RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 ELP3Q9H9T3 547 aa8.59□□□□□ -1.03
NIFKP3-201ENST00000417799 NDFIP2Q9NV92 336 aa8.59□□□□□ -1.03
NIFKP3-201ENST00000417799 HFM1A2PYH4 1435 aa8.59□□□□□ -1.03
NIFKP3-201ENST00000417799 SETD5Q9C0A6 1442 aa8.59□□□□□ -1.03
NIFKP3-201ENST00000417799 MAST1Q9Y2H9 1570 aa8.59□□□□□ -1.03
NIFKP3-201ENST00000417799 CROCC2H7BZ55 1655 aa8.59□□□□□ -1.03
NIFKP3-201ENST00000417799 KDM5CP41229 1560 aa8.58□□□□□ -1.04
NIFKP3-201ENST00000417799 NAIPQ13075 1403 aa8.58□□□□□ -1.04
NIFKP3-201ENST00000417799 LDHBP07195 334 aaKnown RBP8.58□□□□□ -1.04
NIFKP3-201ENST00000417799 ORC1Q13415 861 aa8.58□□□□□ -1.04
NIFKP3-201ENST00000417799 ABHD17AQ96GS6 310 aa8.58□□□□□ -1.04
NIFKP3-201ENST00000417799 CSRNP1Q96S65 589 aa8.58□□□□□ -1.04
NIFKP3-201ENST00000417799 STRN4Q9NRL3 753 aa8.58□□□□□ -1.04
NIFKP3-201ENST00000417799 MARK1Q9P0L2 795 aa8.58□□□□□ -1.04
NIFKP3-201ENST00000417799 MLH3Q9UHC1 1453 aa8.57□□□□□ -1.04
NIFKP3-201ENST00000417799 PNMA6FA0A0J9YX94 578 aa8.57□□□□□ -1.04
NIFKP3-201ENST00000417799 CDC14CA4D256 554 aa8.57□□□□□ -1.04
NIFKP3-201ENST00000417799 UNCXA6NJT0 531 aa8.57□□□□□ -1.04
NIFKP3-201ENST00000417799 E9PSI1 815 aa8.57□□□□□ -1.04
NIFKP3-201ENST00000417799 TNFRSF21O75509 655 aa8.57□□□□□ -1.04
NIFKP3-201ENST00000417799 FGD1P98174 961 aa8.57□□□□□ -1.04
NIFKP3-201ENST00000417799 ATP2B2Q01814 1243 aa8.57□□□□□ -1.04
NIFKP3-201ENST00000417799 CCINQ13939 588 aa8.57□□□□□ -1.04
NIFKP3-201ENST00000417799 ENOX2Q16206 610 aaKnown RBP8.57□□□□□ -1.04
NIFKP3-201ENST00000417799 FOXR1Q6PIV2 292 aa8.57□□□□□ -1.04
NIFKP3-201ENST00000417799 NLRP13Q86W25 1043 aa8.57□□□□□ -1.04
NIFKP3-201ENST00000417799 GSX2Q9BZM3 304 aa8.57□□□□□ -1.04
NIFKP3-201ENST00000417799 TMEM63CQ9P1W3 806 aa8.57□□□□□ -1.04
NIFKP3-201ENST00000417799 FOXD3Q9UJU5 478 aaPredicted RBP8.57□□□□□ -1.04
NIFKP3-201ENST00000417799 ATXN7L1Q9ULK2 861 aaPredicted RBP8.57□□□□□ -1.04
NIFKP3-201ENST00000417799 PHF24Q9UPV7 400 aa8.57□□□□□ -1.04
NIFKP3-201ENST00000417799 KIF15Q9NS87 1388 aa8.57□□□□□ -1.04
NIFKP3-201ENST00000417799 ATP7AQ04656 1500 aa8.56□□□□□ -1.04
NIFKP3-201ENST00000417799 ZFYVE16Q7Z3T8 1539 aa8.56□□□□□ -1.04
NIFKP3-201ENST00000417799 EIF1AYO14602 144 aaKnown RBP8.56□□□□□ -1.04
NIFKP3-201ENST00000417799 SASH3O75995 380 aa8.56□□□□□ -1.04
NIFKP3-201ENST00000417799 VWA5B2Q8N398 1253 aa8.56□□□□□ -1.04
NIFKP3-201ENST00000417799 SNX29Q8TEQ0 813 aa8.56□□□□□ -1.04
NIFKP3-201ENST00000417799 TRERF1Q96PN7 1200 aa8.56□□□□□ -1.04
NIFKP3-201ENST00000417799 CFHR5Q9BXR6 569 aa8.56□□□□□ -1.04
NIFKP3-201ENST00000417799 DNAJC25Q9H1X3 360 aa8.56□□□□□ -1.04
NIFKP3-201ENST00000417799 WWC3Q9ULE0 1092 aa8.56□□□□□ -1.04
NIFKP3-201ENST00000417799 RICTORQ6R327 1708 aa8.56□□□□□ -1.04
NIFKP3-201ENST00000417799 RAB3GAP2Q9H2M9 1393 aa8.56□□□□□ -1.04
NIFKP3-201ENST00000417799 FRMPD1Q5SYB0 1578 aa8.56□□□□□ -1.04
NIFKP3-201ENST00000417799 ADGBQ8N7X0 1667 aa8.56□□□□□ -1.04
NIFKP3-201ENST00000417799 CPNE3O75131 537 aaKnown RBP8.55□□□□□ -1.04
NIFKP3-201ENST00000417799 PHACTR2O75167 634 aa8.55□□□□□ -1.04
NIFKP3-201ENST00000417799 PRPF40AO75400 957 aaKnown RBP8.55□□□□□ -1.04
NIFKP3-201ENST00000417799 CD33P20138 364 aa8.55□□□□□ -1.04
NIFKP3-201ENST00000417799 SV2AQ7L0J3 742 aa8.55□□□□□ -1.04
NIFKP3-201ENST00000417799 KRT25Q7Z3Z0 450 aa8.55□□□□□ -1.04
NIFKP3-201ENST00000417799 MRRFQ96E11 262 aaKnown RBP8.55□□□□□ -1.04
NIFKP3-201ENST00000417799 ABI2Q9NYB9 513 aaPredicted RBP8.55□□□□□ -1.04
NIFKP3-201ENST00000417799 STK17AQ9UEE5 414 aa8.55□□□□□ -1.04
NIFKP3-201ENST00000417799 HCN2Q9UL51 889 aa8.55□□□□□ -1.04
NIFKP3-201ENST00000417799 MAGI2Q86UL8 1455 aa8.55□□□□□ -1.04
NIFKP3-201ENST00000417799 PLXNC1O60486 1568 aa8.55□□□□□ -1.04
NIFKP3-201ENST00000417799 INO80Q9ULG1 1556 aaPredicted RBP8.55□□□□□ -1.04
NIFKP3-201ENST00000417799 ANKRD50Q9ULJ7 1429 aa8.54□□□□□ -1.04
NIFKP3-201ENST00000417799 ZMYM4Q5VZL5 1548 aa8.54□□□□□ -1.04
NIFKP3-201ENST00000417799 HECW2Q9P2P5 1572 aa8.54□□□□□ -1.04
NIFKP3-201ENST00000417799 DHX29Q7Z478 1369 aaKnown RBP8.54□□□□□ -1.04
NIFKP3-201ENST00000417799 GPR25O00155 361 aa8.54□□□□□ -1.04
NIFKP3-201ENST00000417799 FGFR3P22607 806 aa8.54□□□□□ -1.04
NIFKP3-201ENST00000417799 TARSP26639 723 aaKnown RBP8.54□□□□□ -1.04
NIFKP3-201ENST00000417799 SPEM2Q0P670 501 aa8.54□□□□□ -1.04
NIFKP3-201ENST00000417799 GRIN2CQ14957 1233 aa8.54□□□□□ -1.04
NIFKP3-201ENST00000417799 TTC39BQ5VTQ0 682 aaPredicted RBP8.54□□□□□ -1.04
NIFKP3-201ENST00000417799 ALG1LQ6GMV1 187 aa8.54□□□□□ -1.04
NIFKP3-201ENST00000417799 NANOS1Q8WY41 292 aaKnown RBP8.54□□□□□ -1.04
NIFKP3-201ENST00000417799 PNMA5Q96PV4 448 aa8.54□□□□□ -1.04
NIFKP3-201ENST00000417799 SETDB2Q96T68 719 aa8.54□□□□□ -1.04
NIFKP3-201ENST00000417799 BCL11AQ9H165 835 aa8.54□□□□□ -1.04
NIFKP3-201ENST00000417799 ZFYVE28Q9HCC9 887 aa8.54□□□□□ -1.04
NIFKP3-201ENST00000417799 DUOX2Q9NRD8 1548 aa8.54□□□□□ -1.04
NIFKP3-201ENST00000417799 YEATS2Q9ULM3 1422 aa8.54□□□□□ -1.04
NIFKP3-201ENST00000417799 KIDINS220Q9ULH0 1771 aa8.53□□□□□ -1.04
NIFKP3-201ENST00000417799 SLC30A3Q99726 388 aa8.53□□□□□ -1.04
NIFKP3-201ENST00000417799 DUSP9Q99956 384 aaKnown RBP8.53□□□□□ -1.04
NIFKP3-201ENST00000417799 CNTN3Q9P232 1028 aa8.53□□□□□ -1.04
NIFKP3-201ENST00000417799 GCC2Q8IWJ2 1684 aa8.53□□□□□ -1.04
NIFKP3-201ENST00000417799 KDM6BO15054 1643 aa8.52□□□□□ -1.05
NIFKP3-201ENST00000417799 RARAP10276 462 aa8.52□□□□□ -1.05
NIFKP3-201ENST00000417799 XPCQ01831 940 aaPredicted RBP8.52□□□□□ -1.05
NIFKP3-201ENST00000417799 FAM182BQ5T319 152 aa8.52□□□□□ -1.05
NIFKP3-201ENST00000417799 USPL1Q5W0Q7 1092 aa8.52□□□□□ -1.05
NIFKP3-201ENST00000417799 C1orf127Q8N9H9 656 aa8.52□□□□□ -1.05
NIFKP3-201ENST00000417799 PMEPA1Q969W9 287 aa8.52□□□□□ -1.05
NIFKP3-201ENST00000417799 EFCC1Q9HA90 598 aa8.52□□□□□ -1.05
NIFKP3-201ENST00000417799 NXF1Q9UBU9 619 aaKnown RBP8.52□□□□□ -1.05
NIFKP3-201ENST00000417799 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.52□□□□□ -1.05
NIFKP3-201ENST00000417799 ERBINQ96RT1 1412 aa8.52□□□□□ -1.05
NIFKP3-201ENST00000417799 ATP10AO60312 1499 aa8.51□□□□□ -1.05
NIFKP3-201ENST00000417799 A2MP01023 1474 aa8.51□□□□□ -1.05
NIFKP3-201ENST00000417799 WIPF1O43516 503 aa8.51□□□□□ -1.05
NIFKP3-201ENST00000417799 WFS1O76024 890 aa8.51□□□□□ -1.05
NIFKP3-201ENST00000417799 NFKB1P19838 968 aa8.51□□□□□ -1.05
NIFKP3-201ENST00000417799 CTBSQ01459 385 aa8.51□□□□□ -1.05
NIFKP3-201ENST00000417799 FBF1Q8TES7 1133 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms