RNA–Protein interactions for RNA: ENST00000419461.5

HLCS-203, Transcript of holocarboxylase synthetase, humanhuman

TSL 4

Gene HLCS, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-203ENST00000419461 USP48Q86UV5 1035 aa25.66■■□□□ 1.7
HLCS-203ENST00000419461 HSPA1AP0DMV8 641 aaKnown RBP25.65■■□□□ 1.7
HLCS-203ENST00000419461 HSPA1BP0DMV9 641 aaKnown RBP25.65■■□□□ 1.7
HLCS-203ENST00000419461 ZNF280AP59817 542 aaPredicted RBP25.65■■□□□ 1.7
HLCS-203ENST00000419461 DIEXFQ68CQ4 756 aaKnown RBP25.65■■□□□ 1.7
HLCS-203ENST00000419461 SMC4Q9NTJ3 1288 aa25.65■■□□□ 1.7
HLCS-203ENST00000419461 ABT1Q9ULW3 272 aaKnown RBP25.65■■□□□ 1.7
HLCS-203ENST00000419461 CCDC57Q2TAC2 916 aa25.64■■□□□ 1.7
HLCS-203ENST00000419461 DEFB115Q30KQ5 88 aa25.64■■□□□ 1.7
HLCS-203ENST00000419461 DACT2Q5SW24 774 aa25.64■■□□□ 1.7
HLCS-203ENST00000419461 ANKRD44Q8N8A2 993 aa25.64■■□□□ 1.7
HLCS-203ENST00000419461 AGBL3Q8NEM8 1001 aa25.64■■□□□ 1.7
HLCS-203ENST00000419461 COA1Q9GZY4 146 aa25.64■■□□□ 1.7
HLCS-203ENST00000419461 CELF2O95319 508 aaKnown RBP25.63■■□□□ 1.69
HLCS-203ENST00000419461 KIF4BQ2VIQ3 1234 aa25.63■■□□□ 1.69
HLCS-203ENST00000419461 CDC37L1Q7L3B6 337 aa25.63■■□□□ 1.69
HLCS-203ENST00000419461 PUS3Q9BZE2 481 aaKnown RBP25.63■■□□□ 1.69
HLCS-203ENST00000419461 USP44Q9H0E7 712 aa25.63■■□□□ 1.69
HLCS-203ENST00000419461 BICC1Q9H694 974 aaKnown RBP25.63■■□□□ 1.69
HLCS-203ENST00000419461 ZNF609O15014 1411 aa25.63■■□□□ 1.69
HLCS-203ENST00000419461 LDHAL6AQ6ZMR3 332 aa25.62■■□□□ 1.69
HLCS-203ENST00000419461 PSME4Q14997 1843 aa25.62■■□□□ 1.69
HLCS-203ENST00000419461 ADM5C9JUS6 153 aa25.61■■□□□ 1.69
HLCS-203ENST00000419461 PLIN1O60240 522 aa25.61■■□□□ 1.69
HLCS-203ENST00000419461 KCNJ4P48050 445 aa25.61■■□□□ 1.69
HLCS-203ENST00000419461 NOB1Q9ULX3 412 aaKnown RBP25.61■■□□□ 1.69
HLCS-203ENST00000419461 ZNF646O15015 1829 aaPredicted RBP25.6■■□□□ 1.69
HLCS-203ENST00000419461 TRPM7Q96QT4 1865 aa25.6■■□□□ 1.69
HLCS-203ENST00000419461 USP17L8P0C7I0 530 aa25.6■■□□□ 1.69
HLCS-203ENST00000419461 RABL6Q3YEC7 729 aaPredicted RBP25.6■■□□□ 1.69
HLCS-203ENST00000419461 TAF7LQ5H9L4 462 aa25.6■■□□□ 1.69
HLCS-203ENST00000419461 FBXW7Q969H0 707 aa25.6■■□□□ 1.69
HLCS-203ENST00000419461 ZNF408Q9H9D4 720 aa25.6■■□□□ 1.69
HLCS-203ENST00000419461 TLL2Q9Y6L7 1015 aa25.6■■□□□ 1.69
HLCS-203ENST00000419461 POLR2AP24928 1970 aaKnown RBP25.59■■□□□ 1.69
HLCS-203ENST00000419461 COL13A1Q5TAT6 717 aaPredicted RBP25.59■■□□□ 1.69
HLCS-203ENST00000419461 KRT26Q7Z3Y9 468 aa25.59■■□□□ 1.69
HLCS-203ENST00000419461 CD209Q9NNX6 404 aa25.59■■□□□ 1.69
HLCS-203ENST00000419461 CNNM1Q9NRU3 951 aa25.59■■□□□ 1.69
HLCS-203ENST00000419461 CT47B1P0C2W7 299 aaPredicted RBP25.58■■□□□ 1.69
HLCS-203ENST00000419461 RARSP54136 660 aaKnown RBP25.58■■□□□ 1.69
HLCS-203ENST00000419461 SCARF1Q14162 830 aa25.58■■□□□ 1.69
HLCS-203ENST00000419461 STRIP1Q5VSL9 837 aa25.58■■□□□ 1.69
HLCS-203ENST00000419461 CYP4F22Q6NT55 531 aa25.58■■□□□ 1.69
HLCS-203ENST00000419461 C15orf52Q6ZUT6 534 aaKnown RBP25.58■■□□□ 1.69
HLCS-203ENST00000419461 MYOZ2Q9NPC6 264 aa25.58■■□□□ 1.69
HLCS-203ENST00000419461 GGA3Q9NZ52 723 aa25.58■■□□□ 1.69
HLCS-203ENST00000419461 A0A1B0GUL6 1792 aa25.58■■□□□ 1.69
HLCS-203ENST00000419461 WDR33Q9C0J8 1336 aaKnown RBP25.58■■□□□ 1.69
HLCS-203ENST00000419461 GTF2IP78347 998 aa25.57■■□□□ 1.68
HLCS-203ENST00000419461 TTLL5Q6EMB2 1281 aa25.57■■□□□ 1.68
HLCS-203ENST00000419461 SAPCD2Q86UD0 394 aa25.57■■□□□ 1.68
HLCS-203ENST00000419461 SCAF8Q9UPN6 1271 aaKnown RBP25.57■■□□□ 1.68
HLCS-203ENST00000419461 RIPOR2Q9Y4F9 1068 aa25.57■■□□□ 1.68
HLCS-203ENST00000419461 KLHDC4Q8TBB5 520 aa25.56■■□□□ 1.68
HLCS-203ENST00000419461 DCPSQ96C86 337 aaKnown RBP25.56■■□□□ 1.68
HLCS-203ENST00000419461 BRPF1P55201 1214 aaPredicted RBP25.55■■□□□ 1.68
HLCS-203ENST00000419461 LRRC24Q50LG9 513 aa25.55■■□□□ 1.68
HLCS-203ENST00000419461 ANGEL2Q5VTE6 544 aaKnown RBP25.55■■□□□ 1.68
HLCS-203ENST00000419461 CAPNS2Q96L46 248 aa25.55■■□□□ 1.68
HLCS-203ENST00000419461 GRM1Q13255 1194 aa25.54■■□□□ 1.68
HLCS-203ENST00000419461 NBPF9Q3BBW0 867 aa25.54■■□□□ 1.68
HLCS-203ENST00000419461 CERS5Q8N5B7 392 aa25.54■■□□□ 1.68
HLCS-203ENST00000419461 FOXN1O15353 648 aa25.53■■□□□ 1.68
HLCS-203ENST00000419461 PAXIP1Q6ZW49 1069 aaPredicted RBP25.53■■□□□ 1.68
HLCS-203ENST00000419461 JAG2Q9Y219 1238 aa25.53■■□□□ 1.68
HLCS-203ENST00000419461 IL1R1P14778 569 aa25.52■■□□□ 1.68
HLCS-203ENST00000419461 KIAA0825Q8IV33 1275 aa25.52■■□□□ 1.68
HLCS-203ENST00000419461 WBP1LQ9NX94 342 aa25.52■■□□□ 1.68
HLCS-203ENST00000419461 AOC2O75106 756 aa25.51■■□□□ 1.67
HLCS-203ENST00000419461 RFX5P48382 616 aaPredicted RBP25.5■■□□□ 1.67
HLCS-203ENST00000419461 IFFO2Q5TF58 517 aa25.5■■□□□ 1.67
HLCS-203ENST00000419461 SULF1Q8IWU6 871 aa25.5■■□□□ 1.67
HLCS-203ENST00000419461 MYO3BQ8WXR4 1341 aa25.5■■□□□ 1.67
HLCS-203ENST00000419461 TNNQ9UQP3 1299 aa25.5■■□□□ 1.67
HLCS-203ENST00000419461 WNT10BO00744 389 aa25.49■■□□□ 1.67
HLCS-203ENST00000419461 SASH1O94885 1247 aa25.49■■□□□ 1.67
HLCS-203ENST00000419461 GYG1P46976 350 aa25.49■■□□□ 1.67
HLCS-203ENST00000419461 HNRNPUQ00839 825 aaKnown RBP eCLIP25.49■■□□□ 1.67
HLCS-203ENST00000419461 UBE4AQ14139 1066 aa25.49■■□□□ 1.67
HLCS-203ENST00000419461 ZNF804AQ7Z570 1209 aa25.49■■□□□ 1.67
HLCS-203ENST00000419461 CDCA5Q96FF9 252 aa25.49■■□□□ 1.67
HLCS-203ENST00000419461 FAM84BQ96KN1 310 aaPredicted RBP25.49■■□□□ 1.67
HLCS-203ENST00000419461 API5Q9BZZ5 524 aaKnown RBP25.49■■□□□ 1.67
HLCS-203ENST00000419461 BCAR3O75815 825 aa25.48■■□□□ 1.67
HLCS-203ENST00000419461 VGLL2Q8N8G2 317 aa25.48■■□□□ 1.67
HLCS-203ENST00000419461 PCDHAC2Q9Y5I4 1007 aa25.48■■□□□ 1.67
HLCS-203ENST00000419461 MROH5Q6ZUA9 1318 aa25.47■■□□□ 1.67
HLCS-203ENST00000419461 HUNKP57058 714 aa25.47■■□□□ 1.67
HLCS-203ENST00000419461 PRAMEF18Q5VWM3 479 aa25.47■■□□□ 1.67
HLCS-203ENST00000419461 OGFOD1Q8N543 542 aa25.47■■□□□ 1.67
HLCS-203ENST00000419461 ZBED3Q96IU2 234 aaPredicted RBP25.47■■□□□ 1.67
HLCS-203ENST00000419461 ZIC5Q96T25 663 aa25.47■■□□□ 1.67
HLCS-203ENST00000419461 GBA2Q9HCG7 927 aaPredicted RBP25.47■■□□□ 1.67
HLCS-203ENST00000419461 ECE1P42892 770 aa25.46■■□□□ 1.67
HLCS-203ENST00000419461 METTL24Q5JXM2 366 aa25.46■■□□□ 1.67
HLCS-203ENST00000419461 TDRD7Q8NHU6 1098 aaKnown RBP25.46■■□□□ 1.67
HLCS-203ENST00000419461 HHIPL1Q96JK4 782 aa25.46■■□□□ 1.67
HLCS-203ENST00000419461 PITPNM2Q9BZ72 1349 aa25.45■■□□□ 1.66
HLCS-203ENST00000419461 PTPN12Q05209 780 aaKnown RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms