RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 BRIP1Q9BX63 1249 aa9.99□□□□□ -0.81
HDAC9-207ENST00000413509 ANKRD2Q9GZV1 360 aa9.99□□□□□ -0.81
HDAC9-207ENST00000413509 STK32BQ9NY57 414 aa9.99□□□□□ -0.81
HDAC9-207ENST00000413509 A0A0D9SFI3 127 aa9.98□□□□□ -0.81
HDAC9-207ENST00000413509 GOLIM4O00461 696 aa9.98□□□□□ -0.81
HDAC9-207ENST00000413509 TAF5LO75529 589 aa9.98□□□□□ -0.81
HDAC9-207ENST00000413509 MMP10P09238 476 aa9.98□□□□□ -0.81
HDAC9-207ENST00000413509 ANAPC15P60006 121 aa9.98□□□□□ -0.81
HDAC9-207ENST00000413509 GORABQ5T7V8 394 aa9.98□□□□□ -0.81
HDAC9-207ENST00000413509 CWC27Q6UX04 472 aaKnown RBP9.98□□□□□ -0.81
HDAC9-207ENST00000413509 C15orf52Q6ZUT6 534 aaKnown RBP9.98□□□□□ -0.81
HDAC9-207ENST00000413509 SNX21Q969T3 373 aa9.98□□□□□ -0.81
HDAC9-207ENST00000413509 FAM227BQ96M60 508 aa9.98□□□□□ -0.81
HDAC9-207ENST00000413509 DNAJC2Q99543 621 aaKnown RBP9.98□□□□□ -0.81
HDAC9-207ENST00000413509 NDUFB9Q9Y6M9 179 aa9.98□□□□□ -0.81
HDAC9-207ENST00000413509 PDS5AQ29RF7 1337 aaKnown RBP9.98□□□□□ -0.81
HDAC9-207ENST00000413509 MYO5AQ9Y4I1 1855 aaKnown RBP9.98□□□□□ -0.81
HDAC9-207ENST00000413509 SNAP23O00161 211 aa9.97□□□□□ -0.81
HDAC9-207ENST00000413509 HSPA4P34932 840 aa9.97□□□□□ -0.81
HDAC9-207ENST00000413509 SF3B2Q13435 895 aaKnown RBP9.97□□□□□ -0.81
HDAC9-207ENST00000413509 ZMYM1Q5SVZ6 1142 aa9.97□□□□□ -0.81
HDAC9-207ENST00000413509 TMC4Q7Z404 712 aa9.97□□□□□ -0.81
HDAC9-207ENST00000413509 FBXO33Q7Z6M2 555 aa9.97□□□□□ -0.81
HDAC9-207ENST00000413509 DEFB132Q7Z7B7 95 aa9.97□□□□□ -0.81
HDAC9-207ENST00000413509 RBM17Q96I25 401 aaKnown RBP9.97□□□□□ -0.81
HDAC9-207ENST00000413509 HELLSQ9NRZ9 838 aa9.97□□□□□ -0.81
HDAC9-207ENST00000413509 CCDC171Q6TFL3 1326 aa9.97□□□□□ -0.81
HDAC9-207ENST00000413509 COL1A1P02452 1464 aaPredicted RBP9.97□□□□□ -0.81
HDAC9-207ENST00000413509 DLEC1Q9Y238 1755 aa9.96□□□□□ -0.81
HDAC9-207ENST00000413509 KIF13BQ9NQT8 1826 aa9.96□□□□□ -0.81
HDAC9-207ENST00000413509 RNF113AO15541 343 aaKnown RBP9.96□□□□□ -0.82
HDAC9-207ENST00000413509 BBOX1O75936 387 aa9.96□□□□□ -0.82
HDAC9-207ENST00000413509 CYP2E1P05181 493 aaPredicted RBP9.96□□□□□ -0.82
HDAC9-207ENST00000413509 ZFYP08048 801 aaPredicted RBP9.96□□□□□ -0.82
HDAC9-207ENST00000413509 SRGNP10124 158 aa9.96□□□□□ -0.82
HDAC9-207ENST00000413509 ZAP70P43403 619 aa9.96□□□□□ -0.82
HDAC9-207ENST00000413509 RASGRF1Q13972 1273 aa9.96□□□□□ -0.82
HDAC9-207ENST00000413509 RABEP1Q15276 862 aa9.96□□□□□ -0.82
HDAC9-207ENST00000413509 TTF1Q15361 905 aaPredicted RBP9.96□□□□□ -0.82
HDAC9-207ENST00000413509 PI16Q6UXB8 463 aa9.96□□□□□ -0.82
HDAC9-207ENST00000413509 ZNF589Q86UQ0 364 aaPredicted RBP9.96□□□□□ -0.82
HDAC9-207ENST00000413509 IL27Q8NEV9 243 aa9.96□□□□□ -0.82
HDAC9-207ENST00000413509 RPGRQ92834 1020 aaKnown RBP9.96□□□□□ -0.82
HDAC9-207ENST00000413509 MAP4K1Q92918 833 aa9.96□□□□□ -0.82
HDAC9-207ENST00000413509 ANTXR1Q9H6X2 564 aa9.96□□□□□ -0.82
HDAC9-207ENST00000413509 ANO2Q9NQ90 1003 aa9.96□□□□□ -0.82
HDAC9-207ENST00000413509 PODXL2Q9NZ53 605 aa9.96□□□□□ -0.82
HDAC9-207ENST00000413509 HMG20BQ9P0W2 317 aa9.96□□□□□ -0.82
HDAC9-207ENST00000413509 C10orf71Q711Q0 1435 aa9.96□□□□□ -0.82
HDAC9-207ENST00000413509 MYH13Q9UKX3 1938 aa9.95□□□□□ -0.82
HDAC9-207ENST00000413509 SEMA3EO15041 775 aa9.95□□□□□ -0.82
HDAC9-207ENST00000413509 NPHP1O15259 732 aa9.95□□□□□ -0.82
HDAC9-207ENST00000413509 NPR1P16066 1061 aa9.95□□□□□ -0.82
HDAC9-207ENST00000413509 BCAMP50895 628 aa9.95□□□□□ -0.82
HDAC9-207ENST00000413509 PTH1RQ03431 593 aa9.95□□□□□ -0.82
HDAC9-207ENST00000413509 LRRFIP1Q32MZ4 808 aaKnown RBP9.95□□□□□ -0.82
HDAC9-207ENST00000413509 SPATA5Q8NB90 893 aa9.95□□□□□ -0.82
HDAC9-207ENST00000413509 FAM84BQ96KN1 310 aaPredicted RBP9.95□□□□□ -0.82
HDAC9-207ENST00000413509 TBC1D2Q9BYX2 928 aa9.95□□□□□ -0.82
HDAC9-207ENST00000413509 PIH1D3Q9NQM4 214 aaKnown RBP9.95□□□□□ -0.82
HDAC9-207ENST00000413509 PALD1Q9ULE6 856 aa9.95□□□□□ -0.82
HDAC9-207ENST00000413509 LEMD3Q9Y2U8 911 aa9.95□□□□□ -0.82
HDAC9-207ENST00000413509 PARP3Q9Y6F1 533 aa9.95□□□□□ -0.82
HDAC9-207ENST00000413509 XDHP47989 1333 aa9.95□□□□□ -0.82
HDAC9-207ENST00000413509 DUOX1Q9NRD9 1551 aa9.95□□□□□ -0.82
HDAC9-207ENST00000413509 CACNA1SQ13698 1873 aa9.94□□□□□ -0.82
HDAC9-207ENST00000413509 MAST2Q6P0Q8 1798 aa9.94□□□□□ -0.82
HDAC9-207ENST00000413509 KIAA1551Q9HCM1 1747 aa9.94□□□□□ -0.82
HDAC9-207ENST00000413509 TCRBV5S4A2TA0A5A2 114 aa9.94□□□□□ -0.82
HDAC9-207ENST00000413509 WTIPA6NIX2 430 aaPredicted RBP9.94□□□□□ -0.82
HDAC9-207ENST00000413509 CHGBP05060 677 aa9.94□□□□□ -0.82
HDAC9-207ENST00000413509 MCCP23508 829 aa9.94□□□□□ -0.82
HDAC9-207ENST00000413509 PDE6BP35913 854 aa9.94□□□□□ -0.82
HDAC9-207ENST00000413509 FKBP4Q02790 459 aaKnown RBP eCLIP9.94□□□□□ -0.82
HDAC9-207ENST00000413509 BECN1Q14457 450 aa9.94□□□□□ -0.82
HDAC9-207ENST00000413509 NECTIN1Q15223 517 aa9.94□□□□□ -0.82
HDAC9-207ENST00000413509 UBE3CQ15386 1083 aa9.94□□□□□ -0.82
HDAC9-207ENST00000413509 MCMDC2Q4G0Z9 681 aa9.94□□□□□ -0.82
HDAC9-207ENST00000413509 KIAA1211Q6ZU35 1233 aa9.94□□□□□ -0.82
HDAC9-207ENST00000413509 SLC16A10Q8TF71 515 aa9.94□□□□□ -0.82
HDAC9-207ENST00000413509 SNED1Q8TER0 1413 aa9.93□□□□□ -0.82
HDAC9-207ENST00000413509 MAST3O60307 1309 aa9.93□□□□□ -0.82
HDAC9-207ENST00000413509 KLRK1P26718 216 aa9.93□□□□□ -0.82
HDAC9-207ENST00000413509 ADD2P35612 726 aa9.93□□□□□ -0.82
HDAC9-207ENST00000413509 TSGA10IPQ3SY00 556 aa9.93□□□□□ -0.82
HDAC9-207ENST00000413509 MSL1Q68DK7 614 aa9.93□□□□□ -0.82
HDAC9-207ENST00000413509 ZSCAN25Q6NSZ9 544 aa9.93□□□□□ -0.82
HDAC9-207ENST00000413509 SLC51AQ86UW1 340 aa9.93□□□□□ -0.82
HDAC9-207ENST00000413509 SP8Q8IXZ3 490 aa9.93□□□□□ -0.82
HDAC9-207ENST00000413509 APPBP2Q92624 585 aa9.93□□□□□ -0.82
HDAC9-207ENST00000413509 OSBP2Q969R2 916 aa9.93□□□□□ -0.82
HDAC9-207ENST00000413509 GNL3LQ9NVN8 582 aaKnown RBP9.93□□□□□ -0.82
HDAC9-207ENST00000413509 ATP6V0A2Q9Y487 856 aa9.93□□□□□ -0.82
HDAC9-207ENST00000413509 RPAP1Q9BWH6 1393 aaPredicted RBP9.92□□□□□ -0.82
HDAC9-207ENST00000413509 M0R2C6 588 aa9.92□□□□□ -0.82
HDAC9-207ENST00000413509 FOXP2O15409 715 aa9.92□□□□□ -0.82
HDAC9-207ENST00000413509 IGSF3O75054 1194 aa9.92□□□□□ -0.82
HDAC9-207ENST00000413509 CD2BP2O95400 341 aaKnown RBP9.92□□□□□ -0.82
HDAC9-207ENST00000413509 PDE6AP16499 860 aa9.92□□□□□ -0.82
HDAC9-207ENST00000413509 ATP2B4P23634 1241 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms