RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 CELF1Q92879 486 aaKnown RBP11.99□□□□□ -0.49
TRIM39-206ENST00000420746 TRMT112Q9UI30 125 aaKnown RBP11.99□□□□□ -0.49
TRIM39-206ENST00000420746 USP17L3A6NCW0 530 aa11.98□□□□□ -0.49
TRIM39-206ENST00000420746 USP17L4A6NCW7 530 aa11.98□□□□□ -0.49
TRIM39-206ENST00000420746 USP17L1Q7RTZ2 530 aa11.98□□□□□ -0.49
TRIM39-206ENST00000420746 OGFOD1Q8N543 542 aa11.98□□□□□ -0.49
TRIM39-206ENST00000420746 SPTBN5Q9NRC6 3674 aaKnown RBP11.97□□□□□ -0.49
TRIM39-206ENST00000420746 MYO3BQ8WXR4 1341 aa11.97□□□□□ -0.49
TRIM39-206ENST00000420746 BMP8BP34820 402 aa11.97□□□□□ -0.49
TRIM39-206ENST00000420746 GJA8P48165 433 aa11.97□□□□□ -0.49
TRIM39-206ENST00000420746 EIF4A1P60842 406 aaKnown RBP11.97□□□□□ -0.49
TRIM39-206ENST00000420746 PTPN18Q99952 460 aa11.97□□□□□ -0.49
TRIM39-206ENST00000420746 MTMR10Q9NXD2 777 aa11.97□□□□□ -0.49
TRIM39-206ENST00000420746 PPP1R12BO60237 982 aaPredicted RBP11.96□□□□□ -0.49
TRIM39-206ENST00000420746 UFL1O94874 794 aa11.96□□□□□ -0.49
TRIM39-206ENST00000420746 CAPN2P17655 700 aa11.96□□□□□ -0.49
TRIM39-206ENST00000420746 PRKG1Q13976 671 aa11.96□□□□□ -0.49
TRIM39-206ENST00000420746 LRIT3Q3SXY7 679 aa11.96□□□□□ -0.49
TRIM39-206ENST00000420746 SH3TC2Q8TF17 1288 aa11.96□□□□□ -0.49
TRIM39-206ENST00000420746 GGA1Q9UJY5 639 aa11.96□□□□□ -0.49
TRIM39-206ENST00000420746 PPP2R3BQ9Y5P8 575 aa11.96□□□□□ -0.49
TRIM39-206ENST00000420746 TAF1P21675 1872 aa11.95□□□□□ -0.5
TRIM39-206ENST00000420746 MYCP01106 439 aaPredicted RBP11.95□□□□□ -0.5
TRIM39-206ENST00000420746 GJB1P08034 283 aa11.95□□□□□ -0.5
TRIM39-206ENST00000420746 RPS8P62241 208 aaKnown RBP11.95□□□□□ -0.5
TRIM39-206ENST00000420746 DCTN1Q14203 1278 aa11.95□□□□□ -0.5
TRIM39-206ENST00000420746 CLMNQ96JQ2 1002 aa11.95□□□□□ -0.5
TRIM39-206ENST00000420746 ZFYVE28Q9HCC9 887 aa11.95□□□□□ -0.5
TRIM39-206ENST00000420746 KIF22Q14807 665 aa11.94□□□□□ -0.5
TRIM39-206ENST00000420746 MIS18AQ9NYP9 233 aa11.94□□□□□ -0.5
TRIM39-206ENST00000420746 SSC5DA1L4H1 1573 aa11.93□□□□□ -0.5
TRIM39-206ENST00000420746 EVI5O60447 810 aa11.93□□□□□ -0.5
TRIM39-206ENST00000420746 GJA5P36382 358 aa11.93□□□□□ -0.5
TRIM39-206ENST00000420746 PDIA6Q15084 440 aa11.93□□□□□ -0.5
TRIM39-206ENST00000420746 DACT2Q5SW24 774 aa11.93□□□□□ -0.5
TRIM39-206ENST00000420746 PPP4R3CPQ6ZMV5 832 aa11.93□□□□□ -0.5
TRIM39-206ENST00000420746 ZBED3Q96IU2 234 aaPredicted RBP11.93□□□□□ -0.5
TRIM39-206ENST00000420746 MS4A4AQ96JQ5 239 aa11.93□□□□□ -0.5
TRIM39-206ENST00000420746 GDF15Q99988 308 aa11.93□□□□□ -0.5
TRIM39-206ENST00000420746 DEFB129Q9H1M3 183 aa11.93□□□□□ -0.5
TRIM39-206ENST00000420746 ANKIB1Q9P2G1 1089 aa11.93□□□□□ -0.5
TRIM39-206ENST00000420746 STAP2Q9UGK3 403 aa11.93□□□□□ -0.5
TRIM39-206ENST00000420746 TIMELESSQ9UNS1 1208 aa11.93□□□□□ -0.5
TRIM39-206ENST00000420746 COL4A1P02462 1669 aa11.92□□□□□ -0.5
TRIM39-206ENST00000420746 SASH1O94885 1247 aa11.92□□□□□ -0.5
TRIM39-206ENST00000420746 FARP2O94887 1054 aaPredicted RBP11.92□□□□□ -0.5
TRIM39-206ENST00000420746 IREB2P48200 963 aaKnown RBP11.92□□□□□ -0.5
TRIM39-206ENST00000420746 EIF4G2P78344 907 aaKnown RBP eCLIP11.92□□□□□ -0.5
TRIM39-206ENST00000420746 LACTBP83111 547 aaPredicted RBP11.92□□□□□ -0.5
TRIM39-206ENST00000420746 MTFR1Q15390 333 aa11.92□□□□□ -0.5
TRIM39-206ENST00000420746 TAF1CQ15572 869 aaPredicted RBP11.92□□□□□ -0.5
TRIM39-206ENST00000420746 SUPT20HL1Q3ZLR7 823 aa11.92□□□□□ -0.5
TRIM39-206ENST00000420746 Q7L0L9 218 aa11.92□□□□□ -0.5
TRIM39-206ENST00000420746 ANKRD13AQ8IZ07 590 aa11.92□□□□□ -0.5
TRIM39-206ENST00000420746 ZCCHC17Q9NP64 241 aaKnown RBP11.92□□□□□ -0.5
TRIM39-206ENST00000420746 WDHD1O75717 1129 aaPredicted RBP11.91□□□□□ -0.5
TRIM39-206ENST00000420746 STRIP1Q5VSL9 837 aa11.91□□□□□ -0.5
TRIM39-206ENST00000420746 THUMPD2Q9BTF0 503 aaKnown RBP11.91□□□□□ -0.5
TRIM39-206ENST00000420746 FZD1Q9UP38 647 aa11.91□□□□□ -0.5
TRIM39-206ENST00000420746 XDHP47989 1333 aa11.9□□□□□ -0.5
TRIM39-206ENST00000420746 RPTORQ8N122 1335 aa11.9□□□□□ -0.5
TRIM39-206ENST00000420746 TLR2O60603 784 aa11.9□□□□□ -0.5
TRIM39-206ENST00000420746 ATP2B4P23634 1241 aa11.9□□□□□ -0.5
TRIM39-206ENST00000420746 NUDCQ9Y266 331 aa11.9□□□□□ -0.5
TRIM39-206ENST00000420746 MED23Q9ULK4 1368 aa11.9□□□□□ -0.5
TRIM39-206ENST00000420746 ZNF804BA4D1E1 1349 aa11.89□□□□□ -0.51
TRIM39-206ENST00000420746 PER1O15534 1290 aaPredicted RBP11.89□□□□□ -0.51
TRIM39-206ENST00000420746 CCL5P13501 91 aa11.89□□□□□ -0.51
TRIM39-206ENST00000420746 COL9A1P20849 921 aa11.89□□□□□ -0.51
TRIM39-206ENST00000420746 GTF2A2P52657 109 aa11.89□□□□□ -0.51
TRIM39-206ENST00000420746 PROSER3Q2NL68 480 aa11.89□□□□□ -0.51
TRIM39-206ENST00000420746 COPS6Q7L5N1 327 aa11.89□□□□□ -0.51
TRIM39-206ENST00000420746 HELBQ8NG08 1087 aaPredicted RBP11.89□□□□□ -0.51
TRIM39-206ENST00000420746 BRI3BPQ8WY22 251 aa11.89□□□□□ -0.51
TRIM39-206ENST00000420746 CFAP53Q96M91 514 aa11.89□□□□□ -0.51
TRIM39-206ENST00000420746 ARHGAP39Q9C0H5 1083 aa11.89□□□□□ -0.51
TRIM39-206ENST00000420746 HSPA5P11021 654 aaKnown RBP11.88□□□□□ -0.51
TRIM39-206ENST00000420746 HSP90B1P14625 803 aaKnown RBP11.88□□□□□ -0.51
TRIM39-206ENST00000420746 HOXD10P28358 340 aa11.88□□□□□ -0.51
TRIM39-206ENST00000420746 GRK4P32298 578 aa11.88□□□□□ -0.51
TRIM39-206ENST00000420746 UBXN2AP68543 259 aa11.88□□□□□ -0.51
TRIM39-206ENST00000420746 CC2D1BQ5T0F9 858 aaKnown RBP11.88□□□□□ -0.51
TRIM39-206ENST00000420746 FAM109BQ6ICB4 259 aaPredicted RBP11.88□□□□□ -0.51
TRIM39-206ENST00000420746 TDHQ8IZJ6 230 aa11.88□□□□□ -0.51
TRIM39-206ENST00000420746 MTMR14Q8NCE2 650 aa11.88□□□□□ -0.51
TRIM39-206ENST00000420746 U2AF1L4Q8WU68 220 aaKnown RBP11.88□□□□□ -0.51
TRIM39-206ENST00000420746 OPTNQ96CV9 577 aa11.88□□□□□ -0.51
TRIM39-206ENST00000420746 FAM89AQ96GI7 184 aa11.88□□□□□ -0.51
TRIM39-206ENST00000420746 ISCA1Q9BUE6 129 aa11.88□□□□□ -0.51
TRIM39-206ENST00000420746 RNF208Q9H0X6 261 aa11.88□□□□□ -0.51
TRIM39-206ENST00000420746 SRRDQ9UH36 339 aa11.88□□□□□ -0.51
TRIM39-206ENST00000420746 RIPOR2Q9Y4F9 1068 aa11.88□□□□□ -0.51
TRIM39-206ENST00000420746 MUC3AQ02505 3323 aa11.87□□□□□ -0.51
TRIM39-206ENST00000420746 CCL15-CCL14A0A0B4J2E2 113 aa11.87□□□□□ -0.51
TRIM39-206ENST00000420746 USP2O75604 605 aaPredicted RBP11.87□□□□□ -0.51
TRIM39-206ENST00000420746 PLA2G5P39877 138 aa11.87□□□□□ -0.51
TRIM39-206ENST00000420746 BCAMP50895 628 aa11.87□□□□□ -0.51
TRIM39-206ENST00000420746 CCL15Q16663 113 aa11.87□□□□□ -0.51
TRIM39-206ENST00000420746 FAM43AQ8N2R8 423 aa11.87□□□□□ -0.51
TRIM39-206ENST00000420746 XAGE3Q8WTP9 111 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms