RNA–Protein interactions for RNA: ENST00000420115.6

CDV3-202, Transcript of CDV3 homolog, humanhuman

TSL 2 BASIC

Gene CDV3, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDV3-202ENST00000420115 AMPHP49418 695 aa11.73□□□□□ -0.53
CDV3-202ENST00000420115 DHX8Q14562 1220 aaKnown RBP11.73□□□□□ -0.53
CDV3-202ENST00000420115 PI4KAP1Q8N8J0 262 aa11.73□□□□□ -0.53
CDV3-202ENST00000420115 BORCS6Q96GS4 357 aa11.73□□□□□ -0.53
CDV3-202ENST00000420115 H3BQV1 296 aa11.73□□□□□ -0.53
CDV3-202ENST00000420115 SNW1Q13573 536 aaKnown RBP11.73□□□□□ -0.53
CDV3-202ENST00000420115 IFFO2Q5TF58 517 aa11.73□□□□□ -0.53
CDV3-202ENST00000420115 NAIF1Q69YI7 327 aaPredicted RBP11.73□□□□□ -0.53
CDV3-202ENST00000420115 AACSQ86V21 672 aa11.73□□□□□ -0.53
CDV3-202ENST00000420115 HMG20BQ9P0W2 317 aa11.73□□□□□ -0.53
CDV3-202ENST00000420115 A0A0D9SFI3 127 aa11.73□□□□□ -0.53
CDV3-202ENST00000420115 EIF2S2P20042 333 aaKnown RBP11.73□□□□□ -0.53
CDV3-202ENST00000420115 DDX11Q96FC9 970 aa11.73□□□□□ -0.53
CDV3-202ENST00000420115 SRRTQ9BXP5 876 aaKnown RBP11.73□□□□□ -0.53
CDV3-202ENST00000420115 ANO10Q9NW15 660 aa11.73□□□□□ -0.53
CDV3-202ENST00000420115 CCAR1Q8IX12 1150 aaKnown RBP11.72□□□□□ -0.53
CDV3-202ENST00000420115 OSBPL5Q9H0X9 879 aaPredicted RBP11.72□□□□□ -0.53
CDV3-202ENST00000420115 FHOD1Q9Y613 1164 aa11.72□□□□□ -0.53
CDV3-202ENST00000420115 NUTM2FA1L443 756 aa11.72□□□□□ -0.53
CDV3-202ENST00000420115 ROBO2Q9HCK4 1378 aa11.72□□□□□ -0.53
CDV3-202ENST00000420115 PNMA6AP0CW24 399 aaPredicted RBP11.72□□□□□ -0.53
CDV3-202ENST00000420115 MNAT1P51948 309 aa11.72□□□□□ -0.53
CDV3-202ENST00000420115 CEBPZQ03701 1054 aaKnown RBP11.72□□□□□ -0.53
CDV3-202ENST00000420115 CHPF2Q9P2E5 772 aa11.72□□□□□ -0.53
CDV3-202ENST00000420115 IMPACTQ9P2X3 320 aa11.72□□□□□ -0.53
CDV3-202ENST00000420115 PA2G4Q9UQ80 394 aaKnown RBP11.72□□□□□ -0.53
CDV3-202ENST00000420115 MED23Q9ULK4 1368 aa11.72□□□□□ -0.53
CDV3-202ENST00000420115 CCDC93Q567U6 631 aa11.71□□□□□ -0.53
CDV3-202ENST00000420115 E4F1Q66K89 784 aaPredicted RBP11.71□□□□□ -0.53
CDV3-202ENST00000420115 CEP57L1Q8IYX8 460 aa11.71□□□□□ -0.53
CDV3-202ENST00000420115 GOLPH3LQ9H4A5 285 aa11.71□□□□□ -0.53
CDV3-202ENST00000420115 RCOR1Q9UKL0 485 aa11.71□□□□□ -0.53
CDV3-202ENST00000420115 KINO60870 393 aaKnown RBP11.71□□□□□ -0.54
CDV3-202ENST00000420115 NEBLO76041 1014 aa11.71□□□□□ -0.54
CDV3-202ENST00000420115 CLCN6P51797 869 aa11.71□□□□□ -0.54
CDV3-202ENST00000420115 CCDC73Q6ZRK6 1079 aa11.71□□□□□ -0.54
CDV3-202ENST00000420115 NBPF11Q86T75 865 aa11.71□□□□□ -0.54
CDV3-202ENST00000420115 ADD1P35611 737 aaKnown RBP11.71□□□□□ -0.54
CDV3-202ENST00000420115 AOPEPQ8N6M6 819 aa11.71□□□□□ -0.54
CDV3-202ENST00000420115 PPP1R13BQ96KQ4 1090 aa11.71□□□□□ -0.54
CDV3-202ENST00000420115 FSD1Q9BTV5 496 aa11.71□□□□□ -0.54
CDV3-202ENST00000420115 NAT10Q9H0A0 1025 aaKnown RBP11.71□□□□□ -0.54
CDV3-202ENST00000420115 EPC1Q9H2F5 836 aa11.71□□□□□ -0.54
CDV3-202ENST00000420115 JCADQ9P266 1359 aa11.71□□□□□ -0.54
CDV3-202ENST00000420115 OAS2P29728 719 aaKnown RBP11.7□□□□□ -0.54
CDV3-202ENST00000420115 CWC15Q9P013 229 aaKnown RBP11.7□□□□□ -0.54
CDV3-202ENST00000420115 A0A087WWV3 80 aa11.7□□□□□ -0.54
CDV3-202ENST00000420115 PSDA5PKW4 1024 aaPredicted RBP11.7□□□□□ -0.54
CDV3-202ENST00000420115 KRT32Q14532 448 aa11.7□□□□□ -0.54
CDV3-202ENST00000420115 MUM1L1Q5H9M0 696 aa11.7□□□□□ -0.54
CDV3-202ENST00000420115 EIF3CLB5ME19 914 aaKnown RBP11.69□□□□□ -0.54
CDV3-202ENST00000420115 TUBB4AP04350 444 aa11.69□□□□□ -0.54
CDV3-202ENST00000420115 FAM160A1Q05DH4 1040 aa11.69□□□□□ -0.54
CDV3-202ENST00000420115 ZNF589Q86UQ0 364 aaPredicted RBP11.69□□□□□ -0.54
CDV3-202ENST00000420115 ENGASEQ8NFI3 743 aa11.69□□□□□ -0.54
CDV3-202ENST00000420115 EIF3CQ99613 913 aaKnown RBP11.69□□□□□ -0.54
CDV3-202ENST00000420115 HOXB7P09629 217 aa11.69□□□□□ -0.54
CDV3-202ENST00000420115 ARHGAP29Q52LW3 1261 aa11.69□□□□□ -0.54
CDV3-202ENST00000420115 NOM1Q5C9Z4 860 aaKnown RBP11.69□□□□□ -0.54
CDV3-202ENST00000420115 MCTP2Q6DN12 878 aa11.69□□□□□ -0.54
CDV3-202ENST00000420115 CEP120Q8N960 986 aa11.69□□□□□ -0.54
CDV3-202ENST00000420115 CCDC150Q8NCX0 1101 aa11.69□□□□□ -0.54
CDV3-202ENST00000420115 EAF2Q96CJ1 260 aaPredicted RBP11.69□□□□□ -0.54
CDV3-202ENST00000420115 MED4Q9NPJ6 270 aa11.69□□□□□ -0.54
CDV3-202ENST00000420115 C9orf78Q9NZ63 289 aaPredicted RBP11.69□□□□□ -0.54
CDV3-202ENST00000420115 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.69□□□□□ -0.548e-7■□□□□ 9.8
CDV3-202ENST00000420115 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.69□□□□□ -0.54
CDV3-202ENST00000420115 H0YHG0 523 aa11.69□□□□□ -0.54
CDV3-202ENST00000420115 KCNJ6P48051 423 aa11.69□□□□□ -0.54
CDV3-202ENST00000420115 EIF4A1P60842 406 aaKnown RBP11.69□□□□□ -0.54
CDV3-202ENST00000420115 SARNPP82979 210 aaKnown RBP11.69□□□□□ -0.54
CDV3-202ENST00000420115 NUTM2GQ5VZR2 741 aa11.69□□□□□ -0.54
CDV3-202ENST00000420115 FTOQ9C0B1 505 aaKnown RBP eCLIP11.69□□□□□ -0.54
CDV3-202ENST00000420115 MYH15Q9Y2K3 1946 aa11.69□□□□□ -0.54
CDV3-202ENST00000420115 TAF5LO75529 589 aa11.68□□□□□ -0.54
CDV3-202ENST00000420115 MAP9Q49MG5 647 aa11.68□□□□□ -0.54
CDV3-202ENST00000420115 USPL1Q5W0Q7 1092 aa11.68□□□□□ -0.54
CDV3-202ENST00000420115 NAA16Q6N069 864 aaPredicted RBP11.68□□□□□ -0.54
CDV3-202ENST00000420115 NEK1Q96PY6 1258 aa11.68□□□□□ -0.54
CDV3-202ENST00000420115 CAND2O75155 1236 aa11.68□□□□□ -0.54
CDV3-202ENST00000420115 SASH1O94885 1247 aa11.68□□□□□ -0.54
CDV3-202ENST00000420115 ARMCX5Q6P1M9 558 aa11.68□□□□□ -0.54
CDV3-202ENST00000420115 Q6ZUG5 572 aa11.68□□□□□ -0.54
CDV3-202ENST00000420115 SMARCC2Q8TAQ2 1214 aa11.68□□□□□ -0.54
CDV3-202ENST00000420115 CCDC8Q9H0W5 538 aaPredicted RBP11.68□□□□□ -0.54
CDV3-202ENST00000420115 BOLA2Q9H3K6 86 aa11.68□□□□□ -0.54
CDV3-202ENST00000420115 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.68□□□□□ -0.54
CDV3-202ENST00000420115 PTPRUQ92729 1446 aa11.68□□□□□ -0.54
CDV3-202ENST00000420115 ZRANB2O95218 330 aaKnown RBP eCLIP11.68□□□□□ -0.54
CDV3-202ENST00000420115 PLEKHO1Q53GL0 409 aaPredicted RBP11.68□□□□□ -0.54
CDV3-202ENST00000420115 IRAK4Q9NWZ3 460 aa11.68□□□□□ -0.54
CDV3-202ENST00000420115 RAI14Q9P0K7 980 aa11.68□□□□□ -0.54
CDV3-202ENST00000420115 NWD1Q149M9 1564 aa11.68□□□□□ -0.54
CDV3-202ENST00000420115 FRMD3A2A2Y4 597 aa11.67□□□□□ -0.54
CDV3-202ENST00000420115 ANXA1P04083 346 aa11.67□□□□□ -0.54
CDV3-202ENST00000420115 SFPQP23246 707 aaKnown RBP eCLIP11.67□□□□□ -0.54
CDV3-202ENST00000420115 GPS2Q13227 327 aa11.67□□□□□ -0.54
CDV3-202ENST00000420115 ATL3Q6DD88 541 aa11.67□□□□□ -0.54
CDV3-202ENST00000420115 MICALL1Q8N3F8 863 aa11.67□□□□□ -0.54
CDV3-202ENST00000420115 USP28Q96RU2 1077 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms