RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 EYA3Q99504 573 aa9.69□□□□□ -0.86
CTNND1-206ENST00000415361 GSTTP1A0A1W2PQM5 241 aa9.69□□□□□ -0.86
CTNND1-206ENST00000415361 TSPY3P0CV98 308 aa9.69□□□□□ -0.86
CTNND1-206ENST00000415361 TSPY8P0CW00 308 aa9.69□□□□□ -0.86
CTNND1-206ENST00000415361 MAP2K1Q02750 393 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-206ENST00000415361 SKAP1Q86WV1 359 aa9.69□□□□□ -0.86
CTNND1-206ENST00000415361 PLVAPQ9BX97 442 aa9.69□□□□□ -0.86
CTNND1-206ENST00000415361 SHROOM2Q13796 1616 aa9.69□□□□□ -0.86
CTNND1-206ENST00000415361 ABCA9Q8IUA7 1624 aa9.69□□□□□ -0.86
CTNND1-206ENST00000415361 PLXNC1O60486 1568 aa9.69□□□□□ -0.86
CTNND1-206ENST00000415361 PHKG2P15735 406 aa9.69□□□□□ -0.86
CTNND1-206ENST00000415361 WTAPQ15007 396 aa9.69□□□□□ -0.86
CTNND1-206ENST00000415361 KLHL10Q6JEL2 608 aa9.69□□□□□ -0.86
CTNND1-206ENST00000415361 C16orf71Q8IYS4 520 aaPredicted RBP9.69□□□□□ -0.86
CTNND1-206ENST00000415361 RHPN1Q8TCX5 695 aa9.69□□□□□ -0.86
CTNND1-206ENST00000415361 FAM193AP78312 1265 aa9.69□□□□□ -0.86
CTNND1-206ENST00000415361 SMC1AQ14683 1233 aaKnown RBP9.69□□□□□ -0.86
CTNND1-206ENST00000415361 TDRD12Q587J7 1177 aaKnown RBP9.69□□□□□ -0.86
CTNND1-206ENST00000415361 KRT27Q7Z3Y8 459 aa9.69□□□□□ -0.86
CTNND1-206ENST00000415361 TBC1D5Q92609 795 aa9.69□□□□□ -0.86
CTNND1-206ENST00000415361 ANKRD2Q9GZV1 360 aa9.69□□□□□ -0.86
CTNND1-206ENST00000415361 RTL9Q8NET4 1388 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 SHTN1A0MZ66 631 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 TMCO3Q6UWJ1 677 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 ARHGEF25Q86VW2 580 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 FSIP1Q8NA03 581 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 KIF18AQ8NI77 898 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 CERKQ8TCT0 537 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 NAP1L4Q99733 375 aaKnown RBP9.68□□□□□ -0.86
CTNND1-206ENST00000415361 VEZTQ9HBM0 779 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 SAMM50Q9Y512 469 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 GJA3Q9Y6H8 435 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 STX6O43752 255 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 IL15P40933 162 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-206ENST00000415361 BMP2KLQ5H9B9 411 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 EXOC1Q9NV70 894 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 ERVV-2B6SEH9 535 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 G2E3Q7L622 706 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 TSNARE1Q96NA8 513 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.68□□□□□ -0.867e-6■□□□□ 8.3
CTNND1-206ENST00000415361 IFFO1Q0D2I5 559 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 CAMK4Q16566 473 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 FERMT3Q86UX7 667 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 BICD1Q96G01 975 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 SH3TC1Q8TE82 1336 aa9.68□□□□□ -0.86
CTNND1-206ENST00000415361 MYCNP04198 464 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-206ENST00000415361 PRKCSHP14314 528 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-206ENST00000415361 CYP7A1P22680 504 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 PICALMQ13492 652 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 KIF4BQ2VIQ3 1234 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 UNC5CLQ8IV45 518 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 CCDC82Q8N4S0 544 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 PLBD2Q8NHP8 589 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 CARD10Q9BWT7 1032 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 ORC3Q9UBD5 711 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-206ENST00000415361 NCBP1Q09161 790 aaKnown RBP9.67□□□□□ -0.86
CTNND1-206ENST00000415361 CCDC102BQ68D86 513 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 APBB1IPQ7Z5R6 666 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-206ENST00000415361 CTAGE1Q96RT6 745 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 PRPHP41219 470 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 PARP10Q53GL7 1025 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 CTNNBL1Q8WYA6 563 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-206ENST00000415361 TET3O43151 1660 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 H0YIN7 160 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 ACTN2P35609 894 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 HAND2P61296 217 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 FAM196AQ6ZSG2 479 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 SEPT12Q8IYM1 358 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 TNNQ9UQP3 1299 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 SYCE3A1L190 88 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 PRC1O43663 620 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 PPM1FP49593 454 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-206ENST00000415361 IFIT1BQ5T764 474 aaKnown RBP9.67□□□□□ -0.86
CTNND1-206ENST00000415361 CLIP2Q9UDT6 1046 aa9.67□□□□□ -0.86
CTNND1-206ENST00000415361 ARHGAP31Q2M1Z3 1444 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 MYOM2P54296 1465 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 KRT13P13646 458 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 RBM25P49756 843 aaKnown RBP9.66□□□□□ -0.86
CTNND1-206ENST00000415361 GRIPAP1Q4V328 841 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 SREK1Q8WXA9 508 aaKnown RBP9.66□□□□□ -0.86
CTNND1-206ENST00000415361 HOMER2Q9NSB8 354 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 SSX2IPQ9Y2D8 614 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 GJB2P29033 226 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 TTC22Q5TAA0 569 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 SLC26A6Q9BXS9 759 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.66□□□□□ -0.864e-9■□□□□ 9.9
CTNND1-206ENST00000415361 KCNQ3O43525 872 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 KCNQ4P56696 695 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 TCERG1LQ5VWI1 586 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 MICALCLQ6ZW33 695 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 AFF2P51816 1311 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 USP6P35125 1406 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 UFL1O94874 794 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 LIG1P18858 919 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 TNNI2P48788 182 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 SPAG1Q07617 926 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 UVSSAQ2YD98 709 aa9.66□□□□□ -0.86
CTNND1-206ENST00000415361 NAA16Q6N069 864 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-206ENST00000415361 BBXQ8WY36 941 aaPredicted RBP9.66□□□□□ -0.86
CTNND1-206ENST00000415361 BICC1Q9H694 974 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms