RNA–Protein interactions for RNA: ENST00000414443.5

UBE2F-205, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2 BASIC

Gene UBE2F, Length 2,100 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-205ENST00000414443 SMC3Q9UQE7 1217 aa23.46■■□□□ 1.35
UBE2F-205ENST00000414443 ZFYP08048 801 aaPredicted RBP23.45■■□□□ 1.35
UBE2F-205ENST00000414443 LRRFIP1Q32MZ4 808 aaKnown RBP23.45■■□□□ 1.35
UBE2F-205ENST00000414443 RTL9Q8NET4 1388 aa23.45■■□□□ 1.34
UBE2F-205ENST00000414443 ANKRD1Q15327 319 aa23.45■■□□□ 1.34
UBE2F-205ENST00000414443 KLHL40Q2TBA0 621 aa23.45■■□□□ 1.34
UBE2F-205ENST00000414443 NECAB1Q8N987 351 aa23.45■■□□□ 1.34
UBE2F-205ENST00000414443 LPIN2Q92539 896 aa23.45■■□□□ 1.34
UBE2F-205ENST00000414443 MPHOSPH8Q99549 860 aa23.45■■□□□ 1.34
UBE2F-205ENST00000414443 DDX49Q9Y6V7 483 aaKnown RBP23.45■■□□□ 1.34
UBE2F-205ENST00000414443 WDR33Q9C0J8 1336 aaKnown RBP23.45■■□□□ 1.34
UBE2F-205ENST00000414443 FSD2A1L4K1 749 aa23.44■■□□□ 1.34
UBE2F-205ENST00000414443 PHKA1P46020 1223 aa23.44■■□□□ 1.34
UBE2F-205ENST00000414443 CCDC102BQ68D86 513 aa23.44■■□□□ 1.34
UBE2F-205ENST00000414443 STOX1Q6ZVD7 989 aa23.44■■□□□ 1.34
UBE2F-205ENST00000414443 HSP90B1P14625 803 aaKnown RBP23.44■■□□□ 1.34
UBE2F-205ENST00000414443 GJD4Q96KN9 370 aaPredicted RBP23.44■■□□□ 1.34
UBE2F-205ENST00000414443 DTNBO60941 627 aa23.43■■□□□ 1.34
UBE2F-205ENST00000414443 PRPF40AO75400 957 aaKnown RBP23.43■■□□□ 1.34
UBE2F-205ENST00000414443 SYT1P21579 422 aa23.43■■□□□ 1.34
UBE2F-205ENST00000414443 CERKQ8TCT0 537 aa23.43■■□□□ 1.34
UBE2F-205ENST00000414443 SCN7AQ01118 1682 aa23.43■■□□□ 1.34
UBE2F-205ENST00000414443 TCHHQ07283 1943 aa23.43■■□□□ 1.34
UBE2F-205ENST00000414443 CASZ1Q86V15 1759 aa23.42■■□□□ 1.34
UBE2F-205ENST00000414443 A0A0G2JLW4 131 aa23.42■■□□□ 1.34
UBE2F-205ENST00000414443 SNAP23O00161 211 aa23.42■■□□□ 1.34
UBE2F-205ENST00000414443 ARID4AP29374 1257 aaPredicted RBP23.42■■□□□ 1.34
UBE2F-205ENST00000414443 WASHC4Q2M389 1173 aa23.42■■□□□ 1.34
UBE2F-205ENST00000414443 COL4A1P02462 1669 aa23.42■■□□□ 1.34
UBE2F-205ENST00000414443 GJB2P29033 226 aa23.42■■□□□ 1.34
UBE2F-205ENST00000414443 RC3H1Q5TC82 1133 aaKnown RBP23.42■■□□□ 1.34
UBE2F-205ENST00000414443 MEX3CQ5U5Q3 659 aaKnown RBP23.42■■□□□ 1.34
UBE2F-205ENST00000414443 BCL2L12Q9HB09 334 aa23.42■■□□□ 1.34
UBE2F-205ENST00000414443 SBF2Q86WG5 1849 aa23.42■■□□□ 1.34
UBE2F-205ENST00000414443 FOXP2O15409 715 aa23.41■■□□□ 1.34
UBE2F-205ENST00000414443 ERFEQ4G0M1 354 aa23.41■■□□□ 1.34
UBE2F-205ENST00000414443 APPBP2Q92624 585 aa23.41■■□□□ 1.34
UBE2F-205ENST00000414443 PUS7LQ9H0K6 701 aaKnown RBP23.41■■□□□ 1.34
UBE2F-205ENST00000414443 GOLGA6L3A6NEY3 463 aa23.41■■□□□ 1.34
UBE2F-205ENST00000414443 STX6O43752 255 aa23.41■■□□□ 1.34
UBE2F-205ENST00000414443 HSPA1LP34931 641 aa23.41■■□□□ 1.34
UBE2F-205ENST00000414443 RPS6KA4O75676 772 aa23.4■■□□□ 1.34
UBE2F-205ENST00000414443 IGHMBP2P38935 993 aaKnown RBP23.4■■□□□ 1.34
UBE2F-205ENST00000414443 TAF1P21675 1872 aa23.39■■□□□ 1.34
UBE2F-205ENST00000414443 AFF2P51816 1311 aa23.39■■□□□ 1.34
UBE2F-205ENST00000414443 UQCRFS1P1P0C7P4 283 aa23.39■■□□□ 1.34
UBE2F-205ENST00000414443 SLC5A1P13866 664 aa23.39■■□□□ 1.34
UBE2F-205ENST00000414443 TBC1D9BQ66K14 1250 aa23.39■■□□□ 1.34
UBE2F-205ENST00000414443 PIH1D3Q9NQM4 214 aaKnown RBP23.39■■□□□ 1.34
UBE2F-205ENST00000414443 TAF1LQ8IZX4 1826 aa23.39■■□□□ 1.33
UBE2F-205ENST00000414443 LY75O60449 1722 aa23.39■■□□□ 1.33
UBE2F-205ENST00000414443 RGL2O15211 777 aa23.39■■□□□ 1.33
UBE2F-205ENST00000414443 ZSCAN22P10073 491 aaPredicted RBP23.39■■□□□ 1.33
UBE2F-205ENST00000414443 TTF1Q15361 905 aaPredicted RBP23.39■■□□□ 1.33
UBE2F-205ENST00000414443 TTLL5Q6EMB2 1281 aa23.39■■□□□ 1.33
UBE2F-205ENST00000414443 BICDL1Q6ZP65 573 aa23.39■■□□□ 1.33
UBE2F-205ENST00000414443 Q6ZUG5 572 aa23.39■■□□□ 1.33
UBE2F-205ENST00000414443 C3orf67Q6ZVT6 689 aa23.39■■□□□ 1.33
UBE2F-205ENST00000414443 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.39■■□□□ 1.33
UBE2F-205ENST00000414443 CCNL1Q9UK58 526 aaPredicted RBP23.39■■□□□ 1.33
UBE2F-205ENST00000414443 NARFQ9UHQ1 456 aa23.38■■□□□ 1.33
UBE2F-205ENST00000414443 ADD2P35612 726 aa23.38■■□□□ 1.33
UBE2F-205ENST00000414443 FOXD4L6Q3SYB3 417 aaPredicted RBP23.38■■□□□ 1.33
UBE2F-205ENST00000414443 L1TD1Q5T7N2 865 aaKnown RBP23.38■■□□□ 1.33
UBE2F-205ENST00000414443 FOXD4L3Q6VB84 417 aaPredicted RBP23.38■■□□□ 1.33
UBE2F-205ENST00000414443 GPT2Q8TD30 523 aa23.38■■□□□ 1.33
UBE2F-205ENST00000414443 SRP68Q9UHB9 627 aaKnown RBP23.38■■□□□ 1.33
UBE2F-205ENST00000414443 E7EWF7 191 aa23.37■■□□□ 1.33
UBE2F-205ENST00000414443 GNPATO15228 680 aa23.37■■□□□ 1.33
UBE2F-205ENST00000414443 HMGB1P09429 215 aaKnown RBP23.37■■□□□ 1.33
UBE2F-205ENST00000414443 SLC9C2Q5TAH2 1124 aa23.37■■□□□ 1.33
UBE2F-205ENST00000414443 ONECUT3O60422 494 aaPredicted RBP23.36■■□□□ 1.33
UBE2F-205ENST00000414443 DHX32Q7L7V1 743 aaKnown RBP23.36■■□□□ 1.33
UBE2F-205ENST00000414443 AMIGO3Q86WK7 504 aa23.36■■□□□ 1.33
UBE2F-205ENST00000414443 LRRC2Q9BYS8 371 aa23.36■■□□□ 1.33
UBE2F-205ENST00000414443 GPAA1O43292 621 aa23.36■■□□□ 1.33
UBE2F-205ENST00000414443 CHRNDQ07001 517 aa23.36■■□□□ 1.33
UBE2F-205ENST00000414443 STK3Q13188 491 aa23.36■■□□□ 1.33
UBE2F-205ENST00000414443 SF3B3Q15393 1217 aaKnown RBP23.36■■□□□ 1.33
UBE2F-205ENST00000414443 ZSCAN25Q6NSZ9 544 aa23.36■■□□□ 1.33
UBE2F-205ENST00000414443 IDH1O75874 414 aaKnown RBP23.35■■□□□ 1.33
UBE2F-205ENST00000414443 SPATA5Q8NB90 893 aa23.35■■□□□ 1.33
UBE2F-205ENST00000414443 CDC5LQ99459 802 aaKnown RBP23.35■■□□□ 1.33
UBE2F-205ENST00000414443 FGAP02671 866 aa23.35■■□□□ 1.33
UBE2F-205ENST00000414443 NCLP19338 710 aaKnown RBP23.35■■□□□ 1.33
UBE2F-205ENST00000414443 EXOSC10Q01780 885 aaKnown RBP23.35■■□□□ 1.33
UBE2F-205ENST00000414443 RASGRF1Q13972 1273 aa23.35■■□□□ 1.33
UBE2F-205ENST00000414443 MTMR6Q9Y217 621 aa23.35■■□□□ 1.33
UBE2F-205ENST00000414443 EP400Q96L91 3159 aa23.35■■□□□ 1.33
UBE2F-205ENST00000414443 A0A1B0GUL6 1792 aa23.34■■□□□ 1.33
UBE2F-205ENST00000414443 ATRNO75882 1429 aa23.34■■□□□ 1.33
UBE2F-205ENST00000414443 F13A1P00488 732 aa23.34■■□□□ 1.33
UBE2F-205ENST00000414443 GAS2L3Q86XJ1 694 aa23.34■■□□□ 1.33
UBE2F-205ENST00000414443 BRF1Q92994 677 aa23.34■■□□□ 1.33
UBE2F-205ENST00000414443 CTNNA3Q9UI47 895 aa23.34■■□□□ 1.33
UBE2F-205ENST00000414443 DOCK2Q92608 1830 aa23.34■■□□□ 1.33
UBE2F-205ENST00000414443 UBE3CQ15386 1083 aa23.33■■□□□ 1.33
UBE2F-205ENST00000414443 SLC10A5Q5PT55 438 aa23.33■■□□□ 1.33
UBE2F-205ENST00000414443 COL24A1Q17RW2 1714 aa23.33■■□□□ 1.33
UBE2F-205ENST00000414443 XRCC6P12956 609 aaKnown RBP eCLIP23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms