RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 UQCRFS1P1P0C7P4 283 aa10.83□□□□□ -0.68
LINCMD1-201ENST00000418518 MCAMP43121 646 aa10.83□□□□□ -0.68
LINCMD1-201ENST00000418518 SKOR2Q2VWA4 1001 aaPredicted RBP10.83□□□□□ -0.68
LINCMD1-201ENST00000418518 GORABQ5T7V8 394 aa10.83□□□□□ -0.68
LINCMD1-201ENST00000418518 MEX3CQ5U5Q3 659 aaKnown RBP10.83□□□□□ -0.68
LINCMD1-201ENST00000418518 RGPD3A6NKT7 1758 aaPredicted RBP10.82□□□□□ -0.68
LINCMD1-201ENST00000418518 RGPD4Q7Z3J3 1758 aa10.82□□□□□ -0.68
LINCMD1-201ENST00000418518 ZBTB22O15209 634 aa10.82□□□□□ -0.68
LINCMD1-201ENST00000418518 TRAK2O60296 914 aa10.82□□□□□ -0.68
LINCMD1-201ENST00000418518 CHGBP05060 677 aa10.82□□□□□ -0.68
LINCMD1-201ENST00000418518 SLC5A1P13866 664 aa10.82□□□□□ -0.68
LINCMD1-201ENST00000418518 ZAP70P43403 619 aa10.82□□□□□ -0.68
LINCMD1-201ENST00000418518 PKP1Q13835 747 aa10.82□□□□□ -0.68
LINCMD1-201ENST00000418518 ANKRD1Q15327 319 aa10.82□□□□□ -0.68
LINCMD1-201ENST00000418518 TTF1Q15361 905 aaPredicted RBP10.82□□□□□ -0.68
LINCMD1-201ENST00000418518 BLOC1S2Q6QNY1 142 aa10.82□□□□□ -0.68
LINCMD1-201ENST00000418518 CCDC129Q6ZRS4 1044 aa10.82□□□□□ -0.68
LINCMD1-201ENST00000418518 APPBP2Q92624 585 aa10.82□□□□□ -0.68
LINCMD1-201ENST00000418518 CDC5LQ99459 802 aaKnown RBP10.82□□□□□ -0.68
LINCMD1-201ENST00000418518 NYXQ9GZU5 481 aa10.82□□□□□ -0.68
LINCMD1-201ENST00000418518 CCNL1Q9UK58 526 aaPredicted RBP10.82□□□□□ -0.68
LINCMD1-201ENST00000418518 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.82□□□□□ -0.68
LINCMD1-201ENST00000418518 CACNA1SQ13698 1873 aa10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 CCDC88AQ3V6T2 1871 aa10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 GOLGA6L22H0YM25 854 aa10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 M0R2C6 588 aa10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 LARGE1O95461 756 aa10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 CYP21A2P08686 494 aa10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 HSPD1P10809 573 aaKnown RBP10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 CPA1P15085 419 aa10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 ADD2P35612 726 aa10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 IGHMBP2P38935 993 aaKnown RBP10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 ST3GAL1Q11201 340 aa10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 CCDC102BQ68D86 513 aa10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 ZSCAN25Q6NSZ9 544 aa10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 SEPT12Q8IYM1 358 aa10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 OSBP2Q969R2 916 aa10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 AGXT2Q9BYV1 514 aa10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 BCL11BQ9C0K0 894 aaPredicted RBP10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 SEC31BQ9NQW1 1179 aa10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 TAF6LQ9Y6J9 622 aa10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 ZNF804BA4D1E1 1349 aa10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 ZMYM6O95789 1325 aa10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 LRRC37AA6NMS7 1700 aa10.81□□□□□ -0.68
LINCMD1-201ENST00000418518 FOXP2O15409 715 aa10.8□□□□□ -0.68
LINCMD1-201ENST00000418518 HMGB1P09429 215 aaKnown RBP10.8□□□□□ -0.68
LINCMD1-201ENST00000418518 PDIA4P13667 645 aaKnown RBP10.8□□□□□ -0.68
LINCMD1-201ENST00000418518 ADRA2BP18089 450 aa10.8□□□□□ -0.68
LINCMD1-201ENST00000418518 PHKA1P46020 1223 aa10.8□□□□□ -0.68
LINCMD1-201ENST00000418518 TOB2Q14106 344 aaPredicted RBP10.8□□□□□ -0.68
LINCMD1-201ENST00000418518 UBE3CQ15386 1083 aa10.8□□□□□ -0.68
LINCMD1-201ENST00000418518 ERFEQ4G0M1 354 aa10.8□□□□□ -0.68
LINCMD1-201ENST00000418518 TBC1D9BQ66K14 1250 aa10.8□□□□□ -0.68
LINCMD1-201ENST00000418518 FBXL16Q8N461 479 aa10.8□□□□□ -0.68
LINCMD1-201ENST00000418518 MPHOSPH8Q99549 860 aa10.8□□□□□ -0.68
LINCMD1-201ENST00000418518 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.8□□□□□ -0.68
LINCMD1-201ENST00000418518 RTCBQ9Y3I0 505 aaKnown RBP10.8□□□□□ -0.68
LINCMD1-201ENST00000418518 NRXN2Q9P2S2 1712 aa10.8□□□□□ -0.68
LINCMD1-201ENST00000418518 WDR33Q9C0J8 1336 aaKnown RBP10.8□□□□□ -0.68
LINCMD1-201ENST00000418518 GNPATO15228 680 aa10.79□□□□□ -0.68
LINCMD1-201ENST00000418518 FKBP4Q02790 459 aaKnown RBP eCLIP10.79□□□□□ -0.68
LINCMD1-201ENST00000418518 COL9A3Q14050 684 aaPredicted RBP10.79□□□□□ -0.68
LINCMD1-201ENST00000418518 ME3Q16798 604 aa10.79□□□□□ -0.68
LINCMD1-201ENST00000418518 PI16Q6UXB8 463 aa10.79□□□□□ -0.68
LINCMD1-201ENST00000418518 STOX1Q6ZVD7 989 aa10.79□□□□□ -0.68
LINCMD1-201ENST00000418518 NOL8Q76FK4 1167 aaKnown RBP10.79□□□□□ -0.68
LINCMD1-201ENST00000418518 NEK1Q96PY6 1258 aa10.79□□□□□ -0.68
LINCMD1-201ENST00000418518 LMBRD1Q9NUN5 540 aa10.79□□□□□ -0.68
LINCMD1-201ENST00000418518 BSDC1Q9NW68 430 aaPredicted RBP10.79□□□□□ -0.68
LINCMD1-201ENST00000418518 DUOX1Q9NRD9 1551 aa10.78□□□□□ -0.68
LINCMD1-201ENST00000418518 TCRBV5S4A2TA0A5A2 114 aa10.78□□□□□ -0.68
LINCMD1-201ENST00000418518 KCNQ4P56696 695 aa10.78□□□□□ -0.68
LINCMD1-201ENST00000418518 CHRNDQ07001 517 aa10.78□□□□□ -0.68
LINCMD1-201ENST00000418518 UBE4AQ14139 1066 aa10.78□□□□□ -0.68
LINCMD1-201ENST00000418518 KLHL40Q2TBA0 621 aa10.78□□□□□ -0.68
LINCMD1-201ENST00000418518 SLFNL1Q499Z3 407 aa10.78□□□□□ -0.68
LINCMD1-201ENST00000418518 C3orf67Q6ZVT6 689 aa10.78□□□□□ -0.68
LINCMD1-201ENST00000418518 PIH1D3Q9NQM4 214 aaKnown RBP10.78□□□□□ -0.68
LINCMD1-201ENST00000418518 SRP68Q9UHB9 627 aaKnown RBP10.78□□□□□ -0.68
LINCMD1-201ENST00000418518 CTNNA3Q9UI47 895 aa10.78□□□□□ -0.68
LINCMD1-201ENST00000418518 TPCN1Q9ULQ1 816 aa10.78□□□□□ -0.68
LINCMD1-201ENST00000418518 ISY1Q9ULR0 285 aaKnown RBP10.78□□□□□ -0.68
LINCMD1-201ENST00000418518 TNS1Q9HBL0 1735 aaKnown RBP10.78□□□□□ -0.68
LINCMD1-201ENST00000418518 CARMIL3Q8ND23 1372 aa10.77□□□□□ -0.68
LINCMD1-201ENST00000418518 LAMB1P07942 1786 aa10.77□□□□□ -0.68
LINCMD1-201ENST00000418518 FSD2A1L4K1 749 aa10.77□□□□□ -0.69
LINCMD1-201ENST00000418518 FAM177BA6PVY3 158 aa10.77□□□□□ -0.69
LINCMD1-201ENST00000418518 GPAA1O43292 621 aa10.77□□□□□ -0.69
LINCMD1-201ENST00000418518 ZPR1O75312 459 aa10.77□□□□□ -0.69
LINCMD1-201ENST00000418518 PDE6AP16499 860 aa10.77□□□□□ -0.69
LINCMD1-201ENST00000418518 EXOSC10Q01780 885 aaKnown RBP10.77□□□□□ -0.69
LINCMD1-201ENST00000418518 RASGRF1Q13972 1273 aa10.77□□□□□ -0.69
LINCMD1-201ENST00000418518 ALX1Q15699 326 aa10.77□□□□□ -0.69
LINCMD1-201ENST00000418518 SLC27A3Q5K4L6 730 aa10.77□□□□□ -0.69
LINCMD1-201ENST00000418518 AMIGO3Q86WK7 504 aa10.77□□□□□ -0.69
LINCMD1-201ENST00000418518 ANKRD18AQ8IVF6 992 aa10.77□□□□□ -0.69
LINCMD1-201ENST00000418518 SPATA5Q8NB90 893 aa10.77□□□□□ -0.69
LINCMD1-201ENST00000418518 TMEM87AQ8NBN3 555 aa10.77□□□□□ -0.69
LINCMD1-201ENST00000418518 ARHGEF1Q92888 912 aaKnown RBP10.77□□□□□ -0.69
LINCMD1-201ENST00000418518 SETDB2Q96T68 719 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms