RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 ATL3Q6DD88 541 aa22.3■■□□□ 1.16
TNFRSF8-202ENST00000413146 CWC25Q9NXE8 425 aaPredicted RBP22.3■■□□□ 1.16
TNFRSF8-202ENST00000413146 TIMM10P62072 90 aa22.29■■□□□ 1.16
TNFRSF8-202ENST00000413146 PKNOX2Q96KN3 472 aa22.29■■□□□ 1.16
TNFRSF8-202ENST00000413146 FTOQ9C0B1 505 aaKnown RBP eCLIP22.29■■□□□ 1.16
TNFRSF8-202ENST00000413146 HSPD1P10809 573 aaKnown RBP22.28■■□□□ 1.16
TNFRSF8-202ENST00000413146 SPEF2Q9C093 1822 aa22.28■■□□□ 1.16
TNFRSF8-202ENST00000413146 KINO60870 393 aaKnown RBP22.28■■□□□ 1.16
TNFRSF8-202ENST00000413146 CHMP4CQ96CF2 233 aa22.28■■□□□ 1.16
TNFRSF8-202ENST00000413146 USP28Q96RU2 1077 aa22.28■■□□□ 1.16
TNFRSF8-202ENST00000413146 TJP1Q07157 1748 aa22.28■■□□□ 1.16
TNFRSF8-202ENST00000413146 NUP188Q5SRE5 1749 aa22.28■■□□□ 1.16
TNFRSF8-202ENST00000413146 PARP4Q9UKK3 1724 aaKnown RBP22.28■■□□□ 1.16
TNFRSF8-202ENST00000413146 MAST3O60307 1309 aa22.28■■□□□ 1.16
TNFRSF8-202ENST00000413146 IFIT1P09914 478 aaKnown RBP22.27■■□□□ 1.16
TNFRSF8-202ENST00000413146 IQCB1Q15051 598 aa22.27■■□□□ 1.16
TNFRSF8-202ENST00000413146 SARM1Q6SZW1 724 aa22.27■■□□□ 1.16
TNFRSF8-202ENST00000413146 C11orf57Q6ZUT1 292 aaPredicted RBP22.27■■□□□ 1.16
TNFRSF8-202ENST00000413146 GOLPH3LQ9H4A5 285 aa22.27■■□□□ 1.16
TNFRSF8-202ENST00000413146 NCOA5Q9HCD5 579 aaKnown RBP22.27■■□□□ 1.16
TNFRSF8-202ENST00000413146 SALL1Q9NSC2 1324 aa22.27■■□□□ 1.16
TNFRSF8-202ENST00000413146 C16orf45Q96MC5 204 aaPredicted RBP22.27■■□□□ 1.16
TNFRSF8-202ENST00000413146 RNF113AO15541 343 aaKnown RBP22.26■■□□□ 1.15
TNFRSF8-202ENST00000413146 CHRNA2Q15822 529 aa22.26■■□□□ 1.15
TNFRSF8-202ENST00000413146 ZNF274Q96GC6 653 aaPredicted RBP22.26■■□□□ 1.15
TNFRSF8-202ENST00000413146 NBPF26B4DH59 902 aa22.26■■□□□ 1.15
TNFRSF8-202ENST00000413146 FAM160A1Q05DH4 1040 aa22.26■■□□□ 1.15
TNFRSF8-202ENST00000413146 NBPF14Q5TI25 921 aa22.26■■□□□ 1.15
TNFRSF8-202ENST00000413146 NBPF10Q6P3W6 841 aaKnown RBP22.26■■□□□ 1.15
TNFRSF8-202ENST00000413146 SMAP1Q8IYB5 467 aaPredicted RBP22.26■■□□□ 1.15
TNFRSF8-202ENST00000413146 NBPF15Q8N660 670 aa22.26■■□□□ 1.15
TNFRSF8-202ENST00000413146 STRCQ7RTU9 1775 aa22.25■■□□□ 1.15
TNFRSF8-202ENST00000413146 BECN2A8MW95 431 aa22.25■■□□□ 1.15
TNFRSF8-202ENST00000413146 EYA2O00167 538 aa22.25■■□□□ 1.15
TNFRSF8-202ENST00000413146 PDIA3P30101 505 aaKnown RBP22.25■■□□□ 1.15
TNFRSF8-202ENST00000413146 ME1P48163 572 aa22.25■■□□□ 1.15
TNFRSF8-202ENST00000413146 CACTINQ8WUQ7 758 aaKnown RBP22.25■■□□□ 1.15
TNFRSF8-202ENST00000413146 STRCP1A6NGW2 1772 aa22.25■■□□□ 1.15
TNFRSF8-202ENST00000413146 A0A0G2JLW4 131 aa22.25■■□□□ 1.15
TNFRSF8-202ENST00000413146 CTIFO43310 598 aaKnown RBP22.25■■□□□ 1.15
TNFRSF8-202ENST00000413146 GUCY1B3Q02153 619 aa22.25■■□□□ 1.15
TNFRSF8-202ENST00000413146 SNW1Q13573 536 aaKnown RBP22.25■■□□□ 1.15
TNFRSF8-202ENST00000413146 CABLES1Q8TDN4 633 aa22.25■■□□□ 1.15
TNFRSF8-202ENST00000413146 CARMIL3Q8ND23 1372 aa22.25■■□□□ 1.15
TNFRSF8-202ENST00000413146 A0A1B0GUL7 405 aa22.24■■□□□ 1.15
TNFRSF8-202ENST00000413146 CCDC144BQ3MJ40 725 aa22.24■■□□□ 1.15
TNFRSF8-202ENST00000413146 LRRC24Q50LG9 513 aa22.24■■□□□ 1.15
TNFRSF8-202ENST00000413146 TTLL7Q6ZT98 887 aa22.24■■□□□ 1.15
TNFRSF8-202ENST00000413146 CHST3Q7LGC8 479 aa22.24■■□□□ 1.15
TNFRSF8-202ENST00000413146 CCDC144CPQ8IYA2 1237 aa22.24■■□□□ 1.15
TNFRSF8-202ENST00000413146 FSIP1Q8NA03 581 aa22.24■■□□□ 1.15
TNFRSF8-202ENST00000413146 DDX17Q92841 729 aaKnown RBP22.24■■□□□ 1.15
TNFRSF8-202ENST00000413146 MRFAP1L1Q96HT8 127 aa22.24■■□□□ 1.15
TNFRSF8-202ENST00000413146 PDCL2Q8N4E4 241 aa22.24■■□□□ 1.15
TNFRSF8-202ENST00000413146 ANO10Q9NW15 660 aa22.24■■□□□ 1.15
TNFRSF8-202ENST00000413146 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.23■■□□□ 1.15
TNFRSF8-202ENST00000413146 TNNT1P13805 278 aa22.23■■□□□ 1.15
TNFRSF8-202ENST00000413146 ATF3P18847 181 aa22.23■■□□□ 1.15
TNFRSF8-202ENST00000413146 ZNF594Q96JF6 807 aaPredicted RBP22.23■■□□□ 1.15
TNFRSF8-202ENST00000413146 SMTNL1A8MU46 457 aa22.23■■□□□ 1.15
TNFRSF8-202ENST00000413146 PPFIA3O75145 1194 aa22.23■■□□□ 1.15
TNFRSF8-202ENST00000413146 PPP4R3BQ5MIZ7 849 aa22.23■■□□□ 1.15
TNFRSF8-202ENST00000413146 ENGASEQ8NFI3 743 aa22.23■■□□□ 1.15
TNFRSF8-202ENST00000413146 M0R2C6 588 aa22.22■■□□□ 1.15
TNFRSF8-202ENST00000413146 CIAO1O76071 339 aa22.22■■□□□ 1.15
TNFRSF8-202ENST00000413146 TPD52L1Q16890 204 aaPredicted RBP22.22■■□□□ 1.15
TNFRSF8-202ENST00000413146 CCDC191Q8NCU4 936 aa22.22■■□□□ 1.15
TNFRSF8-202ENST00000413146 ANKRD7Q92527 254 aa22.22■■□□□ 1.15
TNFRSF8-202ENST00000413146 TMEM94Q12767 1356 aa22.22■■□□□ 1.15
TNFRSF8-202ENST00000413146 NEMFO60524 1076 aa22.21■■□□□ 1.15
TNFRSF8-202ENST00000413146 LRRFIP1Q32MZ4 808 aaKnown RBP22.21■■□□□ 1.15
TNFRSF8-202ENST00000413146 ILDR1Q86SU0 546 aaPredicted RBP22.21■■□□□ 1.15
TNFRSF8-202ENST00000413146 LRRC8AQ8IWT6 810 aa22.21■■□□□ 1.15
TNFRSF8-202ENST00000413146 CEP57L1Q8IYX8 460 aa22.21■■□□□ 1.15
TNFRSF8-202ENST00000413146 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.21■■□□□ 1.15
TNFRSF8-202ENST00000413146 ZBTB3Q9H5J0 574 aa22.21■■□□□ 1.15
TNFRSF8-202ENST00000413146 ATG3Q9NT62 314 aa22.21■■□□□ 1.15
TNFRSF8-202ENST00000413146 TTLL5Q6EMB2 1281 aa22.2■■□□□ 1.15
TNFRSF8-202ENST00000413146 MRPS27Q92552 414 aaKnown RBP22.2■■□□□ 1.15
TNFRSF8-202ENST00000413146 CTNNA3Q9UI47 895 aa22.2■■□□□ 1.15
TNFRSF8-202ENST00000413146 UBR2Q8IWV8 1755 aa22.2■■□□□ 1.14
TNFRSF8-202ENST00000413146 FKBP4Q02790 459 aaKnown RBP eCLIP22.2■■□□□ 1.14
TNFRSF8-202ENST00000413146 PAXBP1Q9Y5B6 917 aa22.2■■□□□ 1.14
TNFRSF8-202ENST00000413146 TNS3Q68CZ2 1445 aa22.2■■□□□ 1.14
TNFRSF8-202ENST00000413146 DHX40Q8IX18 779 aaKnown RBP22.19■■□□□ 1.14
TNFRSF8-202ENST00000413146 FBXL16Q8N461 479 aa22.19■■□□□ 1.14
TNFRSF8-202ENST00000413146 NAT10Q9H0A0 1025 aaKnown RBP22.19■■□□□ 1.14
TNFRSF8-202ENST00000413146 CEP126Q9P2H0 1117 aa22.19■■□□□ 1.14
TNFRSF8-202ENST00000413146 OSBP2Q969R2 916 aa22.19■■□□□ 1.14
TNFRSF8-202ENST00000413146 RTEL1Q9NZ71 1219 aa22.19■■□□□ 1.14
TNFRSF8-202ENST00000413146 A1BGP04217 495 aa22.18■■□□□ 1.14
TNFRSF8-202ENST00000413146 FDPSP14324 419 aaKnown RBP22.18■■□□□ 1.14
TNFRSF8-202ENST00000413146 IMMTQ16891 758 aaKnown RBP22.18■■□□□ 1.14
TNFRSF8-202ENST00000413146 CCDC158Q5M9N0 1113 aa22.18■■□□□ 1.14
TNFRSF8-202ENST00000413146 GORABQ5T7V8 394 aa22.18■■□□□ 1.14
TNFRSF8-202ENST00000413146 PCDHA7Q9UN72 937 aa22.18■■□□□ 1.14
TNFRSF8-202ENST00000413146 EVCP57679 992 aa22.18■■□□□ 1.14
TNFRSF8-202ENST00000413146 WASHC4Q2M389 1173 aa22.18■■□□□ 1.14
TNFRSF8-202ENST00000413146 TTC39AQ5SRH9 613 aa22.18■■□□□ 1.14
TNFRSF8-202ENST00000413146 ADALQ6DHV7 355 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms