RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 DENND2AQ9ULE3 1009 aa10.49□□□□□ -0.73
SNCA-206ENST00000420646 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.49□□□□□ -0.73
SNCA-206ENST00000420646 AHDC1Q5TGY3 1603 aaPredicted RBP10.49□□□□□ -0.73
SNCA-206ENST00000420646 WDR33Q9C0J8 1336 aaKnown RBP10.49□□□□□ -0.73
SNCA-206ENST00000420646 FOXP2O15409 715 aa10.49□□□□□ -0.73
SNCA-206ENST00000420646 PDE8AO60658 829 aa10.49□□□□□ -0.73
SNCA-206ENST00000420646 CAMTA2O94983 1202 aa10.49□□□□□ -0.73
SNCA-206ENST00000420646 ZSCAN22P10073 491 aaPredicted RBP10.49□□□□□ -0.73
SNCA-206ENST00000420646 FGD1P98174 961 aa10.49□□□□□ -0.73
SNCA-206ENST00000420646 L1TD1Q5T7N2 865 aaKnown RBP10.49□□□□□ -0.73
SNCA-206ENST00000420646 C3orf67Q6ZVT6 689 aa10.49□□□□□ -0.73
SNCA-206ENST00000420646 RIC1Q4ADV7 1423 aa10.48□□□□□ -0.73
SNCA-206ENST00000420646 DOT1LQ8TEK3 1739 aa10.48□□□□□ -0.73
SNCA-206ENST00000420646 IDH1O75874 414 aaKnown RBP10.48□□□□□ -0.73
SNCA-206ENST00000420646 HSP90B1P14625 803 aaKnown RBP10.48□□□□□ -0.73
SNCA-206ENST00000420646 DNM1Q05193 864 aaKnown RBP10.48□□□□□ -0.73
SNCA-206ENST00000420646 AMIGO3Q86WK7 504 aa10.48□□□□□ -0.73
SNCA-206ENST00000420646 LINC00116Q8NCU8 138 aa10.48□□□□□ -0.73
SNCA-206ENST00000420646 NKX2-3Q8TAU0 364 aa10.48□□□□□ -0.73
SNCA-206ENST00000420646 UBE2Q2Q8WVN8 375 aa10.48□□□□□ -0.73
SNCA-206ENST00000420646 AKAP2Q9Y2D5 859 aa10.48□□□□□ -0.73
SNCA-206ENST00000420646 PHLPP1O60346 1717 aa10.48□□□□□ -0.73
SNCA-206ENST00000420646 PDE8BO95263 885 aa10.48□□□□□ -0.73
SNCA-206ENST00000420646 CDC37L1Q7L3B6 337 aa10.48□□□□□ -0.73
SNCA-206ENST00000420646 VGLL2Q8N8G2 317 aa10.48□□□□□ -0.73
SNCA-206ENST00000420646 NCOA5Q9HCD5 579 aaKnown RBP10.48□□□□□ -0.73
SNCA-206ENST00000420646 MTMR6Q9Y217 621 aa10.48□□□□□ -0.73
SNCA-206ENST00000420646 TCHHQ07283 1943 aa10.47□□□□□ -0.73
SNCA-206ENST00000420646 ERVV-1B6SEH8 477 aa10.47□□□□□ -0.73
SNCA-206ENST00000420646 CCT2P78371 535 aaKnown RBP10.47□□□□□ -0.73
SNCA-206ENST00000420646 APOBRQ0VD83 1088 aa10.47□□□□□ -0.73
SNCA-206ENST00000420646 LARP1BQ659C4 914 aaKnown RBP10.47□□□□□ -0.73
SNCA-206ENST00000420646 PIH1D3Q9NQM4 214 aaKnown RBP10.47□□□□□ -0.73
SNCA-206ENST00000420646 THRAP3Q9Y2W1 955 aaKnown RBP10.47□□□□□ -0.73
SNCA-206ENST00000420646 SH3TC1Q8TE82 1336 aa10.47□□□□□ -0.73
SNCA-206ENST00000420646 CDHR2Q9BYE9 1310 aa10.47□□□□□ -0.73
SNCA-206ENST00000420646 MRE11P49959 708 aa10.47□□□□□ -0.73
SNCA-206ENST00000420646 CCDC102BQ68D86 513 aa10.47□□□□□ -0.73
SNCA-206ENST00000420646 SLC51AQ86UW1 340 aa10.47□□□□□ -0.73
SNCA-206ENST00000420646 INCENPQ9NQS7 918 aa10.47□□□□□ -0.73
SNCA-206ENST00000420646 U3KPZ7 1027 aaPredicted RBP10.47□□□□□ -0.73
SNCA-206ENST00000420646 LRP6O75581 1613 aa10.47□□□□□ -0.73
SNCA-206ENST00000420646 MYH14Q7Z406 1995 aaKnown RBP10.47□□□□□ -0.73
SNCA-206ENST00000420646 PLCH1Q4KWH8 1693 aa10.47□□□□□ -0.73
SNCA-206ENST00000420646 F13A1P00488 732 aa10.47□□□□□ -0.73
SNCA-206ENST00000420646 SLC9C2Q5TAH2 1124 aa10.47□□□□□ -0.73
SNCA-206ENST00000420646 STK11IPQ8N1F8 1099 aa10.47□□□□□ -0.73
SNCA-206ENST00000420646 RNF214Q8ND24 703 aa10.47□□□□□ -0.73
SNCA-206ENST00000420646 UTP14AQ9BVJ6 771 aaKnown RBP10.47□□□□□ -0.73
SNCA-206ENST00000420646 SRP68Q9UHB9 627 aaKnown RBP10.47□□□□□ -0.73
SNCA-206ENST00000420646 E7EWF7 191 aa10.46□□□□□ -0.73
SNCA-206ENST00000420646 FGAP02671 866 aa10.46□□□□□ -0.73
SNCA-206ENST00000420646 MPHOSPH8Q99549 860 aa10.46□□□□□ -0.73
SNCA-206ENST00000420646 CDCA7Q9BWT1 371 aaPredicted RBP10.46□□□□□ -0.73
SNCA-206ENST00000420646 HELLSQ9NRZ9 838 aa10.46□□□□□ -0.73
SNCA-206ENST00000420646 WWC3Q9ULE0 1092 aa10.46□□□□□ -0.73
SNCA-206ENST00000420646 JCADQ9P266 1359 aa10.46□□□□□ -0.73
SNCA-206ENST00000420646 BCAMP50895 628 aa10.46□□□□□ -0.74
SNCA-206ENST00000420646 ZSCAN31Q96LW9 406 aaPredicted RBP10.46□□□□□ -0.74
SNCA-206ENST00000420646 RBSNQ9H1K0 784 aa10.46□□□□□ -0.74
SNCA-206ENST00000420646 SH2B1Q9NRF2 756 aaPredicted RBP10.46□□□□□ -0.74
SNCA-206ENST00000420646 HMG20BQ9P0W2 317 aa10.46□□□□□ -0.74
SNCA-206ENST00000420646 TSGA10IPQ3SY00 556 aa10.45□□□□□ -0.74
SNCA-206ENST00000420646 ERFEQ4G0M1 354 aa10.45□□□□□ -0.74
SNCA-206ENST00000420646 TFIP11Q9UBB9 837 aaKnown RBP10.45□□□□□ -0.74
SNCA-206ENST00000420646 NUP98P52948 1817 aa10.45□□□□□ -0.74
SNCA-206ENST00000420646 GPAA1O43292 621 aa10.45□□□□□ -0.74
SNCA-206ENST00000420646 SCRN1Q12765 414 aa10.45□□□□□ -0.74
SNCA-206ENST00000420646 BARGINQ6ZT62 677 aa10.45□□□□□ -0.74
SNCA-206ENST00000420646 COL22A1Q8NFW1 1626 aaPredicted RBP10.45□□□□□ -0.74
SNCA-206ENST00000420646 NTSR2O95665 410 aa10.44□□□□□ -0.74
SNCA-206ENST00000420646 APPP05067 770 aa10.44□□□□□ -0.74
SNCA-206ENST00000420646 BCL9LQ86UU0 1499 aa10.44□□□□□ -0.74
SNCA-206ENST00000420646 KDM4AO75164 1064 aa10.44□□□□□ -0.74
SNCA-206ENST00000420646 USP21Q9UK80 565 aa10.44□□□□□ -0.74
SNCA-206ENST00000420646 COL4A1P02462 1669 aa10.44□□□□□ -0.74
SNCA-206ENST00000420646 PTMSP20962 102 aa10.44□□□□□ -0.74
SNCA-206ENST00000420646 GUCY1B3Q02153 619 aa10.44□□□□□ -0.74
SNCA-206ENST00000420646 RASGRF1Q13972 1273 aa10.44□□□□□ -0.74
SNCA-206ENST00000420646 DHX32Q7L7V1 743 aaKnown RBP10.44□□□□□ -0.74
SNCA-206ENST00000420646 DSCC1Q9BVC3 393 aa10.44□□□□□ -0.74
SNCA-206ENST00000420646 PHF14O94880 888 aa10.43□□□□□ -0.74
SNCA-206ENST00000420646 KRT32Q14532 448 aa10.43□□□□□ -0.74
SNCA-206ENST00000420646 TBC1D9BQ66K14 1250 aa10.43□□□□□ -0.74
SNCA-206ENST00000420646 ZNF532Q9HCE3 1301 aa10.43□□□□□ -0.74
SNCA-206ENST00000420646 GTF2E1P29083 439 aaPredicted RBP10.43□□□□□ -0.74
SNCA-206ENST00000420646 NASPP49321 788 aaPredicted RBP10.43□□□□□ -0.74
SNCA-206ENST00000420646 CEBPZQ03701 1054 aaKnown RBP10.43□□□□□ -0.74
SNCA-206ENST00000420646 GTF3C6Q969F1 213 aa10.43□□□□□ -0.74
SNCA-206ENST00000420646 ANKRD1Q15327 319 aa10.42□□□□□ -0.74
SNCA-206ENST00000420646 PUM3Q15397 648 aaKnown RBP10.42□□□□□ -0.74
SNCA-206ENST00000420646 APPBP2Q92624 585 aa10.42□□□□□ -0.74
SNCA-206ENST00000420646 GJB4Q9NTQ9 266 aa10.42□□□□□ -0.74
SNCA-206ENST00000420646 FBXO3Q9UK99 471 aa10.42□□□□□ -0.74
SNCA-206ENST00000420646 GNPATO15228 680 aa10.42□□□□□ -0.74
SNCA-206ENST00000420646 CTDNEP1O95476 244 aa10.42□□□□□ -0.74
SNCA-206ENST00000420646 RXRAP19793 462 aa10.42□□□□□ -0.74
SNCA-206ENST00000420646 GYG1P46976 350 aa10.42□□□□□ -0.74
SNCA-206ENST00000420646 EXOSC10Q01780 885 aaKnown RBP10.42□□□□□ -0.74
SNCA-206ENST00000420646 CHRNDQ07001 517 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms