421704 EP400Q96L91 3159 aa18.25■□□□□ 0.51
LINC00472-202ENST00000421704 SP8Q8IXZ3 490 aa18.25■□□□□ 0.51
LINC00472-202ENST00000421704 RPAP1Q9BWH6 1393 aaPredicted RBP18.25■□□□□ 0.51
LINC00472-202ENST00000421704 COL4A1P02462 1669 aa18.25■□□□□ 0.51
LINC00472-202ENST00000421704 HSP90AA1P07900 732 aaKnown RBP18.24■□□□□ 0.51
LINC00472-202ENST00000421704 HMGB1P09429 215 aaKnown RBP18.24■□□□□ 0.51
LINC00472-202ENST00000421704 SRGNP10124 158 aa18.24■□□□□ 0.51
LINC00472-202ENST00000421704 GNAT2P19087 354 aa18.24■□□□□ 0.51
LINC00472-202ENST00000421704 BCAMP50895 628 aa18.24■□□□□ 0.51
LINC00472-202ENST00000421704 NEK4P51957 841 aa18.24■□□□□ 0.51
LINC00472-202ENST00000421704 PTH1RQ03431 593 aa18.24■□□□□ 0.51
LINC00472-202ENST00000421704 SLC9C2Q5TAH2 1124 aa18.24■□□□□ 0.51
LINC00472-202ENST00000421704 CREB3L3Q68CJ9 461 aa18.24■□□□□ 0.51
LINC00472-202ENST00000421704 SPTY2D1Q68D10 685 aaPredicted RBP18.24■□□□□ 0.51
LINC00472-202ENST00000421704 ZNF804AQ7Z570 1209 aa18.24■□□□□ 0.51
LINC00472-202ENST00000421704 CCDC24Q8N4L8 307 aa18.24■□□□□ 0.51
LINC00472-202ENST00000421704 FAM84BQ96KN1 310 aaPredicted RBP18.24■□□□□ 0.51
LINC00472-202ENST00000421704 NDUFB9Q9Y6M9 179 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms