RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 GDF11O95390 407 aa8.22□□□□□ -1.09
HMGB1P49-201ENST00000418882 FMR1Q06787 632 aaKnown RBP eCLIP8.22□□□□□ -1.09
HMGB1P49-201ENST00000418882 TRAPPC3LQ5T215 181 aa8.22□□□□□ -1.09
HMGB1P49-201ENST00000418882 PI16Q6UXB8 463 aa8.22□□□□□ -1.09
HMGB1P49-201ENST00000418882 IL22RA1Q8N6P7 574 aa8.22□□□□□ -1.09
HMGB1P49-201ENST00000418882 NPHS2Q9NP85 383 aa8.22□□□□□ -1.09
HMGB1P49-201ENST00000418882 A0A1W2PP55 124 aa8.21□□□□□ -1.1
HMGB1P49-201ENST00000418882 METTL12A8MUP2 240 aa8.21□□□□□ -1.1
HMGB1P49-201ENST00000418882 EDN3P14138 238 aa8.21□□□□□ -1.1
HMGB1P49-201ENST00000418882 TXNDC11Q6PKC3 985 aa8.21□□□□□ -1.1
HMGB1P49-201ENST00000418882 DNAJC14Q6Y2X3 702 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P49-201ENST00000418882 WFDC8Q8IUA0 241 aa8.21□□□□□ -1.1
HMGB1P49-201ENST00000418882 NXPE3Q969Y0 559 aa8.21□□□□□ -1.1
HMGB1P49-201ENST00000418882 CCDC74AQ96AQ1 378 aa8.21□□□□□ -1.1
HMGB1P49-201ENST00000418882 SH2B1Q9NRF2 756 aaPredicted RBP8.21□□□□□ -1.1
HMGB1P49-201ENST00000418882 PDE2AO00408 941 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P49-201ENST00000418882 TM4SF5O14894 197 aa8.2□□□□□ -1.1
HMGB1P49-201ENST00000418882 SMNDC1O75940 238 aaKnown RBP eCLIP8.2□□□□□ -1.1
HMGB1P49-201ENST00000418882 EPHA1P21709 976 aa8.2□□□□□ -1.1
HMGB1P49-201ENST00000418882 TMEM102Q8N9M5 508 aaPredicted RBP8.2□□□□□ -1.1
HMGB1P49-201ENST00000418882 EPS8L3Q8TE67 593 aaKnown RBP8.2□□□□□ -1.1
HMGB1P49-201ENST00000418882 NOP53Q9NZM5 478 aaKnown RBP8.2□□□□□ -1.1
HMGB1P49-201ENST00000418882 WWC3Q9ULE0 1092 aa8.2□□□□□ -1.1
HMGB1P49-201ENST00000418882 PNMA6FA0A0J9YX94 578 aa8.19□□□□□ -1.1
HMGB1P49-201ENST00000418882 PIK3R2O00459 728 aa8.19□□□□□ -1.1
HMGB1P49-201ENST00000418882 P4HBP07237 508 aaKnown RBP8.19□□□□□ -1.1
HMGB1P49-201ENST00000418882 CDC25BP30305 580 aa8.19□□□□□ -1.1
HMGB1P49-201ENST00000418882 GRIK4Q16099 956 aa8.19□□□□□ -1.1
HMGB1P49-201ENST00000418882 ENOX2Q16206 610 aaKnown RBP8.19□□□□□ -1.1
HMGB1P49-201ENST00000418882 FMR1NBQ8N0W7 255 aaPredicted RBP8.19□□□□□ -1.1
HMGB1P49-201ENST00000418882 TMEM151AQ8N4L1 468 aa8.19□□□□□ -1.1
HMGB1P49-201ENST00000418882 TCF12Q99081 682 aa8.19□□□□□ -1.1
HMGB1P49-201ENST00000418882 ADAM19Q9H013 955 aa8.19□□□□□ -1.1
HMGB1P49-201ENST00000418882 DNAJC25Q9H1X3 360 aa8.19□□□□□ -1.1
HMGB1P49-201ENST00000418882 LINC01387J3KSC0 135 aa8.18□□□□□ -1.1
HMGB1P49-201ENST00000418882 CHRNA4P43681 627 aa8.18□□□□□ -1.1
HMGB1P49-201ENST00000418882 PLCB3Q01970 1234 aa8.18□□□□□ -1.1
HMGB1P49-201ENST00000418882 SETDB1Q15047 1291 aa8.18□□□□□ -1.1
HMGB1P49-201ENST00000418882 SHISA2Q6UWI4 295 aa8.18□□□□□ -1.1
HMGB1P49-201ENST00000418882 BHLHE41Q9C0J9 482 aaPredicted RBP8.18□□□□□ -1.1
HMGB1P49-201ENST00000418882 ANKRD33BA6NCL7 494 aa8.17□□□□□ -1.1
HMGB1P49-201ENST00000418882 NEFLP07196 543 aa8.17□□□□□ -1.1
HMGB1P49-201ENST00000418882 SPATA31C1P0DKV0 1188 aa8.17□□□□□ -1.1
HMGB1P49-201ENST00000418882 CDC27P30260 824 aa8.17□□□□□ -1.1
HMGB1P49-201ENST00000418882 MAPK8P45983 427 aa8.17□□□□□ -1.1
HMGB1P49-201ENST00000418882 GRIA4P48058 902 aa8.17□□□□□ -1.1
HMGB1P49-201ENST00000418882 TRIM26Q12899 539 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P49-201ENST00000418882 PLA2G4EQ3MJ16 856 aa8.17□□□□□ -1.1
HMGB1P49-201ENST00000418882 KIAA0319Q5VV43 1072 aa8.17□□□□□ -1.1
HMGB1P49-201ENST00000418882 HGSNATQ68CP4 663 aa8.17□□□□□ -1.1
HMGB1P49-201ENST00000418882 ZSCAN29Q8IWY8 852 aaPredicted RBP8.17□□□□□ -1.1
HMGB1P49-201ENST00000418882 GALNT11Q8NCW6 608 aa8.17□□□□□ -1.1
HMGB1P49-201ENST00000418882 SOX13Q9UN79 622 aa8.17□□□□□ -1.1
HMGB1P49-201ENST00000418882 SELPP16109 830 aa8.16□□□□□ -1.1
HMGB1P49-201ENST00000418882 PTPRAP18433 802 aa8.16□□□□□ -1.1
HMGB1P49-201ENST00000418882 TRIM28Q13263 835 aaKnown RBP8.16□□□□□ -1.1
HMGB1P49-201ENST00000418882 SPRED3Q2MJR0 410 aa8.16□□□□□ -1.1
HMGB1P49-201ENST00000418882 VN1R5Q7Z5H4 357 aa8.16□□□□□ -1.1
HMGB1P49-201ENST00000418882 CD163Q86VB7 1156 aa8.16□□□□□ -1.1
HMGB1P49-201ENST00000418882 NPAS4Q8IUM7 802 aa8.16□□□□□ -1.1
HMGB1P49-201ENST00000418882 CCNJLQ8IV13 435 aa8.16□□□□□ -1.1
HMGB1P49-201ENST00000418882 GLIS3Q8NEA6 775 aa8.16□□□□□ -1.1
HMGB1P49-201ENST00000418882 CARD10Q9BWT7 1032 aa8.16□□□□□ -1.1
HMGB1P49-201ENST00000418882 MUC3BQ9H195 1237 aa8.16□□□□□ -1.1
HMGB1P49-201ENST00000418882 LIN7BQ9HAP6 207 aa8.16□□□□□ -1.1
HMGB1P49-201ENST00000418882 RNF19AQ9NV58 838 aa8.16□□□□□ -1.1
HMGB1P49-201ENST00000418882 PRRT3Q5FWE3 981 aa8.15□□□□□ -1.1
HMGB1P49-201ENST00000418882 FBXO11Q86XK2 927 aa8.15□□□□□ -1.1
HMGB1P49-201ENST00000418882 ASAP3Q8TDY4 903 aa8.15□□□□□ -1.1
HMGB1P49-201ENST00000418882 PPME1Q9Y570 386 aa8.15□□□□□ -1.1
HMGB1P49-201ENST00000418882 SPDYE3A6NKU9 549 aa8.14□□□□□ -1.11
HMGB1P49-201ENST00000418882 C1QTNF9BB2RNN3 333 aa8.14□□□□□ -1.11
HMGB1P49-201ENST00000418882 DLL1O00548 723 aa8.14□□□□□ -1.11
HMGB1P49-201ENST00000418882 ELNP15502 786 aa8.14□□□□□ -1.11
HMGB1P49-201ENST00000418882 RAC1P63000 192 aa8.14□□□□□ -1.11
HMGB1P49-201ENST00000418882 GRM2Q14416 872 aa8.14□□□□□ -1.11
HMGB1P49-201ENST00000418882 CCDC27Q2M243 656 aa8.14□□□□□ -1.11
HMGB1P49-201ENST00000418882 DTWD1Q8N5C7 304 aa8.14□□□□□ -1.11
HMGB1P49-201ENST00000418882 ABCB6Q9NP58 842 aa8.14□□□□□ -1.11
HMGB1P49-201ENST00000418882 KCNK4Q9NYG8 393 aa8.14□□□□□ -1.11
HMGB1P49-201ENST00000418882 FOXD4L6Q3SYB3 417 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P49-201ENST00000418882 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.13□□□□□ -1.11
HMGB1P49-201ENST00000418882 FOXD4L3Q6VB84 417 aaPredicted RBP8.13□□□□□ -1.11
HMGB1P49-201ENST00000418882 ALYREFQ86V81 257 aaKnown RBP8.13□□□□□ -1.11
HMGB1P49-201ENST00000418882 BSNDQ8WZ55 320 aa8.13□□□□□ -1.11
HMGB1P49-201ENST00000418882 EHD4Q9H223 541 aa8.13□□□□□ -1.11
HMGB1P49-201ENST00000418882 H3BRJ5 948 aa8.12□□□□□ -1.11
HMGB1P49-201ENST00000418882 FSCN2O14926 492 aa8.12□□□□□ -1.11
HMGB1P49-201ENST00000418882 GADD45BO75293 160 aaPredicted RBP8.12□□□□□ -1.11
HMGB1P49-201ENST00000418882 CACTIN-AS1Q8N1I8 211 aa8.12□□□□□ -1.11
HMGB1P49-201ENST00000418882 A0A096LPE4 126 aa8.11□□□□□ -1.11
HMGB1P49-201ENST00000418882 A0A1W2PPZ6 126 aa8.11□□□□□ -1.11
HMGB1P49-201ENST00000418882 ZBTB7CA1YPR0 619 aa8.11□□□□□ -1.11
HMGB1P49-201ENST00000418882 SOX1O00570 391 aaPredicted RBP8.11□□□□□ -1.11
HMGB1P49-201ENST00000418882 DDX3YO15523 660 aaKnown RBP8.11□□□□□ -1.11
HMGB1P49-201ENST00000418882 ADAM11O75078 769 aa8.11□□□□□ -1.11
HMGB1P49-201ENST00000418882 PROCP04070 461 aa8.11□□□□□ -1.11
HMGB1P49-201ENST00000418882 TAGLNQ01995 201 aaKnown RBP8.11□□□□□ -1.11
HMGB1P49-201ENST00000418882 PRPF40BQ6NWY9 871 aaKnown RBP8.11□□□□□ -1.11
HMGB1P49-201ENST00000418882 KLHDC7BQ96G42 594 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms