RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 SLFN5Q08AF3 891 aa19.2■□□□□ 0.66
UBXN4-203ENST00000416538 RBM26Q5T8P6 1007 aaKnown RBP19.2■□□□□ 0.66
UBXN4-203ENST00000416538 CYP4F22Q6NT55 531 aa19.2■□□□□ 0.66
UBXN4-203ENST00000416538 USP48Q86UV5 1035 aa19.2■□□□□ 0.66
UBXN4-203ENST00000416538 KAZALD1Q96I82 304 aa19.2■□□□□ 0.66
UBXN4-203ENST00000416538 CHRNDQ07001 517 aa19.19■□□□□ 0.66
UBXN4-203ENST00000416538 SLC4A10Q6U841 1118 aa19.19■□□□□ 0.66
UBXN4-203ENST00000416538 SAPCD2Q86UD0 394 aa19.19■□□□□ 0.66
UBXN4-203ENST00000416538 CAPNS2Q96L46 248 aa19.19■□□□□ 0.66
UBXN4-203ENST00000416538 ZNF408Q9H9D4 720 aa19.19■□□□□ 0.66
UBXN4-203ENST00000416538 GGA3Q9NZ52 723 aa19.19■□□□□ 0.66
UBXN4-203ENST00000416538 ZNF804BA4D1E1 1349 aa19.19■□□□□ 0.66
UBXN4-203ENST00000416538 ANKRD18BA2A2Z9 1011 aa19.18■□□□□ 0.66
UBXN4-203ENST00000416538 E9PSI1 815 aa19.18■□□□□ 0.66
UBXN4-203ENST00000416538 G3V3G9 751 aa19.18■□□□□ 0.66
UBXN4-203ENST00000416538 CAPN15O75808 1086 aa19.18■□□□□ 0.66
UBXN4-203ENST00000416538 DACT2Q5SW24 774 aa19.18■□□□□ 0.66
UBXN4-203ENST00000416538 DCAF8Q5TAQ9 597 aa19.18■□□□□ 0.66
UBXN4-203ENST00000416538 LMBR1LQ6UX01 489 aa19.18■□□□□ 0.66
UBXN4-203ENST00000416538 CDC37L1Q7L3B6 337 aa19.18■□□□□ 0.66
UBXN4-203ENST00000416538 PODNQ7Z5L7 613 aa19.18■□□□□ 0.66
UBXN4-203ENST00000416538 AGBL3Q8NEM8 1001 aa19.18■□□□□ 0.66
UBXN4-203ENST00000416538 SSH1Q8WYL5 1049 aa19.18■□□□□ 0.66
UBXN4-203ENST00000416538 ZNF594Q96JF6 807 aaPredicted RBP19.18■□□□□ 0.66
UBXN4-203ENST00000416538 WBP1LQ9NX94 342 aa19.18■□□□□ 0.66
UBXN4-203ENST00000416538 USP17L3A6NCW0 530 aa19.17■□□□□ 0.66
UBXN4-203ENST00000416538 USP17L4A6NCW7 530 aa19.17■□□□□ 0.66
UBXN4-203ENST00000416538 ALDH1L1O75891 902 aa19.17■□□□□ 0.66
UBXN4-203ENST00000416538 USP17L1Q7RTZ2 530 aa19.17■□□□□ 0.66
UBXN4-203ENST00000416538 KRT26Q7Z3Y9 468 aa19.17■□□□□ 0.66
UBXN4-203ENST00000416538 HELBQ8NG08 1087 aaPredicted RBP19.17■□□□□ 0.66
UBXN4-203ENST00000416538 SUCLG2Q96I99 432 aa19.17■□□□□ 0.66
UBXN4-203ENST00000416538 MPHOSPH8Q99549 860 aa19.17■□□□□ 0.66
UBXN4-203ENST00000416538 SRCIN1Q9C0H9 1055 aa19.17■□□□□ 0.66
UBXN4-203ENST00000416538 LEMD3Q9Y2U8 911 aa19.17■□□□□ 0.66
UBXN4-203ENST00000416538 CHMP3Q9Y3E7 222 aa19.17■□□□□ 0.66
UBXN4-203ENST00000416538 TAF5LO75529 589 aa19.16■□□□□ 0.66
UBXN4-203ENST00000416538 NBPF7P0C2Y1 421 aaPredicted RBP19.16■□□□□ 0.66
UBXN4-203ENST00000416538 GRM1Q13255 1194 aa19.16■□□□□ 0.66
UBXN4-203ENST00000416538 AOC2O75106 756 aa19.15■□□□□ 0.66
UBXN4-203ENST00000416538 IFIT5Q13325 482 aaKnown RBP19.15■□□□□ 0.66
UBXN4-203ENST00000416538 PAXIP1Q6ZW49 1069 aaPredicted RBP19.15■□□□□ 0.66
UBXN4-203ENST00000416538 TRMT2AQ8IZ69 625 aaKnown RBP19.15■□□□□ 0.66
UBXN4-203ENST00000416538 ANKRD2Q9GZV1 360 aa19.15■□□□□ 0.66
UBXN4-203ENST00000416538 COA1Q9GZY4 146 aa19.15■□□□□ 0.66
UBXN4-203ENST00000416538 UTYO14607 1347 aa19.15■□□□□ 0.66
UBXN4-203ENST00000416538 PAPPA2Q9BXP8 1791 aa19.14■□□□□ 0.66
UBXN4-203ENST00000416538 MYOZ2Q9NPC6 264 aa19.14■□□□□ 0.65
UBXN4-203ENST00000416538 C9orf78Q9NZ63 289 aaPredicted RBP19.14■□□□□ 0.65
UBXN4-203ENST00000416538 SCAF8Q9UPN6 1271 aaKnown RBP19.14■□□□□ 0.65
UBXN4-203ENST00000416538 CCER2I3L3R5 266 aa19.13■□□□□ 0.65
UBXN4-203ENST00000416538 USP17L8P0C7I0 530 aa19.13■□□□□ 0.65
UBXN4-203ENST00000416538 ANGEL2Q5VTE6 544 aaKnown RBP19.13■□□□□ 0.65
UBXN4-203ENST00000416538 FBXW7Q969H0 707 aa19.13■□□□□ 0.65
UBXN4-203ENST00000416538 MYH13Q9UKX3 1938 aa19.12■□□□□ 0.65
UBXN4-203ENST00000416538 PTPRCP08575 1304 aa19.12■□□□□ 0.65
UBXN4-203ENST00000416538 HSPA8P11142 646 aaKnown RBP19.12■□□□□ 0.65
UBXN4-203ENST00000416538 SCARF1Q14162 830 aa19.12■□□□□ 0.65
UBXN4-203ENST00000416538 STRIP1Q5VSL9 837 aa19.12■□□□□ 0.65
UBXN4-203ENST00000416538 TNS4Q8IZW8 715 aa19.12■□□□□ 0.65
UBXN4-203ENST00000416538 ANKRD44Q8N8A2 993 aa19.12■□□□□ 0.65
UBXN4-203ENST00000416538 DCPSQ96C86 337 aaKnown RBP19.12■□□□□ 0.65
UBXN4-203ENST00000416538 ZIC5Q96T25 663 aa19.12■□□□□ 0.65
UBXN4-203ENST00000416538 PUS3Q9BZE2 481 aaKnown RBP19.12■□□□□ 0.65
UBXN4-203ENST00000416538 ECE1P42892 770 aa19.11■□□□□ 0.65
UBXN4-203ENST00000416538 NBPF9Q3BBW0 867 aa19.11■□□□□ 0.65
UBXN4-203ENST00000416538 C15orf52Q6ZUT6 534 aaKnown RBP19.11■□□□□ 0.65
UBXN4-203ENST00000416538 CERS5Q8N5B7 392 aa19.11■□□□□ 0.65
UBXN4-203ENST00000416538 CDCA5Q96FF9 252 aa19.11■□□□□ 0.65
UBXN4-203ENST00000416538 BICC1Q9H694 974 aaKnown RBP19.11■□□□□ 0.65
UBXN4-203ENST00000416538 CD209Q9NNX6 404 aa19.11■□□□□ 0.65
UBXN4-203ENST00000416538 CASP8AP2Q9UKL3 1982 aa19.11■□□□□ 0.65
UBXN4-203ENST00000416538 KCNJ4P48050 445 aa19.1■□□□□ 0.65
UBXN4-203ENST00000416538 CTCFP49711 727 aaPredicted RBP19.1■□□□□ 0.65
UBXN4-203ENST00000416538 LBX1P52954 281 aa19.1■□□□□ 0.65
UBXN4-203ENST00000416538 RABL6Q3YEC7 729 aaPredicted RBP19.1■□□□□ 0.65
UBXN4-203ENST00000416538 HHIPL1Q96JK4 782 aa19.1■□□□□ 0.65
UBXN4-203ENST00000416538 SASH1O94885 1247 aa19.09■□□□□ 0.65
UBXN4-203ENST00000416538 HUNKP57058 714 aa19.09■□□□□ 0.65
UBXN4-203ENST00000416538 GTF2IP78347 998 aa19.09■□□□□ 0.65
UBXN4-203ENST00000416538 CCDC57Q2TAC2 916 aa19.09■□□□□ 0.65
UBXN4-203ENST00000416538 SULF1Q8IWU6 871 aa19.09■□□□□ 0.65
UBXN4-203ENST00000416538 AIDAQ96BJ3 306 aa19.09■□□□□ 0.65
UBXN4-203ENST00000416538 GBA2Q9HCG7 927 aaPredicted RBP19.09■□□□□ 0.65
UBXN4-203ENST00000416538 AKAP11Q9UKA4 1901 aa19.09■□□□□ 0.65
UBXN4-203ENST00000416538 MYO3BQ8WXR4 1341 aa19.08■□□□□ 0.65
UBXN4-203ENST00000416538 PITPNM2Q9BZ72 1349 aa19.08■□□□□ 0.65
UBXN4-203ENST00000416538 FAM155AB1AL88 458 aaPredicted RBP19.08■□□□□ 0.64
UBXN4-203ENST00000416538 WNT10BO00744 389 aa19.08■□□□□ 0.64
UBXN4-203ENST00000416538 TTLL5Q6EMB2 1281 aa19.08■□□□□ 0.64
UBXN4-203ENST00000416538 LDHAL6AQ6ZMR3 332 aa19.08■□□□□ 0.64
UBXN4-203ENST00000416538 KIAA0825Q8IV33 1275 aa19.08■□□□□ 0.64
UBXN4-203ENST00000416538 PRDM10Q9NQV6 1147 aa19.08■□□□□ 0.64
UBXN4-203ENST00000416538 CNNM1Q9NRU3 951 aa19.08■□□□□ 0.64
UBXN4-203ENST00000416538 PLIN1O60240 522 aa19.07■□□□□ 0.64
UBXN4-203ENST00000416538 MAP2K1Q02750 393 aaPredicted RBP19.07■□□□□ 0.64
UBXN4-203ENST00000416538 ALDH1L2Q3SY69 923 aa19.07■□□□□ 0.64
UBXN4-203ENST00000416538 TAF7LQ5H9L4 462 aa19.07■□□□□ 0.64
UBXN4-203ENST00000416538 ZBED3Q96IU2 234 aaPredicted RBP19.07■□□□□ 0.64
UBXN4-203ENST00000416538 USP44Q9H0E7 712 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms