RNA–Protein interactions for RNA: ENST00000418909.6

SHROOM2-202, Transcript of shroom family member 2, humanhuman

TSL 1 (best) BASIC

Gene SHROOM2, Length 4,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM2-202ENST00000418909 RBM27Q9P2N5 1060 aaKnown RBP13.12□□□□□ -0.31
SHROOM2-202ENST00000418909 CDK12Q9NYV4 1490 aaPredicted RBP13.12□□□□□ -0.31
SHROOM2-202ENST00000418909 NBPF7P0C2Y1 421 aaPredicted RBP13.12□□□□□ -0.31
SHROOM2-202ENST00000418909 HOMER1Q86YM7 354 aa13.12□□□□□ -0.31
SHROOM2-202ENST00000418909 ZBTB7BO15156 539 aaPredicted RBP13.12□□□□□ -0.31
SHROOM2-202ENST00000418909 ZBTB43O43298 467 aa13.12□□□□□ -0.31
SHROOM2-202ENST00000418909 TAF5LO75529 589 aa13.12□□□□□ -0.31
SHROOM2-202ENST00000418909 RLBP1P12271 317 aa13.12□□□□□ -0.31
SHROOM2-202ENST00000418909 CC2D2BQ6DHV5 1058 aa13.12□□□□□ -0.31
SHROOM2-202ENST00000418909 CEP57L1Q8IYX8 460 aa13.12□□□□□ -0.31
SHROOM2-202ENST00000418909 IGHDP01880 384 aa13.11□□□□□ -0.31
SHROOM2-202ENST00000418909 ABCA6Q8N139 1617 aa13.11□□□□□ -0.31
SHROOM2-202ENST00000418909 RPS6KA4O75676 772 aa13.11□□□□□ -0.31
SHROOM2-202ENST00000418909 ERVV-1B6SEH8 477 aa13.11□□□□□ -0.31
SHROOM2-202ENST00000418909 PRPF40AO75400 957 aaKnown RBP13.11□□□□□ -0.31
SHROOM2-202ENST00000418909 CCT2P78371 535 aaKnown RBP13.11□□□□□ -0.31
SHROOM2-202ENST00000418909 ORC3Q9UBD5 711 aaPredicted RBP13.11□□□□□ -0.31
SHROOM2-202ENST00000418909 HEG1Q9ULI3 1381 aa13.11□□□□□ -0.31
SHROOM2-202ENST00000418909 CEP152O94986 1710 aa13.11□□□□□ -0.31
SHROOM2-202ENST00000418909 CALM1P0DP23 149 aa13.11□□□□□ -0.31
SHROOM2-202ENST00000418909 CALM2P0DP24 149 aa13.11□□□□□ -0.31
SHROOM2-202ENST00000418909 CALM3P0DP25 149 aa13.11□□□□□ -0.31
SHROOM2-202ENST00000418909 ADRA2BP18089 450 aa13.11□□□□□ -0.31
SHROOM2-202ENST00000418909 SLC27A3Q5K4L6 730 aa13.11□□□□□ -0.31
SHROOM2-202ENST00000418909 CCDC148Q8NFR7 591 aa13.11□□□□□ -0.31
SHROOM2-202ENST00000418909 CCDC39Q9UFE4 941 aa13.11□□□□□ -0.31
SHROOM2-202ENST00000418909 ATF5Q9Y2D1 282 aaPredicted RBP13.11□□□□□ -0.31
SHROOM2-202ENST00000418909 RBM8AQ9Y5S9 174 aaKnown RBP13.11□□□□□ -0.31
SHROOM2-202ENST00000418909 CYP27B1O15528 508 aa13.1□□□□□ -0.31
SHROOM2-202ENST00000418909 BBOX1O75936 387 aa13.1□□□□□ -0.31
SHROOM2-202ENST00000418909 DBNDD2Q9BQY9 259 aa13.1□□□□□ -0.31
SHROOM2-202ENST00000418909 RAD50Q92878 1312 aa13.1□□□□□ -0.31
SHROOM2-202ENST00000418909 SYCP1Q15431 976 aa13.1□□□□□ -0.31
SHROOM2-202ENST00000418909 CRB1P82279 1406 aa13.1□□□□□ -0.31
SHROOM2-202ENST00000418909 KDRP35968 1356 aa13.1□□□□□ -0.31
SHROOM2-202ENST00000418909 MBD4O95243 580 aa13.1□□□□□ -0.31
SHROOM2-202ENST00000418909 KLF18A0A0U1RQI7 1052 aa13.09□□□□□ -0.31
SHROOM2-202ENST00000418909 AXIN2Q9Y2T1 843 aa13.09□□□□□ -0.31
SHROOM2-202ENST00000418909 USP31Q70CQ4 1352 aa13.09□□□□□ -0.31
SHROOM2-202ENST00000418909 MATR3P43243 847 aaKnown RBP eCLIP13.09□□□□□ -0.31
SHROOM2-202ENST00000418909 FERMT3Q86UX7 667 aa13.09□□□□□ -0.31
SHROOM2-202ENST00000418909 KLHDC4Q8TBB5 520 aa13.09□□□□□ -0.31
SHROOM2-202ENST00000418909 GTF2IP78347 998 aa13.09□□□□□ -0.31
SHROOM2-202ENST00000418909 EAPPQ56P03 285 aaPredicted RBP13.09□□□□□ -0.31
SHROOM2-202ENST00000418909 CLEC4GQ6UXB4 293 aa13.09□□□□□ -0.31
SHROOM2-202ENST00000418909 SMC5Q8IY18 1101 aa13.09□□□□□ -0.31
SHROOM2-202ENST00000418909 TNNQ9UQP3 1299 aa13.09□□□□□ -0.31
SHROOM2-202ENST00000418909 MMP10P09238 476 aa13.09□□□□□ -0.31
SHROOM2-202ENST00000418909 KCNQ4P56696 695 aa13.09□□□□□ -0.31
SHROOM2-202ENST00000418909 NMIQ13287 307 aaPredicted RBP13.09□□□□□ -0.31
SHROOM2-202ENST00000418909 RTN1Q16799 776 aa13.09□□□□□ -0.31
SHROOM2-202ENST00000418909 BRF1Q92994 677 aa13.09□□□□□ -0.31
SHROOM2-202ENST00000418909 PDCL3Q9H2J4 239 aa13.09□□□□□ -0.31
SHROOM2-202ENST00000418909 RIMS1Q86UR5 1692 aaKnown RBP13.09□□□□□ -0.31
SHROOM2-202ENST00000418909 MFSD14BQ5SR56 506 aa13.08□□□□□ -0.31
SHROOM2-202ENST00000418909 TEKT1Q969V4 418 aa13.08□□□□□ -0.31
SHROOM2-202ENST00000418909 ESYT1Q9BSJ8 1104 aa13.08□□□□□ -0.31
SHROOM2-202ENST00000418909 SCAND2PQ9GZW5 306 aaPredicted RBP13.08□□□□□ -0.31
SHROOM2-202ENST00000418909 TMOD4Q9NZQ9 345 aa13.08□□□□□ -0.31
SHROOM2-202ENST00000418909 KDM4FA0A1W2PPD8 638 aa13.08□□□□□ -0.32
SHROOM2-202ENST00000418909 SMC2O95347 1197 aa13.08□□□□□ -0.32
SHROOM2-202ENST00000418909 CEP170BQ9Y4F5 1589 aaPredicted RBP13.08□□□□□ -0.32
SHROOM2-202ENST00000418909 TRIM21P19474 475 aaKnown RBP13.08□□□□□ -0.32
SHROOM2-202ENST00000418909 CCDC144CPQ8IYA2 1237 aa13.08□□□□□ -0.32
SHROOM2-202ENST00000418909 APPBP2Q92624 585 aa13.08□□□□□ -0.32
SHROOM2-202ENST00000418909 SLC26A6Q9BXS9 759 aa13.08□□□□□ -0.32
SHROOM2-202ENST00000418909 HELLSQ9NRZ9 838 aa13.08□□□□□ -0.32
SHROOM2-202ENST00000418909 TCP11L1Q9NUJ3 509 aa13.08□□□□□ -0.32
SHROOM2-202ENST00000418909 NCOA3Q9Y6Q9 1424 aa13.08□□□□□ -0.32
SHROOM2-202ENST00000418909 PLS1Q14651 629 aa13.08□□□□□ -0.32
SHROOM2-202ENST00000418909 CCDC70Q6NSX1 233 aa13.08□□□□□ -0.32
SHROOM2-202ENST00000418909 ARHGEF10LQ9HCE6 1279 aa13.08□□□□□ -0.32
SHROOM2-202ENST00000418909 PPP1R12BO60237 982 aaPredicted RBP13.07□□□□□ -0.32
SHROOM2-202ENST00000418909 KRI1Q8N9T8 703 aaKnown RBP13.07□□□□□ -0.32
SHROOM2-202ENST00000418909 ZNF526Q8TF50 670 aaPredicted RBP13.07□□□□□ -0.32
SHROOM2-202ENST00000418909 TNMDQ9H2S6 317 aa13.07□□□□□ -0.32
SHROOM2-202ENST00000418909 ZMYM4Q5VZL5 1548 aa13.07□□□□□ -0.32
SHROOM2-202ENST00000418909 CPSF1Q10570 1443 aaKnown RBP13.07□□□□□ -0.32
SHROOM2-202ENST00000418909 NCAPD2Q15021 1401 aa13.07□□□□□ -0.32
SHROOM2-202ENST00000418909 CCDC171Q6TFL3 1326 aa13.07□□□□□ -0.32
SHROOM2-202ENST00000418909 ANAPC15P60006 121 aa13.07□□□□□ -0.32
SHROOM2-202ENST00000418909 USP48Q86UV5 1035 aa13.07□□□□□ -0.32
SHROOM2-202ENST00000418909 TXNRD1Q16881 649 aa13.07□□□□□ -0.32
SHROOM2-202ENST00000418909 PLEKHF1Q96S99 279 aa13.07□□□□□ -0.32
SHROOM2-202ENST00000418909 DNAI2Q9GZS0 605 aa13.07□□□□□ -0.32
SHROOM2-202ENST00000418909 TTF2Q9UNY4 1162 aaKnown RBP13.07□□□□□ -0.32
SHROOM2-202ENST00000418909 RTL9Q8NET4 1388 aa13.07□□□□□ -0.32
SHROOM2-202ENST00000418909 IBSPP21815 317 aaPredicted RBP13.06□□□□□ -0.32
SHROOM2-202ENST00000418909 LEMD3Q9Y2U8 911 aa13.06□□□□□ -0.32
SHROOM2-202ENST00000418909 ADAMTS13Q76LX8 1427 aa13.06□□□□□ -0.32
SHROOM2-202ENST00000418909 XDHP47989 1333 aa13.06□□□□□ -0.32
SHROOM2-202ENST00000418909 KIF20AO95235 890 aa13.06□□□□□ -0.32
SHROOM2-202ENST00000418909 CCDC93Q567U6 631 aa13.06□□□□□ -0.32
SHROOM2-202ENST00000418909 ZFYVE27Q5T4F4 411 aa13.06□□□□□ -0.32
SHROOM2-202ENST00000418909 SPATA5Q8NB90 893 aa13.06□□□□□ -0.32
SHROOM2-202ENST00000418909 SAMM50Q9Y512 469 aa13.06□□□□□ -0.32
SHROOM2-202ENST00000418909 KIDINS220Q9ULH0 1771 aa13.06□□□□□ -0.32
SHROOM2-202ENST00000418909 NAP1L1P55209 391 aaKnown RBP13.06□□□□□ -0.32
SHROOM2-202ENST00000418909 UBE4AQ14139 1066 aa13.06□□□□□ -0.32
SHROOM2-202ENST00000418909 DALRD3Q5D0E6 543 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms