RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 DDX11Q96FC9 970 aa13.55□□□□□ -0.24
TRAFD1-202ENST00000412615 OFD1O75665 1012 aa13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 CYP19A1P11511 503 aaPredicted RBP13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 APOBRQ0VD83 1088 aa13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 RESTQ13127 1097 aa13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 METTL24Q5JXM2 366 aa13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 LDHAL6AQ6ZMR3 332 aa13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 TTLL11Q8NHH1 800 aa13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 NUP62CLQ9H1M0 184 aa13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 CFAP45Q9UL16 551 aa13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 ANKRD18BA2A2Z9 1011 aa13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 EXOC5O00471 708 aa13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 GPTP24298 496 aa13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 ATP2B3Q16720 1220 aa13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 NAA16Q6N069 864 aaPredicted RBP13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 NSUN7Q8NE18 718 aaKnown RBP13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 ZNF274Q96GC6 653 aaPredicted RBP13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 USP25Q9UHP3 1055 aa13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 RIPOR2Q9Y4F9 1068 aa13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 BCL9O00512 1426 aa13.54□□□□□ -0.24
TRAFD1-202ENST00000412615 ITGA6P23229 1130 aa13.53□□□□□ -0.24
TRAFD1-202ENST00000412615 IMMTQ16891 758 aaKnown RBP13.53□□□□□ -0.24
TRAFD1-202ENST00000412615 FBXL16Q8N461 479 aa13.53□□□□□ -0.24
TRAFD1-202ENST00000412615 APPBP2Q92624 585 aa13.53□□□□□ -0.24
TRAFD1-202ENST00000412615 DISP2A7MBM2 1401 aa13.53□□□□□ -0.24
TRAFD1-202ENST00000412615 KDM4AO75164 1064 aa13.53□□□□□ -0.24
TRAFD1-202ENST00000412615 LIG1P18858 919 aa13.53□□□□□ -0.24
TRAFD1-202ENST00000412615 ZAP70P43403 619 aa13.53□□□□□ -0.24
TRAFD1-202ENST00000412615 CTSWP56202 376 aa13.53□□□□□ -0.24
TRAFD1-202ENST00000412615 MAP3K11Q16584 847 aa13.53□□□□□ -0.24
TRAFD1-202ENST00000412615 DDX19AQ9NUU7 478 aaKnown RBP13.53□□□□□ -0.24
TRAFD1-202ENST00000412615 SCARF1Q14162 830 aa13.52□□□□□ -0.24
TRAFD1-202ENST00000412615 TTLL5Q6EMB2 1281 aa13.52□□□□□ -0.24
TRAFD1-202ENST00000412615 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.52□□□□□ -0.248e-7■■■■■ 37.5
TRAFD1-202ENST00000412615 GREM2Q9H772 168 aa13.52□□□□□ -0.24
TRAFD1-202ENST00000412615 CNNM1Q9NRU3 951 aa13.52□□□□□ -0.24
TRAFD1-202ENST00000412615 TRMT112Q9UI30 125 aaKnown RBP13.52□□□□□ -0.24
TRAFD1-202ENST00000412615 KDM4FA0A1W2PPD8 638 aa13.52□□□□□ -0.25
TRAFD1-202ENST00000412615 PTPDC1A2A3K4 754 aa13.52□□□□□ -0.25
TRAFD1-202ENST00000412615 ERVV-1B6SEH8 477 aa13.52□□□□□ -0.25
TRAFD1-202ENST00000412615 IRS4O14654 1257 aaPredicted RBP13.52□□□□□ -0.25
TRAFD1-202ENST00000412615 ADCY5O95622 1261 aa13.52□□□□□ -0.25
TRAFD1-202ENST00000412615 PDIA3P30101 505 aaKnown RBP13.52□□□□□ -0.25
TRAFD1-202ENST00000412615 ZSCAN25Q6NSZ9 544 aa13.52□□□□□ -0.25
TRAFD1-202ENST00000412615 SYNE4Q8N205 404 aa13.52□□□□□ -0.25
TRAFD1-202ENST00000412615 ZNF512BQ96KM6 892 aaPredicted RBP13.52□□□□□ -0.25
TRAFD1-202ENST00000412615 SLC4A9Q96Q91 983 aa13.52□□□□□ -0.25
TRAFD1-202ENST00000412615 A0A0G2JLW4 131 aa13.51□□□□□ -0.25
TRAFD1-202ENST00000412615 CTDNEP1O95476 244 aa13.51□□□□□ -0.25
TRAFD1-202ENST00000412615 CCT2P78371 535 aaKnown RBP13.51□□□□□ -0.25
TRAFD1-202ENST00000412615 TNMDQ9H2S6 317 aa13.51□□□□□ -0.25
TRAFD1-202ENST00000412615 DACT1Q9NYF0 836 aa13.51□□□□□ -0.25
TRAFD1-202ENST00000412615 ZBTB1Q9Y2K1 713 aa13.51□□□□□ -0.25
TRAFD1-202ENST00000412615 PDE8AO60658 829 aa13.51□□□□□ -0.25
TRAFD1-202ENST00000412615 FGAP02671 866 aa13.51□□□□□ -0.25
TRAFD1-202ENST00000412615 IL6STP40189 918 aaPredicted RBP13.51□□□□□ -0.25
TRAFD1-202ENST00000412615 EVCP57679 992 aa13.51□□□□□ -0.25
TRAFD1-202ENST00000412615 SYTL4Q96C24 671 aaPredicted RBP13.51□□□□□ -0.25
TRAFD1-202ENST00000412615 NAP1L2Q9ULW6 460 aaPredicted RBP13.51□□□□□ -0.25
TRAFD1-202ENST00000412615 RIC1Q4ADV7 1423 aa13.51□□□□□ -0.25
TRAFD1-202ENST00000412615 TTF1Q15361 905 aaPredicted RBP13.5□□□□□ -0.25
TRAFD1-202ENST00000412615 BICD2Q8TD16 824 aa13.5□□□□□ -0.25
TRAFD1-202ENST00000412615 ITGB4P16144 1822 aa13.5□□□□□ -0.25
TRAFD1-202ENST00000412615 CAMK4Q16566 473 aa13.5□□□□□ -0.25
TRAFD1-202ENST00000412615 ATL3Q6DD88 541 aa13.5□□□□□ -0.25
TRAFD1-202ENST00000412615 CHST3Q7LGC8 479 aa13.5□□□□□ -0.25
TRAFD1-202ENST00000412615 DZIP3Q86Y13 1208 aaKnown RBP13.5□□□□□ -0.25
TRAFD1-202ENST00000412615 PGBD1Q96JS3 809 aa13.5□□□□□ -0.25
TRAFD1-202ENST00000412615 PUS7LQ9H0K6 701 aaKnown RBP13.5□□□□□ -0.25
TRAFD1-202ENST00000412615 LAMA4Q16363 1823 aa13.5□□□□□ -0.25
TRAFD1-202ENST00000412615 ZNF213O14771 459 aa13.49□□□□□ -0.25
TRAFD1-202ENST00000412615 FOXP2O15409 715 aa13.49□□□□□ -0.25
TRAFD1-202ENST00000412615 PDE8BO95263 885 aa13.49□□□□□ -0.25
TRAFD1-202ENST00000412615 SALL1Q9NSC2 1324 aa13.49□□□□□ -0.25
TRAFD1-202ENST00000412615 LRP6O75581 1613 aa13.49□□□□□ -0.25
TRAFD1-202ENST00000412615 COL14A1Q05707 1796 aaKnown RBP13.49□□□□□ -0.25
TRAFD1-202ENST00000412615 GPAA1O43292 621 aa13.49□□□□□ -0.25
TRAFD1-202ENST00000412615 MCAMP43121 646 aa13.49□□□□□ -0.25
TRAFD1-202ENST00000412615 TYRO3Q06418 890 aa13.49□□□□□ -0.25
TRAFD1-202ENST00000412615 NCOA7Q8NI08 942 aa13.49□□□□□ -0.25
TRAFD1-202ENST00000412615 FAM200AQ8TCP9 573 aa13.49□□□□□ -0.25
TRAFD1-202ENST00000412615 CLSTN2Q9H4D0 955 aa13.49□□□□□ -0.25
TRAFD1-202ENST00000412615 NCOA5Q9HCD5 579 aaKnown RBP13.49□□□□□ -0.25
TRAFD1-202ENST00000412615 HAND2P61296 217 aa13.48□□□□□ -0.25
TRAFD1-202ENST00000412615 PI16Q6UXB8 463 aa13.48□□□□□ -0.25
TRAFD1-202ENST00000412615 RBM43Q6ZSC3 357 aaKnown RBP13.48□□□□□ -0.25
TRAFD1-202ENST00000412615 VGLL2Q8N8G2 317 aa13.48□□□□□ -0.25
TRAFD1-202ENST00000412615 ZNF396Q96N95 335 aaPredicted RBP13.48□□□□□ -0.25
TRAFD1-202ENST00000412615 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.48□□□□□ -0.25
TRAFD1-202ENST00000412615 DHX16O60231 1041 aaKnown RBP13.48□□□□□ -0.25
TRAFD1-202ENST00000412615 TPM2P07951 284 aa13.48□□□□□ -0.25
TRAFD1-202ENST00000412615 ADD2P35612 726 aa13.48□□□□□ -0.25
TRAFD1-202ENST00000412615 TERF1P54274 439 aa13.48□□□□□ -0.25
TRAFD1-202ENST00000412615 RALYLQ86SE5 291 aaKnown RBP13.48□□□□□ -0.25
TRAFD1-202ENST00000412615 AK7Q96M32 723 aa13.48□□□□□ -0.25
TRAFD1-202ENST00000412615 RCOR1Q9UKL0 485 aa13.48□□□□□ -0.25
TRAFD1-202ENST00000412615 TBC1D2BQ9UPU7 963 aa13.48□□□□□ -0.25
TRAFD1-202ENST00000412615 PRC1O43663 620 aa13.47□□□□□ -0.25
TRAFD1-202ENST00000412615 ADD1P35611 737 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms