RNA–Protein interactions for RNA: ENST00000414368.2

LINC00343-201, long intergenic non-protein coding RNA 343, humanhuman

TSL 2

Gene LINC00343, Length 864 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-201ENST00000414368 APBA3O96018 575 aa9.02□□□□□ -0.97
LINC00343-201ENST00000414368 PTK2Q05397 1052 aa9.02□□□□□ -0.97
LINC00343-201ENST00000414368 NR1H3Q13133 447 aa9.02□□□□□ -0.97
LINC00343-201ENST00000414368 DCTN1Q14203 1278 aa9.02□□□□□ -0.97
LINC00343-201ENST00000414368 RC3H1Q5TC82 1133 aaKnown RBP9.02□□□□□ -0.97
LINC00343-201ENST00000414368 DEFB132Q7Z7B7 95 aa9.02□□□□□ -0.97
LINC00343-201ENST00000414368 GAS2L2Q8NHY3 880 aa9.02□□□□□ -0.97
LINC00343-201ENST00000414368 ZFP42Q96MM3 310 aa9.02□□□□□ -0.97
LINC00343-201ENST00000414368 RRP7AQ9Y3A4 280 aaKnown RBP9.02□□□□□ -0.97
LINC00343-201ENST00000414368 BTAF1O14981 1849 aa9.02□□□□□ -0.97
LINC00343-201ENST00000414368 BCL9O00512 1426 aa9.02□□□□□ -0.97
LINC00343-201ENST00000414368 KDM6AO15550 1401 aaPredicted RBP9.02□□□□□ -0.97
LINC00343-201ENST00000414368 MAPK8IP3Q9UPT6 1336 aa9.02□□□□□ -0.97
LINC00343-201ENST00000414368 PLEKHG2Q9H7P9 1386 aa9.01□□□□□ -0.97
LINC00343-201ENST00000414368 GNAT3A8MTJ3 354 aa9.01□□□□□ -0.97
LINC00343-201ENST00000414368 CCER2I3L3R5 266 aa9.01□□□□□ -0.97
LINC00343-201ENST00000414368 RNMTO43148 476 aaKnown RBP9.01□□□□□ -0.97
LINC00343-201ENST00000414368 NEFMP07197 916 aa9.01□□□□□ -0.97
LINC00343-201ENST00000414368 HSP90AB1P08238 724 aaKnown RBP9.01□□□□□ -0.97
LINC00343-201ENST00000414368 FBXO45P0C2W1 286 aa9.01□□□□□ -0.97
LINC00343-201ENST00000414368 SOX11P35716 441 aa9.01□□□□□ -0.97
LINC00343-201ENST00000414368 SEMA3FQ13275 785 aa9.01□□□□□ -0.97
LINC00343-201ENST00000414368 NFE2L2Q16236 605 aa9.01□□□□□ -0.97
LINC00343-201ENST00000414368 HDGFL1Q5TGJ6 251 aa9.01□□□□□ -0.97
LINC00343-201ENST00000414368 PTCRAQ6ISU1 281 aaPredicted RBP9.01□□□□□ -0.97
LINC00343-201ENST00000414368 PDXDC2PQ6P474 469 aa9.01□□□□□ -0.97
LINC00343-201ENST00000414368 IL17REQ8NFR9 667 aa9.01□□□□□ -0.97
LINC00343-201ENST00000414368 PIGBQ92521 554 aa9.01□□□□□ -0.97
LINC00343-201ENST00000414368 RUNDC1Q96C34 613 aa9.01□□□□□ -0.97
LINC00343-201ENST00000414368 DCAF5Q96JK2 942 aa9.01□□□□□ -0.97
LINC00343-201ENST00000414368 PNNQ9H307 717 aaKnown RBP9.01□□□□□ -0.97
LINC00343-201ENST00000414368 MAP3K5Q99683 1374 aa9□□□□□ -0.97
LINC00343-201ENST00000414368 APAF1O14727 1248 aa9□□□□□ -0.97
LINC00343-201ENST00000414368 ADAM23O75077 832 aa9□□□□□ -0.97
LINC00343-201ENST00000414368 IRS1P35568 1242 aa9□□□□□ -0.97
LINC00343-201ENST00000414368 TMPOP42166 694 aaKnown RBP9□□□□□ -0.97
LINC00343-201ENST00000414368 RIPK4P57078 832 aa9□□□□□ -0.97
LINC00343-201ENST00000414368 SF3B2Q13435 895 aaKnown RBP9□□□□□ -0.97
LINC00343-201ENST00000414368 MCM10Q7L590 875 aa9□□□□□ -0.97
LINC00343-201ENST00000414368 NFATC2IPQ8NCF5 419 aa9□□□□□ -0.97
LINC00343-201ENST00000414368 THUMPD2Q9BTF0 503 aaKnown RBP9□□□□□ -0.97
LINC00343-201ENST00000414368 GPSM3Q9Y4H4 160 aa9□□□□□ -0.97
LINC00343-201ENST00000414368 ERVV-2B6SEH9 535 aa8.99□□□□□ -0.97
LINC00343-201ENST00000414368 CABP4P57796 275 aa8.99□□□□□ -0.97
LINC00343-201ENST00000414368 AGERQ15109 404 aa8.99□□□□□ -0.97
LINC00343-201ENST00000414368 CCDC125Q86Z20 511 aa8.99□□□□□ -0.97
LINC00343-201ENST00000414368 ARHGAP9Q9BRR9 750 aa8.99□□□□□ -0.97
LINC00343-201ENST00000414368 TMOD3Q9NYL9 352 aa8.99□□□□□ -0.97
LINC00343-201ENST00000414368 ADAMTS7Q9UKP4 1686 aa8.98□□□□□ -0.97
LINC00343-201ENST00000414368 BAG6P46379 1132 aa8.98□□□□□ -0.97
LINC00343-201ENST00000414368 KCNQ4P56696 695 aa8.98□□□□□ -0.97
LINC00343-201ENST00000414368 EZH2Q15910 746 aaKnown RBP8.98□□□□□ -0.97
LINC00343-201ENST00000414368 LINC01559Q495D7 138 aa8.98□□□□□ -0.97
LINC00343-201ENST00000414368 RTF1Q92541 710 aaKnown RBP8.98□□□□□ -0.97
LINC00343-201ENST00000414368 BAP1Q92560 729 aa8.98□□□□□ -0.97
LINC00343-201ENST00000414368 ZNF592Q92610 1267 aa8.98□□□□□ -0.97
LINC00343-201ENST00000414368 SLC52A2Q9HAB3 445 aa8.98□□□□□ -0.97
LINC00343-201ENST00000414368 ASAP1Q9ULH1 1129 aa8.98□□□□□ -0.97
LINC00343-201ENST00000414368 SIPA1L3O60292 1781 aaPredicted RBP8.97□□□□□ -0.97
LINC00343-201ENST00000414368 SLC39A6Q13433 755 aa8.97□□□□□ -0.97
LINC00343-201ENST00000414368 ZBTB33Q86T24 672 aa8.97□□□□□ -0.97
LINC00343-201ENST00000414368 CAMKK2Q96RR4 588 aa8.97□□□□□ -0.97
LINC00343-201ENST00000414368 ATG3Q9NT62 314 aa8.97□□□□□ -0.97
LINC00343-201ENST00000414368 MIS18AQ9NYP9 233 aa8.97□□□□□ -0.97
LINC00343-201ENST00000414368 MAGEB6P1A0A0J9YX57 407 aa8.96□□□□□ -0.98
LINC00343-201ENST00000414368 PLSCR1O15162 318 aa8.96□□□□□ -0.98
LINC00343-201ENST00000414368 HTATSF1O43719 755 aaKnown RBP8.96□□□□□ -0.98
LINC00343-201ENST00000414368 TEFQ10587 303 aa8.96□□□□□ -0.98
LINC00343-201ENST00000414368 ARXQ96QS3 562 aa8.96□□□□□ -0.98
LINC00343-201ENST00000414368 ALG2Q9H553 416 aa8.96□□□□□ -0.98
LINC00343-201ENST00000414368 PCDHB9Q9Y5E1 797 aa8.96□□□□□ -0.98
LINC00343-201ENST00000414368 LY75O60449 1722 aa8.96□□□□□ -0.98
LINC00343-201ENST00000414368 CEMIPQ8WUJ3 1361 aa8.96□□□□□ -0.98
LINC00343-201ENST00000414368 KCNQ3O43525 872 aa8.95□□□□□ -0.98
LINC00343-201ENST00000414368 TXNRD1Q16881 649 aa8.95□□□□□ -0.98
LINC00343-201ENST00000414368 BPHLQ86WA6 291 aaPredicted RBP8.95□□□□□ -0.98
LINC00343-201ENST00000414368 ZNF511Q8NB15 262 aa8.95□□□□□ -0.98
LINC00343-201ENST00000414368 LRRC4BQ9NT99 713 aa8.95□□□□□ -0.98
LINC00343-201ENST00000414368 MRC1P22897 1456 aa8.95□□□□□ -0.98
LINC00343-201ENST00000414368 BTBD11A6QL63 1104 aa8.94□□□□□ -0.98
LINC00343-201ENST00000414368 PTCD1O75127 700 aaKnown RBP8.94□□□□□ -0.98
LINC00343-201ENST00000414368 WNT7BP56706 349 aa8.94□□□□□ -0.98
LINC00343-201ENST00000414368 TAF7Q15545 349 aaPredicted RBP8.94□□□□□ -0.98
LINC00343-201ENST00000414368 ADAMTS19Q8TE59 1207 aa8.94□□□□□ -0.98
LINC00343-201ENST00000414368 SLC4A9Q96Q91 983 aa8.94□□□□□ -0.98
LINC00343-201ENST00000414368 WASF2Q9Y6W5 498 aa8.94□□□□□ -0.98
LINC00343-201ENST00000414368 PALLDQ8WX93 1383 aa8.94□□□□□ -0.98
LINC00343-201ENST00000414368 LOC102724428A0A0B4J2F2 783 aa8.93□□□□□ -0.98
LINC00343-201ENST00000414368 SIK1P57059 783 aa8.93□□□□□ -0.98
LINC00343-201ENST00000414368 MCCD1P59942 119 aaPredicted RBP8.93□□□□□ -0.98
LINC00343-201ENST00000414368 SKOR1P84550 965 aa8.93□□□□□ -0.98
LINC00343-201ENST00000414368 KANK3Q6NY19 840 aa8.93□□□□□ -0.98
LINC00343-201ENST00000414368 SH3BP5LQ7L8J4 393 aa8.93□□□□□ -0.98
LINC00343-201ENST00000414368 HOMEZQ8IX15 550 aa8.93□□□□□ -0.98
LINC00343-201ENST00000414368 ADAM32Q8TC27 787 aa8.93□□□□□ -0.98
LINC00343-201ENST00000414368 SMARCC1Q92922 1105 aaPredicted RBP8.93□□□□□ -0.98
LINC00343-201ENST00000414368 CCNL1Q9UK58 526 aaPredicted RBP8.93□□□□□ -0.98
LINC00343-201ENST00000414368 LAS1LQ9Y4W2 734 aaKnown RBP8.93□□□□□ -0.98
LINC00343-201ENST00000414368 RREB1Q92766 1687 aa8.93□□□□□ -0.98
LINC00343-201ENST00000414368 NUP188Q5SRE5 1749 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms