RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 NCBP1Q09161 790 aaKnown RBP9.72□□□□□ -0.85
PBRM1-209ENST00000412587 TTF1Q15361 905 aaPredicted RBP9.72□□□□□ -0.85
PBRM1-209ENST00000412587 ODF2Q5BJF6 829 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 MSL1Q68DK7 614 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 LMBR1LQ6UX01 489 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 SETDB2Q96T68 719 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 IRAK4Q9NWZ3 460 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 CTAGE5O15320 804 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 USP48Q86UV5 1035 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 TSPYL6Q8N831 410 aa9.72□□□□□ -0.85
PBRM1-209ENST00000412587 A6NNZ2 444 aa9.71□□□□□ -0.85
PBRM1-209ENST00000412587 LDHCP07864 332 aa9.71□□□□□ -0.85
PBRM1-209ENST00000412587 HDAC1Q13547 482 aaPredicted RBP9.71□□□□□ -0.85
PBRM1-209ENST00000412587 KRT24Q2M2I5 525 aa9.71□□□□□ -0.85
PBRM1-209ENST00000412587 TUBB8Q3ZCM7 444 aa9.71□□□□□ -0.85
PBRM1-209ENST00000412587 PPFIBP1Q86W92 1011 aa9.71□□□□□ -0.85
PBRM1-209ENST00000412587 IQCA1Q86XH1 822 aa9.71□□□□□ -0.85
PBRM1-209ENST00000412587 CCDC83Q8IWF9 413 aa9.71□□□□□ -0.85
PBRM1-209ENST00000412587 ANKRD44Q8N8A2 993 aa9.71□□□□□ -0.85
PBRM1-209ENST00000412587 SH3GL3Q99963 347 aa9.71□□□□□ -0.85
PBRM1-209ENST00000412587 RNF41Q9H4P4 317 aaPredicted RBP9.71□□□□□ -0.85
PBRM1-209ENST00000412587 RNMTO43148 476 aaKnown RBP9.71□□□□□ -0.85
PBRM1-209ENST00000412587 WWC2Q6AWC2 1192 aa9.71□□□□□ -0.85
PBRM1-209ENST00000412587 CKAP2LQ8IYA6 745 aa9.71□□□□□ -0.85
PBRM1-209ENST00000412587 SIRT1Q96EB6 747 aa9.71□□□□□ -0.85
PBRM1-209ENST00000412587 RANBP6O60518 1105 aaKnown RBP9.71□□□□□ -0.86
PBRM1-209ENST00000412587 PHACTR2O75167 634 aa9.71□□□□□ -0.86
PBRM1-209ENST00000412587 CYP2C19P33261 490 aa9.71□□□□□ -0.86
PBRM1-209ENST00000412587 PEX19P40855 299 aa9.71□□□□□ -0.86
PBRM1-209ENST00000412587 ZNF444Q8N0Y2 327 aaPredicted RBP9.71□□□□□ -0.86
PBRM1-209ENST00000412587 NLRP3Q96P20 1036 aa9.71□□□□□ -0.86
PBRM1-209ENST00000412587 ODF2LQ9ULJ1 636 aa9.71□□□□□ -0.86
PBRM1-209ENST00000412587 ST5P78524 1137 aa9.71□□□□□ -0.86
PBRM1-209ENST00000412587 FILIP1LQ4L180 1135 aa9.71□□□□□ -0.86
PBRM1-209ENST00000412587 TSHZ3Q63HK5 1081 aa9.71□□□□□ -0.86
PBRM1-209ENST00000412587 FAM76AQ8TAV0 307 aa9.71□□□□□ -0.86
PBRM1-209ENST00000412587 CALR3Q96L12 384 aaKnown RBP9.71□□□□□ -0.86
PBRM1-209ENST00000412587 NBPF3Q9H094 633 aa9.71□□□□□ -0.86
PBRM1-209ENST00000412587 NIP7Q9Y221 180 aaKnown RBP eCLIP9.71□□□□□ -0.86
PBRM1-209ENST00000412587 PCDHB15Q9Y5E8 787 aa9.71□□□□□ -0.86
PBRM1-209ENST00000412587 SBNO1A3KN83 1393 aa9.71□□□□□ -0.86
PBRM1-209ENST00000412587 NPC1L1Q9UHC9 1359 aa9.71□□□□□ -0.86
PBRM1-209ENST00000412587 PCDH11XQ9BZA7 1347 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 PCDH11YQ9BZA8 1340 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 SLFN14P0C7P3 912 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 UQCRFS1P1P0C7P4 283 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 BRPF1P55201 1214 aaPredicted RBP9.7□□□□□ -0.86
PBRM1-209ENST00000412587 TBC1D9Q6ZT07 1266 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 MBD5Q9P267 1494 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 ABCA8O94911 1581 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 NBPF20Q3BBV1 942 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 CEP85LQ5SZL2 805 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 KIAA1524Q8TCG1 905 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 PIK3R5Q8WYR1 880 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 N4BP2L2Q92802 583 aaPredicted RBP9.7□□□□□ -0.86
PBRM1-209ENST00000412587 SH2B1Q9NRF2 756 aaPredicted RBP9.7□□□□□ -0.86
PBRM1-209ENST00000412587 TMEM63CQ9P1W3 806 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 PLEKHG3A1L390 1219 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 ATP8B2P98198 1209 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 TMC6Q7Z403 805 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 FERMT3Q86UX7 667 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 DZIP3Q86Y13 1208 aaKnown RBP9.7□□□□□ -0.86
PBRM1-209ENST00000412587 IL13P35225 146 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 LIG3P49916 1009 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 CFAP100Q494V2 611 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 CCDC97Q96F63 343 aaPredicted RBP9.7□□□□□ -0.86
PBRM1-209ENST00000412587 SLAIN2Q9P270 581 aa9.7□□□□□ -0.86
PBRM1-209ENST00000412587 MAGEC2Q9UBF1 373 aaPredicted RBP9.7□□□□□ -0.86
PBRM1-209ENST00000412587 CFAP65Q6ZU64 1925 aaKnown RBP9.69□□□□□ -0.86
PBRM1-209ENST00000412587 OPA1O60313 960 aa9.69□□□□□ -0.86
PBRM1-209ENST00000412587 STX1AQ16623 288 aa9.69□□□□□ -0.86
PBRM1-209ENST00000412587 TMEM132AQ24JP5 1023 aa9.69□□□□□ -0.86
PBRM1-209ENST00000412587 TTC22Q5TAA0 569 aa9.69□□□□□ -0.86
PBRM1-209ENST00000412587 CCDC12Q8WUD4 166 aaPredicted RBP9.69□□□□□ -0.86
PBRM1-209ENST00000412587 ZHX3Q9H4I2 956 aa9.69□□□□□ -0.86
PBRM1-209ENST00000412587 ARHGEF5Q12774 1597 aa9.69□□□□□ -0.86
PBRM1-209ENST00000412587 ANKRD7Q92527 254 aa9.69□□□□□ -0.86
PBRM1-209ENST00000412587 CABS1Q96KC9 395 aa9.69□□□□□ -0.86
PBRM1-209ENST00000412587 SLC24A3Q9HC58 644 aa9.69□□□□□ -0.86
PBRM1-209ENST00000412587 PRM3Q9NNZ6 103 aa9.69□□□□□ -0.86
PBRM1-209ENST00000412587 IFIT3O14879 490 aaKnown RBP9.69□□□□□ -0.86
PBRM1-209ENST00000412587 KIF4AO95239 1232 aa9.69□□□□□ -0.86
PBRM1-209ENST00000412587 TOP1P11387 765 aaKnown RBP9.69□□□□□ -0.86
PBRM1-209ENST00000412587 IL15P40933 162 aaPredicted RBP9.69□□□□□ -0.86
PBRM1-209ENST00000412587 ANO6Q4KMQ2 910 aa9.69□□□□□ -0.86
PBRM1-209ENST00000412587 JPH2Q9BR39 696 aaPredicted RBP9.69□□□□□ -0.86
PBRM1-209ENST00000412587 CAPN7Q9Y6W3 813 aa9.69□□□□□ -0.86
PBRM1-209ENST00000412587 BAG3O95817 575 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 NUCB1Q02818 461 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 ERCC6LQ2NKX8 1250 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 SLFNL1Q499Z3 407 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 SPTY2D1Q68D10 685 aaPredicted RBP9.68□□□□□ -0.86
PBRM1-209ENST00000412587 CDCA7Q9BWT1 371 aaPredicted RBP9.68□□□□□ -0.86
PBRM1-209ENST00000412587 ZSWIM4Q9H7M6 989 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 LIMCH1Q9UPQ0 1083 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 EPB41L2O43491 1005 aaKnown RBP9.68□□□□□ -0.86
PBRM1-209ENST00000412587 SLC8A1P32418 973 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 ZNF76P36508 570 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 STIM1Q13586 685 aa9.68□□□□□ -0.86
PBRM1-209ENST00000412587 SRLQ86TD4 932 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms