RNA–Protein interactions for RNA: ENST00000412770.6

PPP6R1-201, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP6R1, Length 3,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-201ENST00000412770 CREB3L3Q68CJ9 461 aa19.53■□□□□ 0.72
PPP6R1-201ENST00000412770 HIBADHP31937 336 aaKnown RBP19.53■□□□□ 0.72
PPP6R1-201ENST00000412770 MIGA1Q8NAN2 632 aa19.53■□□□□ 0.72
PPP6R1-201ENST00000412770 ANTXR1Q9H6X2 564 aa19.53■□□□□ 0.72
PPP6R1-201ENST00000412770 MRC1P22897 1456 aa19.53■□□□□ 0.72
PPP6R1-201ENST00000412770 RIMBP2O15034 1052 aa19.53■□□□□ 0.72
PPP6R1-201ENST00000412770 CSF1RP07333 972 aa19.53■□□□□ 0.72
PPP6R1-201ENST00000412770 NTSR2O95665 410 aa19.52■□□□□ 0.72
PPP6R1-201ENST00000412770 CPA1P15085 419 aa19.52■□□□□ 0.72
PPP6R1-201ENST00000412770 SPATA5Q8NB90 893 aa19.52■□□□□ 0.72
PPP6R1-201ENST00000412770 MCTP1Q6DN14 999 aa19.52■□□□□ 0.72
PPP6R1-201ENST00000412770 EN1Q05925 392 aaPredicted RBP19.52■□□□□ 0.72
PPP6R1-201ENST00000412770 HMG20BQ9P0W2 317 aa19.52■□□□□ 0.72
PPP6R1-201ENST00000412770 NAA16Q6N069 864 aaPredicted RBP19.51■□□□□ 0.71
PPP6R1-201ENST00000412770 CCDC83Q8IWF9 413 aa19.51■□□□□ 0.71
PPP6R1-201ENST00000412770 NEK1Q96PY6 1258 aa19.51■□□□□ 0.71
PPP6R1-201ENST00000412770 PTH1RQ03431 593 aa19.51■□□□□ 0.71
PPP6R1-201ENST00000412770 CELF1Q92879 486 aaKnown RBP19.51■□□□□ 0.71
PPP6R1-201ENST00000412770 CHMP4CQ96CF2 233 aa19.51■□□□□ 0.71
PPP6R1-201ENST00000412770 ZC3H12CQ9C0D7 883 aaKnown RBP19.51■□□□□ 0.71
PPP6R1-201ENST00000412770 COL16A1Q07092 1604 aaPredicted RBP19.51■□□□□ 0.71
PPP6R1-201ENST00000412770 SART3Q15020 963 aaKnown RBP19.51■□□□□ 0.71
PPP6R1-201ENST00000412770 RBM5P52756 815 aaKnown RBP eCLIP19.51■□□□□ 0.71
PPP6R1-201ENST00000412770 ZNF804AQ7Z570 1209 aa19.51■□□□□ 0.71
PPP6R1-201ENST00000412770 HELLSQ9NRZ9 838 aa19.51■□□□□ 0.71
PPP6R1-201ENST00000412770 PALD1Q9ULE6 856 aa19.51■□□□□ 0.71
PPP6R1-201ENST00000412770 LIMCH1Q9UPQ0 1083 aa19.51■□□□□ 0.71
PPP6R1-201ENST00000412770 CACNA1FO60840 1977 aa19.5■□□□□ 0.71
PPP6R1-201ENST00000412770 APPBP2Q92624 585 aa19.5■□□□□ 0.71
PPP6R1-201ENST00000412770 LRRC2Q9BYS8 371 aa19.5■□□□□ 0.71
PPP6R1-201ENST00000412770 KDM4AO75164 1064 aa19.5■□□□□ 0.71
PPP6R1-201ENST00000412770 MMP10P09238 476 aa19.5■□□□□ 0.71
PPP6R1-201ENST00000412770 SSFA2P28290 1259 aa19.5■□□□□ 0.71
PPP6R1-201ENST00000412770 LRRC37A3O60309 1634 aa19.5■□□□□ 0.71
PPP6R1-201ENST00000412770 SNX21Q969T3 373 aa19.5■□□□□ 0.71
PPP6R1-201ENST00000412770 USP5P45974 858 aa19.49■□□□□ 0.71
PPP6R1-201ENST00000412770 ZSCAN31Q96LW9 406 aaPredicted RBP19.49■□□□□ 0.71
PPP6R1-201ENST00000412770 GGA1Q9UJY5 639 aa19.49■□□□□ 0.71
PPP6R1-201ENST00000412770 DENND2AQ9ULE3 1009 aa19.49■□□□□ 0.71
PPP6R1-201ENST00000412770 MTMR7Q9Y216 660 aa19.49■□□□□ 0.71
PPP6R1-201ENST00000412770 RIPOR2Q9Y4F9 1068 aa19.49■□□□□ 0.71
PPP6R1-201ENST00000412770 TMX3Q96JJ7 454 aa19.49■□□□□ 0.71
PPP6R1-201ENST00000412770 CWC22Q9HCG8 908 aaKnown RBP19.49■□□□□ 0.71
PPP6R1-201ENST00000412770 DDX11L8A8MPP1 907 aa19.49■□□□□ 0.71
PPP6R1-201ENST00000412770 SLC4A4Q9Y6R1 1079 aa19.49■□□□□ 0.71
PPP6R1-201ENST00000412770 SLC3A2P08195 630 aaKnown RBP19.48■□□□□ 0.71
PPP6R1-201ENST00000412770 SPTY2D1Q68D10 685 aaPredicted RBP19.48■□□□□ 0.71
PPP6R1-201ENST00000412770 SNX14Q9Y5W7 946 aa19.48■□□□□ 0.71
PPP6R1-201ENST00000412770 SCN11AQ9UI33 1791 aa19.48■□□□□ 0.71
PPP6R1-201ENST00000412770 GPAA1O43292 621 aa19.48■□□□□ 0.71
PPP6R1-201ENST00000412770 MBD4O95243 580 aa19.48■□□□□ 0.71
PPP6R1-201ENST00000412770 ANP32BQ92688 251 aaKnown RBP19.48■□□□□ 0.71
PPP6R1-201ENST00000412770 CARMIL3Q8ND23 1372 aa19.48■□□□□ 0.71
PPP6R1-201ENST00000412770 UBE4AQ14139 1066 aa19.48■□□□□ 0.71
PPP6R1-201ENST00000412770 USP42Q9H9J4 1324 aaKnown RBP19.48■□□□□ 0.71
PPP6R1-201ENST00000412770 TRIM34Q9BYJ4 488 aa19.47■□□□□ 0.71
PPP6R1-201ENST00000412770 HSPA4P34932 840 aa19.47■□□□□ 0.71
PPP6R1-201ENST00000412770 AKAP17AQ02040 695 aaKnown RBP19.47■□□□□ 0.71
PPP6R1-201ENST00000412770 SLC4A8Q2Y0W8 1093 aa19.47■□□□□ 0.71
PPP6R1-201ENST00000412770 ATP6V1DQ9Y5K8 247 aa19.47■□□□□ 0.71
PPP6R1-201ENST00000412770 ZNF532Q9HCE3 1301 aa19.47■□□□□ 0.71
PPP6R1-201ENST00000412770 F8W031 263 aaPredicted RBP19.47■□□□□ 0.71
PPP6R1-201ENST00000412770 H0YIN7 160 aa19.47■□□□□ 0.71
PPP6R1-201ENST00000412770 SLC27A2O14975 620 aa19.46■□□□□ 0.71
PPP6R1-201ENST00000412770 BSDC1Q9NW68 430 aaPredicted RBP19.46■□□□□ 0.71
PPP6R1-201ENST00000412770 RAD21O60216 631 aa19.46■□□□□ 0.71
PPP6R1-201ENST00000412770 HMGB1P09429 215 aaKnown RBP19.46■□□□□ 0.71
PPP6R1-201ENST00000412770 SLFNL1Q499Z3 407 aa19.46■□□□□ 0.71
PPP6R1-201ENST00000412770 ZNF589Q86UQ0 364 aaPredicted RBP19.46■□□□□ 0.71
PPP6R1-201ENST00000412770 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.46■□□□□ 0.71
PPP6R1-201ENST00000412770 ZNF804BA4D1E1 1349 aa19.45■□□□□ 0.7
PPP6R1-201ENST00000412770 DDX49Q9Y6V7 483 aaKnown RBP19.45■□□□□ 0.7
PPP6R1-201ENST00000412770 LRRC4BQ9NT99 713 aa19.45■□□□□ 0.7
PPP6R1-201ENST00000412770 CIZ1Q9ULV3 898 aaPredicted RBP19.45■□□□□ 0.7
PPP6R1-201ENST00000412770 KDM3BQ7LBC6 1761 aa19.45■□□□□ 0.7
PPP6R1-201ENST00000412770 LDHCP07864 332 aa19.45■□□□□ 0.7
PPP6R1-201ENST00000412770 BRF1Q92994 677 aa19.45■□□□□ 0.7
PPP6R1-201ENST00000412770 UBAC1Q9BSL1 405 aa19.45■□□□□ 0.7
PPP6R1-201ENST00000412770 LSG1Q9H089 658 aaKnown RBP19.45■□□□□ 0.7
PPP6R1-201ENST00000412770 ARMT1Q9H993 441 aa19.45■□□□□ 0.7
PPP6R1-201ENST00000412770 MAGEB6P1A0A0J9YX57 407 aa19.44■□□□□ 0.7
PPP6R1-201ENST00000412770 PDE6BP35913 854 aa19.44■□□□□ 0.7
PPP6R1-201ENST00000412770 ILDR1Q86SU0 546 aaPredicted RBP19.44■□□□□ 0.7
PPP6R1-201ENST00000412770 DDX11Q96FC9 970 aa19.44■□□□□ 0.7
PPP6R1-201ENST00000412770 MINPP1Q9UNW1 487 aa19.44■□□□□ 0.7
PPP6R1-201ENST00000412770 LRP6O75581 1613 aa19.44■□□□□ 0.7
PPP6R1-201ENST00000412770 PTMSP20962 102 aa19.44■□□□□ 0.7
PPP6R1-201ENST00000412770 AK2P54819 239 aa19.44■□□□□ 0.7
PPP6R1-201ENST00000412770 CHST3Q7LGC8 479 aa19.44■□□□□ 0.7
PPP6R1-201ENST00000412770 ZGPATQ8N5A5 531 aaKnown RBP19.44■□□□□ 0.7
PPP6R1-201ENST00000412770 NECAB1Q8N987 351 aa19.44■□□□□ 0.7
PPP6R1-201ENST00000412770 KCPQ6ZWJ8 1503 aa19.44■□□□□ 0.7
PPP6R1-201ENST00000412770 PDE6AP16499 860 aa19.44■□□□□ 0.7
PPP6R1-201ENST00000412770 MCAMP43121 646 aa19.44■□□□□ 0.7
PPP6R1-201ENST00000412770 LDHBP07195 334 aaKnown RBP19.43■□□□□ 0.7
PPP6R1-201ENST00000412770 GRAPQ13588 217 aa19.43■□□□□ 0.7
PPP6R1-201ENST00000412770 DPP8Q6V1X1 898 aaPredicted RBP19.43■□□□□ 0.7
PPP6R1-201ENST00000412770 GRAPLQ8TC17 118 aaPredicted RBP19.43■□□□□ 0.7
PPP6R1-201ENST00000412770 SCARF1Q14162 830 aa19.43■□□□□ 0.7
PPP6R1-201ENST00000412770 SF3B3Q15393 1217 aaKnown RBP19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 380.1 ms