RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 ATG7O95352 703 aa9.26□□□□□ -0.93
HMGN1-205ENST00000419378 ZEB1P37275 1124 aaPredicted RBP9.26□□□□□ -0.93
HMGN1-205ENST00000419378 RAB15P59190 212 aa9.26□□□□□ -0.93
HMGN1-205ENST00000419378 ARID5BQ14865 1188 aa9.26□□□□□ -0.93
HMGN1-205ENST00000419378 VASH1Q7L8A9 365 aaPredicted RBP9.26□□□□□ -0.93
HMGN1-205ENST00000419378 SPON1Q9HCB6 807 aa9.26□□□□□ -0.93
HMGN1-205ENST00000419378 SCN11AQ9UI33 1791 aa9.26□□□□□ -0.93
HMGN1-205ENST00000419378 LZTS3O60299 673 aaPredicted RBP9.25□□□□□ -0.93
HMGN1-205ENST00000419378 ZBTB7AO95365 584 aa9.25□□□□□ -0.93
HMGN1-205ENST00000419378 EML3Q32P44 896 aa9.25□□□□□ -0.93
HMGN1-205ENST00000419378 OXLD1Q5BKU9 147 aa9.25□□□□□ -0.93
HMGN1-205ENST00000419378 AKAP4Q5JQC9 854 aa9.25□□□□□ -0.93
HMGN1-205ENST00000419378 ATG3Q9NT62 314 aa9.25□□□□□ -0.93
HMGN1-205ENST00000419378 ASAP1Q9ULH1 1129 aa9.25□□□□□ -0.93
HMGN1-205ENST00000419378 MAP4K5Q9Y4K4 846 aa9.25□□□□□ -0.93
HMGN1-205ENST00000419378 MRC1P22897 1456 aa9.25□□□□□ -0.93
HMGN1-205ENST00000419378 ADAMTS7Q9UKP4 1686 aa9.25□□□□□ -0.93
HMGN1-205ENST00000419378 PNPLA7Q6ZV29 1317 aa9.25□□□□□ -0.93
HMGN1-205ENST00000419378 C4BP0C0L5 1744 aa9.25□□□□□ -0.93
HMGN1-205ENST00000419378 LOC102724428A0A0B4J2F2 783 aa9.24□□□□□ -0.93
HMGN1-205ENST00000419378 SIK1P57059 783 aa9.24□□□□□ -0.93
HMGN1-205ENST00000419378 CABP4P57796 275 aa9.24□□□□□ -0.93
HMGN1-205ENST00000419378 DDX10Q13206 875 aaKnown RBP9.24□□□□□ -0.93
HMGN1-205ENST00000419378 MTHFSDQ2M296 383 aaKnown RBP9.24□□□□□ -0.93
HMGN1-205ENST00000419378 TRAIPQ9BWF2 469 aa9.24□□□□□ -0.93
HMGN1-205ENST00000419378 MTFR1LQ9H019 292 aa9.24□□□□□ -0.93
HMGN1-205ENST00000419378 TFCP2L1Q9NZI6 479 aa9.24□□□□□ -0.93
HMGN1-205ENST00000419378 PCDHB11Q9Y5F2 797 aa9.24□□□□□ -0.93
HMGN1-205ENST00000419378 TLL2Q9Y6L7 1015 aa9.24□□□□□ -0.93
HMGN1-205ENST00000419378 VIRMAQ69YN4 1812 aaKnown RBP9.24□□□□□ -0.93
HMGN1-205ENST00000419378 ZNF831Q5JPB2 1677 aa9.23□□□□□ -0.93
HMGN1-205ENST00000419378 SIAH2O43255 324 aa9.23□□□□□ -0.93
HMGN1-205ENST00000419378 PRKAR2BP31323 418 aa9.23□□□□□ -0.93
HMGN1-205ENST00000419378 CRTC2Q53ET0 693 aaPredicted RBP9.23□□□□□ -0.93
HMGN1-205ENST00000419378 INTS6LQ5JSJ4 861 aaKnown RBP9.23□□□□□ -0.93
HMGN1-205ENST00000419378 SPRYD7Q5W111 196 aa9.23□□□□□ -0.93
HMGN1-205ENST00000419378 NUDCQ9Y266 331 aa9.23□□□□□ -0.93
HMGN1-205ENST00000419378 GOLGB1Q14789 3259 aaKnown RBP9.22□□□□□ -0.93
HMGN1-205ENST00000419378 UTRNP46939 3433 aa9.22□□□□□ -0.93
HMGN1-205ENST00000419378 UBR3Q6ZT12 1888 aa9.22□□□□□ -0.93
HMGN1-205ENST00000419378 CARNS1A5YM72 827 aa9.22□□□□□ -0.93
HMGN1-205ENST00000419378 ATP5J2-PTCD1G3V325 749 aa9.22□□□□□ -0.93
HMGN1-205ENST00000419378 WNT7AO00755 349 aa9.22□□□□□ -0.93
HMGN1-205ENST00000419378 U2AF1L5P0DN76 240 aaPredicted RBP9.22□□□□□ -0.93
HMGN1-205ENST00000419378 RASA1P20936 1047 aa9.22□□□□□ -0.93
HMGN1-205ENST00000419378 HMGB2P26583 209 aaKnown RBP9.22□□□□□ -0.93
HMGN1-205ENST00000419378 U2AF1Q01081 240 aaKnown RBP eCLIP9.22□□□□□ -0.934e-7■■■■■ 29.1
HMGN1-205ENST00000419378 ITPK1Q13572 414 aa9.22□□□□□ -0.93
HMGN1-205ENST00000419378 LINC00116Q8NCU8 138 aa9.22□□□□□ -0.93
HMGN1-205ENST00000419378 GAS2L2Q8NHY3 880 aa9.22□□□□□ -0.93
HMGN1-205ENST00000419378 MRGPRX2Q96LB1 330 aa9.22□□□□□ -0.93
HMGN1-205ENST00000419378 CDK15Q96Q40 435 aa9.22□□□□□ -0.93
HMGN1-205ENST00000419378 SLC52A2Q9HAB3 445 aa9.22□□□□□ -0.93
HMGN1-205ENST00000419378 PPP1R1BQ9UD71 204 aaPredicted RBP9.22□□□□□ -0.93
HMGN1-205ENST00000419378 NOD1Q9Y239 953 aa9.22□□□□□ -0.93
HMGN1-205ENST00000419378 MAP3K5Q99683 1374 aa9.22□□□□□ -0.93
HMGN1-205ENST00000419378 COL5A3P25940 1745 aaPredicted RBP9.22□□□□□ -0.93
HMGN1-205ENST00000419378 COL24A1Q17RW2 1714 aa9.22□□□□□ -0.93
HMGN1-205ENST00000419378 CICQ96RK0 1608 aaPredicted RBP9.21□□□□□ -0.93
HMGN1-205ENST00000419378 RNMTO43148 476 aaKnown RBP9.21□□□□□ -0.94
HMGN1-205ENST00000419378 RALBP1Q15311 655 aa9.21□□□□□ -0.94
HMGN1-205ENST00000419378 AMIGO3Q86WK7 504 aa9.21□□□□□ -0.94
HMGN1-205ENST00000419378 PHACTR3Q96KR7 559 aa9.21□□□□□ -0.94
HMGN1-205ENST00000419378 SLC4A9Q96Q91 983 aa9.21□□□□□ -0.94
HMGN1-205ENST00000419378 LGR6Q9HBX8 967 aa9.21□□□□□ -0.94
HMGN1-205ENST00000419378 TJP1Q07157 1748 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 FAM196BA6NMK8 535 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 GNAT3A8MTJ3 354 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 USP17L15C9J2P7 530 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 USP17L10C9JJH3 530 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 USP17L13C9JLJ4 530 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 USP17L12C9JPN9 530 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 USP17L11C9JVI0 530 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 USP17L21D6R901 530 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 USP17L18D6R9N7 530 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 USP17L22D6RA61 530 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 USP17L17D6RBQ6 530 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 USP17L19D6RCP7 530 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 USP17L20D6RJB6 530 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 ERVH48-1M5A8F1 160 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 FSHRP23945 695 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 GRM5P41594 1212 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 USP17L24Q0WX57 530 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 ZNF697Q5TEC3 545 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 COL23A1Q86Y22 540 aaPredicted RBP9.2□□□□□ -0.94
HMGN1-205ENST00000419378 SLC16A10Q8TF71 515 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 PRKD2Q9BZL6 878 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 ZMIZ1Q9ULJ6 1067 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 NOVA2Q9UNW9 492 aaKnown RBP9.2□□□□□ -0.94
HMGN1-205ENST00000419378 USTQ9Y2C2 406 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 KCPQ6ZWJ8 1503 aa9.2□□□□□ -0.94
HMGN1-205ENST00000419378 SIPA1L3O60292 1781 aaPredicted RBP9.19□□□□□ -0.94
HMGN1-205ENST00000419378 CLDN10P78369 228 aa9.19□□□□□ -0.94
HMGN1-205ENST00000419378 PDE4CQ08493 712 aa9.19□□□□□ -0.94
HMGN1-205ENST00000419378 FOXC1Q12948 553 aa9.19□□□□□ -0.94
HMGN1-205ENST00000419378 PTK7Q13308 1070 aa9.19□□□□□ -0.94
HMGN1-205ENST00000419378 ELOAQ14241 798 aaKnown RBP9.19□□□□□ -0.94
HMGN1-205ENST00000419378 TRIM50Q86XT4 487 aa9.19□□□□□ -0.94
HMGN1-205ENST00000419378 OGFOD1Q8N543 542 aa9.19□□□□□ -0.94
HMGN1-205ENST00000419378 MPNDQ8N594 471 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms