RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 TTC39AQ5SRH9 613 aa7.53□□□□□ -1.2
ITGB1-203ENST00000414670 GRAPLQ8TC17 118 aaPredicted RBP7.53□□□□□ -1.2
ITGB1-203ENST00000414670 RBM17Q96I25 401 aaKnown RBP7.53□□□□□ -1.2
ITGB1-203ENST00000414670 DNAJC2Q99543 621 aaKnown RBP7.53□□□□□ -1.2
ITGB1-203ENST00000414670 HAUS7Q99871 368 aa7.53□□□□□ -1.2
ITGB1-203ENST00000414670 BRIP1Q9BX63 1249 aa7.53□□□□□ -1.2
ITGB1-203ENST00000414670 ANKRD2Q9GZV1 360 aa7.53□□□□□ -1.2
ITGB1-203ENST00000414670 MINPP1Q9UNW1 487 aa7.53□□□□□ -1.2
ITGB1-203ENST00000414670 SNAP23O00161 211 aa7.52□□□□□ -1.21
ITGB1-203ENST00000414670 HIP1O00291 1037 aa7.52□□□□□ -1.21
ITGB1-203ENST00000414670 HOXA10P31260 410 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-203ENST00000414670 MCM4P33991 863 aa7.52□□□□□ -1.21
ITGB1-203ENST00000414670 PDE6BP35913 854 aa7.52□□□□□ -1.21
ITGB1-203ENST00000414670 UBE4AQ14139 1066 aa7.52□□□□□ -1.21
ITGB1-203ENST00000414670 SLC16A10Q8TF71 515 aa7.52□□□□□ -1.21
ITGB1-203ENST00000414670 ZNF512BQ96KM6 892 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-203ENST00000414670 CRAMP1Q96RY5 1269 aa7.52□□□□□ -1.21
ITGB1-203ENST00000414670 MAP7D2Q96T17 732 aa7.52□□□□□ -1.21
ITGB1-203ENST00000414670 ESYT1Q9BSJ8 1104 aa7.52□□□□□ -1.21
ITGB1-203ENST00000414670 FSD1Q9BTV5 496 aa7.52□□□□□ -1.21
ITGB1-203ENST00000414670 C22orf23Q9BZE7 217 aa7.52□□□□□ -1.21
ITGB1-203ENST00000414670 DIAPH3Q9NSV4 1193 aa7.52□□□□□ -1.21
ITGB1-203ENST00000414670 U3KPZ7 1027 aaPredicted RBP7.52□□□□□ -1.21
ITGB1-203ENST00000414670 GOLIM4O00461 696 aa7.51□□□□□ -1.21
ITGB1-203ENST00000414670 BBOX1O75936 387 aa7.51□□□□□ -1.21
ITGB1-203ENST00000414670 REC8O95072 547 aa7.51□□□□□ -1.21
ITGB1-203ENST00000414670 UQCRFS1P1P0C7P4 283 aa7.51□□□□□ -1.21
ITGB1-203ENST00000414670 NPR1P16066 1061 aa7.51□□□□□ -1.21
ITGB1-203ENST00000414670 PHKA1P46020 1223 aa7.51□□□□□ -1.21
ITGB1-203ENST00000414670 KCNJ4P48050 445 aa7.51□□□□□ -1.21
ITGB1-203ENST00000414670 SKOR2Q2VWA4 1001 aaPredicted RBP7.51□□□□□ -1.21
ITGB1-203ENST00000414670 CCDC102BQ68D86 513 aa7.51□□□□□ -1.21
ITGB1-203ENST00000414670 TICAM2Q86XR7 235 aa7.51□□□□□ -1.21
ITGB1-203ENST00000414670 KBTBD3Q8NAB2 608 aa7.51□□□□□ -1.21
ITGB1-203ENST00000414670 RUFY2Q8WXA3 655 aa7.51□□□□□ -1.21
ITGB1-203ENST00000414670 UPF1Q92900 1129 aaKnown RBP eCLIP7.51□□□□□ -1.21
ITGB1-203ENST00000414670 EDC3Q96F86 508 aaKnown RBP7.51□□□□□ -1.21
ITGB1-203ENST00000414670 TBC1D32Q96NH3 1257 aa7.51□□□□□ -1.21
ITGB1-203ENST00000414670 PDGFDQ9GZP0 370 aaPredicted RBP7.51□□□□□ -1.21
ITGB1-203ENST00000414670 PAG1Q9NWQ8 432 aa7.51□□□□□ -1.21
ITGB1-203ENST00000414670 CHMP5Q9NZZ3 219 aa7.51□□□□□ -1.21
ITGB1-203ENST00000414670 NDUFB9Q9Y6M9 179 aa7.51□□□□□ -1.21
ITGB1-203ENST00000414670 DDX60Q8IY21 1712 aaKnown RBP7.5□□□□□ -1.21
ITGB1-203ENST00000414670 SGSM2O43147 1006 aa7.5□□□□□ -1.21
ITGB1-203ENST00000414670 SRGNP10124 158 aa7.5□□□□□ -1.21
ITGB1-203ENST00000414670 ARID4AP29374 1257 aaPredicted RBP7.5□□□□□ -1.21
ITGB1-203ENST00000414670 ALDH1B1P30837 517 aa7.5□□□□□ -1.21
ITGB1-203ENST00000414670 FKBP4Q02790 459 aaKnown RBP eCLIP7.5□□□□□ -1.21
ITGB1-203ENST00000414670 SCARF1Q14162 830 aa7.5□□□□□ -1.21
ITGB1-203ENST00000414670 CWC27Q6UX04 472 aaKnown RBP7.5□□□□□ -1.21
ITGB1-203ENST00000414670 TMC4Q7Z404 712 aa7.5□□□□□ -1.21
ITGB1-203ENST00000414670 SNRKQ9NRH2 765 aa7.5□□□□□ -1.21
ITGB1-203ENST00000414670 LEMD3Q9Y2U8 911 aa7.5□□□□□ -1.21
ITGB1-203ENST00000414670 LAMB2P55268 1798 aa7.5□□□□□ -1.21
ITGB1-203ENST00000414670 ZNF804BA4D1E1 1349 aa7.5□□□□□ -1.21
ITGB1-203ENST00000414670 RFX7Q2KHR2 1363 aa7.49□□□□□ -1.21
ITGB1-203ENST00000414670 COL4A1P02462 1669 aa7.49□□□□□ -1.21
ITGB1-203ENST00000414670 WTIPA6NIX2 430 aaPredicted RBP7.49□□□□□ -1.21
ITGB1-203ENST00000414670 ESPNB1AK53 854 aa7.49□□□□□ -1.21
ITGB1-203ENST00000414670 H0YIN7 160 aa7.49□□□□□ -1.21
ITGB1-203ENST00000414670 PPEF1O14829 653 aaPredicted RBP7.49□□□□□ -1.21
ITGB1-203ENST00000414670 EPB41L2O43491 1005 aaKnown RBP7.49□□□□□ -1.21
ITGB1-203ENST00000414670 MCAMP43121 646 aa7.49□□□□□ -1.21
ITGB1-203ENST00000414670 ZAP70P43403 619 aa7.49□□□□□ -1.21
ITGB1-203ENST00000414670 RBM25P49756 843 aaKnown RBP7.49□□□□□ -1.21
ITGB1-203ENST00000414670 BCAMP50895 628 aa7.49□□□□□ -1.21
ITGB1-203ENST00000414670 NMIQ13287 307 aaPredicted RBP7.49□□□□□ -1.21
ITGB1-203ENST00000414670 LRRFIP1Q32MZ4 808 aaKnown RBP7.49□□□□□ -1.21
ITGB1-203ENST00000414670 HS1BP3Q53T59 392 aa7.49□□□□□ -1.21
ITGB1-203ENST00000414670 CAVIN4Q5BKX8 364 aa7.49□□□□□ -1.21
ITGB1-203ENST00000414670 KIAA1211Q6ZU35 1233 aa7.49□□□□□ -1.21
ITGB1-203ENST00000414670 C2CD5Q86YS7 1000 aa7.49□□□□□ -1.21
ITGB1-203ENST00000414670 SP8Q8IXZ3 490 aa7.49□□□□□ -1.21
ITGB1-203ENST00000414670 MASTLQ96GX5 879 aa7.49□□□□□ -1.21
ITGB1-203ENST00000414670 USP26Q9BXU7 913 aa7.49□□□□□ -1.21
ITGB1-203ENST00000414670 ANO2Q9NQ90 1003 aa7.49□□□□□ -1.21
ITGB1-203ENST00000414670 GNL3LQ9NVN8 582 aaKnown RBP7.49□□□□□ -1.21
ITGB1-203ENST00000414670 HMG20BQ9P0W2 317 aa7.49□□□□□ -1.21
ITGB1-203ENST00000414670 ANKIB1Q9P2G1 1089 aa7.49□□□□□ -1.21
ITGB1-203ENST00000414670 CIZ1Q9ULV3 898 aaPredicted RBP7.49□□□□□ -1.21
ITGB1-203ENST00000414670 XDHP47989 1333 aa7.49□□□□□ -1.21
ITGB1-203ENST00000414670 RAD50Q92878 1312 aa7.49□□□□□ -1.21
ITGB1-203ENST00000414670 TNRC6CQ9HCJ0 1690 aaKnown RBP7.48□□□□□ -1.21
ITGB1-203ENST00000414670 DDX11L8A8MPP1 907 aa7.48□□□□□ -1.21
ITGB1-203ENST00000414670 TRAK2O60296 914 aa7.48□□□□□ -1.21
ITGB1-203ENST00000414670 ATP2B4P23634 1241 aa7.48□□□□□ -1.21
ITGB1-203ENST00000414670 GYG1P46976 350 aa7.48□□□□□ -1.21
ITGB1-203ENST00000414670 GPSM2P81274 684 aa7.48□□□□□ -1.21
ITGB1-203ENST00000414670 RASGRF1Q13972 1273 aa7.48□□□□□ -1.21
ITGB1-203ENST00000414670 TTF1Q15361 905 aaPredicted RBP7.48□□□□□ -1.21
ITGB1-203ENST00000414670 STYK1Q6J9G0 422 aa7.48□□□□□ -1.21
ITGB1-203ENST00000414670 PI16Q6UXB8 463 aa7.48□□□□□ -1.21
ITGB1-203ENST00000414670 FBXO33Q7Z6M2 555 aa7.48□□□□□ -1.21
ITGB1-203ENST00000414670 MTERF4Q7Z6M4 381 aaKnown RBP7.48□□□□□ -1.21
ITGB1-203ENST00000414670 VPS37DQ86XT2 251 aa7.48□□□□□ -1.21
ITGB1-203ENST00000414670 SPATA5Q8NB90 893 aa7.48□□□□□ -1.21
ITGB1-203ENST00000414670 FAM84BQ96KN1 310 aaPredicted RBP7.48□□□□□ -1.21
ITGB1-203ENST00000414670 FAM227BQ96M60 508 aa7.48□□□□□ -1.21
ITGB1-203ENST00000414670 NAP1L5Q96NT1 182 aaPredicted RBP7.48□□□□□ -1.21
ITGB1-203ENST00000414670 PPP1R9BQ96SB3 815 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms