RNA–Protein interactions for RNA: ENST00000419499.1

LINC00402-201, long intergenic non-protein coding RNA 402, humanhuman

TSL 2 BASIC

Gene LINC00402, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00402-201ENST00000419499 FBXL16Q8N461 479 aa11.69□□□□□ -0.54
LINC00402-201ENST00000419499 UTP14AQ9BVJ6 771 aaKnown RBP11.69□□□□□ -0.54
LINC00402-201ENST00000419499 BCL2L12Q9HB09 334 aa11.69□□□□□ -0.54
LINC00402-201ENST00000419499 COL1A1P02452 1464 aaPredicted RBP11.68□□□□□ -0.54
LINC00402-201ENST00000419499 ONECUT3O60422 494 aaPredicted RBP11.68□□□□□ -0.54
LINC00402-201ENST00000419499 METTL24Q5JXM2 366 aa11.68□□□□□ -0.54
LINC00402-201ENST00000419499 CCDC158Q5M9N0 1113 aa11.68□□□□□ -0.54
LINC00402-201ENST00000419499 PI16Q6UXB8 463 aa11.68□□□□□ -0.54
LINC00402-201ENST00000419499 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.68□□□□□ -0.54
LINC00402-201ENST00000419499 WDR33Q9C0J8 1336 aaKnown RBP11.68□□□□□ -0.54
LINC00402-201ENST00000419499 ZAP70P43403 619 aa11.68□□□□□ -0.54
LINC00402-201ENST00000419499 TTC39AQ5SRH9 613 aa11.68□□□□□ -0.54
LINC00402-201ENST00000419499 LARP6Q9BRS8 491 aaKnown RBP11.68□□□□□ -0.54
LINC00402-201ENST00000419499 LAMB1P07942 1786 aa11.68□□□□□ -0.54
LINC00402-201ENST00000419499 LRRC37AA6NMS7 1700 aa11.68□□□□□ -0.54
LINC00402-201ENST00000419499 A0A0G2JLW4 131 aa11.68□□□□□ -0.54
LINC00402-201ENST00000419499 TCRBV5S4A2TA0A5A2 114 aa11.68□□□□□ -0.54
LINC00402-201ENST00000419499 ZFYP08048 801 aaPredicted RBP11.68□□□□□ -0.54
LINC00402-201ENST00000419499 PUM3Q15397 648 aaKnown RBP11.68□□□□□ -0.54
LINC00402-201ENST00000419499 RC3H1Q5TC82 1133 aaKnown RBP11.68□□□□□ -0.54
LINC00402-201ENST00000419499 BLOC1S2Q6QNY1 142 aa11.68□□□□□ -0.54
LINC00402-201ENST00000419499 SYT1P21579 422 aa11.67□□□□□ -0.54
LINC00402-201ENST00000419499 ANKRD1Q15327 319 aa11.67□□□□□ -0.54
LINC00402-201ENST00000419499 LTBP1Q14766 1721 aa11.67□□□□□ -0.54
LINC00402-201ENST00000419499 DLEC1Q9Y238 1755 aa11.67□□□□□ -0.54
LINC00402-201ENST00000419499 GOLGA6L22H0YM25 854 aa11.67□□□□□ -0.54
LINC00402-201ENST00000419499 EXOSC10Q01780 885 aaKnown RBP11.67□□□□□ -0.54
LINC00402-201ENST00000419499 GAS2L3Q86XJ1 694 aa11.67□□□□□ -0.54
LINC00402-201ENST00000419499 LPIN2Q92539 896 aa11.67□□□□□ -0.54
LINC00402-201ENST00000419499 ZSCAN22P10073 491 aaPredicted RBP11.66□□□□□ -0.54
LINC00402-201ENST00000419499 HCLS1P14317 486 aaPredicted RBP11.66□□□□□ -0.54
LINC00402-201ENST00000419499 TAF7LQ5H9L4 462 aa11.66□□□□□ -0.54
LINC00402-201ENST00000419499 CCDC83Q8IWF9 413 aa11.66□□□□□ -0.54
LINC00402-201ENST00000419499 CCDC9Q9Y3X0 531 aaKnown RBP11.66□□□□□ -0.54
LINC00402-201ENST00000419499 CCDC102BQ68D86 513 aa11.66□□□□□ -0.54
LINC00402-201ENST00000419499 AMIGO3Q86WK7 504 aa11.66□□□□□ -0.54
LINC00402-201ENST00000419499 APPBP2Q92624 585 aa11.66□□□□□ -0.54
LINC00402-201ENST00000419499 NGLY1Q96IV0 654 aa11.66□□□□□ -0.54
LINC00402-201ENST00000419499 NEK1Q96PY6 1258 aa11.66□□□□□ -0.54
LINC00402-201ENST00000419499 SEC31BQ9NQW1 1179 aa11.66□□□□□ -0.54
LINC00402-201ENST00000419499 MTMR6Q9Y217 621 aa11.66□□□□□ -0.54
LINC00402-201ENST00000419499 STX6O43752 255 aa11.66□□□□□ -0.54
LINC00402-201ENST00000419499 GJB2P29033 226 aa11.66□□□□□ -0.54
LINC00402-201ENST00000419499 ADD2P35612 726 aa11.66□□□□□ -0.54
LINC00402-201ENST00000419499 ZNF445P59923 1031 aa11.66□□□□□ -0.54
LINC00402-201ENST00000419499 PUS7LQ9H0K6 701 aaKnown RBP11.66□□□□□ -0.54
LINC00402-201ENST00000419499 GZF1Q9H116 711 aaPredicted RBP11.66□□□□□ -0.54
LINC00402-201ENST00000419499 USP21Q9UK80 565 aa11.66□□□□□ -0.54
LINC00402-201ENST00000419499 NIP7Q9Y221 180 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC00402-201ENST00000419499 ZNF804BA4D1E1 1349 aa11.66□□□□□ -0.54
LINC00402-201ENST00000419499 ZMYM6O95789 1325 aa11.66□□□□□ -0.54
LINC00402-201ENST00000419499 SALL1Q9NSC2 1324 aa11.66□□□□□ -0.54
LINC00402-201ENST00000419499 XRCC6P12956 609 aaKnown RBP eCLIP11.65□□□□□ -0.54
LINC00402-201ENST00000419499 PHKA1P46020 1223 aa11.65□□□□□ -0.54
LINC00402-201ENST00000419499 KCNJ4P48050 445 aa11.65□□□□□ -0.54
LINC00402-201ENST00000419499 C3orf67Q6ZVT6 689 aa11.65□□□□□ -0.54
LINC00402-201ENST00000419499 GTF3C6Q969F1 213 aa11.65□□□□□ -0.54
LINC00402-201ENST00000419499 CNNM1Q9NRU3 951 aa11.65□□□□□ -0.54
LINC00402-201ENST00000419499 NSFL1CQ9UNZ2 370 aaKnown RBP11.65□□□□□ -0.54
LINC00402-201ENST00000419499 EVCP57679 992 aa11.65□□□□□ -0.54
LINC00402-201ENST00000419499 TCEANC2Q96MN5 208 aa11.65□□□□□ -0.54
LINC00402-201ENST00000419499 NBPF3Q9H094 633 aa11.65□□□□□ -0.54
LINC00402-201ENST00000419499 PIH1D3Q9NQM4 214 aaKnown RBP11.65□□□□□ -0.54
LINC00402-201ENST00000419499 ZNF652Q9Y2D9 606 aa11.65□□□□□ -0.54
LINC00402-201ENST00000419499 NRXN2Q9P2S2 1712 aa11.65□□□□□ -0.54
LINC00402-201ENST00000419499 F13A1P00488 732 aa11.65□□□□□ -0.55
LINC00402-201ENST00000419499 SF3B3Q15393 1217 aaKnown RBP11.65□□□□□ -0.55
LINC00402-201ENST00000419499 CCDC152Q4G0S7 254 aa11.65□□□□□ -0.55
LINC00402-201ENST00000419499 L1TD1Q5T7N2 865 aaKnown RBP11.65□□□□□ -0.55
LINC00402-201ENST00000419499 E7EWF7 191 aa11.64□□□□□ -0.55
LINC00402-201ENST00000419499 FKBP4Q02790 459 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC00402-201ENST00000419499 SLC10A5Q5PT55 438 aa11.64□□□□□ -0.55
LINC00402-201ENST00000419499 ARXQ96QS3 562 aa11.64□□□□□ -0.55
LINC00402-201ENST00000419499 GOLGA6L3A6NEY3 463 aa11.64□□□□□ -0.55
LINC00402-201ENST00000419499 HMGB1P09429 215 aaKnown RBP11.64□□□□□ -0.55
LINC00402-201ENST00000419499 NECAB1Q8N987 351 aa11.64□□□□□ -0.55
LINC00402-201ENST00000419499 SMC3Q9UQE7 1217 aa11.64□□□□□ -0.55
LINC00402-201ENST00000419499 ZBTB22O15209 634 aa11.63□□□□□ -0.55
LINC00402-201ENST00000419499 UBE3CQ15386 1083 aa11.63□□□□□ -0.55
LINC00402-201ENST00000419499 DDX49Q9Y6V7 483 aaKnown RBP11.63□□□□□ -0.55
LINC00402-201ENST00000419499 RGPD3A6NKT7 1758 aaPredicted RBP11.63□□□□□ -0.55
LINC00402-201ENST00000419499 RGPD4Q7Z3J3 1758 aa11.63□□□□□ -0.55
LINC00402-201ENST00000419499 RPS6KA4O75676 772 aa11.63□□□□□ -0.55
LINC00402-201ENST00000419499 RASGRF1Q13972 1273 aa11.63□□□□□ -0.55
LINC00402-201ENST00000419499 TTF1Q15361 905 aaPredicted RBP11.63□□□□□ -0.55
LINC00402-201ENST00000419499 LRRFIP1Q32MZ4 808 aaKnown RBP11.63□□□□□ -0.55
LINC00402-201ENST00000419499 ZSCAN23Q3MJ62 389 aa11.63□□□□□ -0.55
LINC00402-201ENST00000419499 SMARCC2Q8TAQ2 1214 aa11.63□□□□□ -0.55
LINC00402-201ENST00000419499 NARFQ9UHQ1 456 aa11.63□□□□□ -0.55
LINC00402-201ENST00000419499 CCDC88AQ3V6T2 1871 aa11.63□□□□□ -0.55
LINC00402-201ENST00000419499 PRPF40AO75400 957 aaKnown RBP11.63□□□□□ -0.55
LINC00402-201ENST00000419499 UQCRFS1P1P0C7P4 283 aa11.63□□□□□ -0.55
LINC00402-201ENST00000419499 ERFEQ4G0M1 354 aa11.63□□□□□ -0.55
LINC00402-201ENST00000419499 TBC1D9BQ66K14 1250 aa11.63□□□□□ -0.55
LINC00402-201ENST00000419499 Q6ZUG5 572 aa11.63□□□□□ -0.55
LINC00402-201ENST00000419499 DHX32Q7L7V1 743 aaKnown RBP11.63□□□□□ -0.55
LINC00402-201ENST00000419499 GJD4Q96KN9 370 aaPredicted RBP11.63□□□□□ -0.55
LINC00402-201ENST00000419499 BRPF3Q9ULD4 1205 aa11.63□□□□□ -0.55
LINC00402-201ENST00000419499 WDR19Q8NEZ3 1342 aa11.62□□□□□ -0.55
LINC00402-201ENST00000419499 TMEM63CQ9P1W3 806 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms