RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 CACYBPQ9HB71 228 aaKnown RBP12.73□□□□□ -0.37
PRPF40A-202ENST00000410080 C16orf45Q96MC5 204 aaPredicted RBP12.73□□□□□ -0.37
PRPF40A-202ENST00000410080 NKTRP30414 1462 aaKnown RBP12.73□□□□□ -0.37
PRPF40A-202ENST00000410080 PPP1R21Q6ZMI0 780 aa12.73□□□□□ -0.37
PRPF40A-202ENST00000410080 MAGEB6P1A0A0J9YX57 407 aa12.73□□□□□ -0.37
PRPF40A-202ENST00000410080 GJB2P29033 226 aa12.73□□□□□ -0.37
PRPF40A-202ENST00000410080 MSANTD4Q8NCY6 345 aa12.73□□□□□ -0.37
PRPF40A-202ENST00000410080 SPAG5Q96R06 1193 aa12.73□□□□□ -0.37
PRPF40A-202ENST00000410080 BACH2Q9BYV9 841 aa12.73□□□□□ -0.37
PRPF40A-202ENST00000410080 KCNA4P22459 653 aa12.73□□□□□ -0.37
PRPF40A-202ENST00000410080 RSPH3Q86UC2 560 aa12.73□□□□□ -0.37
PRPF40A-202ENST00000410080 PDCL2Q8N4E4 241 aa12.73□□□□□ -0.37
PRPF40A-202ENST00000410080 FAM200AQ8TCP9 573 aa12.73□□□□□ -0.37
PRPF40A-202ENST00000410080 RRP36Q96EU6 259 aaKnown RBP12.73□□□□□ -0.37
PRPF40A-202ENST00000410080 SLC8A3P57103 927 aa12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 DCAF17Q5H9S7 520 aaPredicted RBP12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 EVI5LQ96CN4 794 aa12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 DBF4Q9UBU7 674 aaPredicted RBP12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 ZYXQ15942 572 aaKnown RBP12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 IFNL2Q8IZJ0 200 aa12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 GTPBP4Q9BZE4 634 aaKnown RBP12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 STX1AQ16623 288 aa12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 ACEP12821 1306 aa12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 ABL1P00519 1130 aa12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 FLIIQ13045 1269 aa12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 RTN1Q16799 776 aa12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 KANK3Q6NY19 840 aa12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 GPATCH11Q8N954 259 aa12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 CABLES1Q8TDN4 633 aa12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 PYM1Q9BRP8 204 aaKnown RBP12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 ERCC5P28715 1186 aaPredicted RBP12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 GPR162Q16538 588 aa12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 MKRN1Q9UHC7 482 aaKnown RBP12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 IVNS1ABPQ9Y6Y0 642 aa12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 IDI1Q13907 227 aa12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 RRAGBQ5VZM2 374 aa12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 CGNQ9P2M7 1197 aaKnown RBP12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 NSFL1CQ9UNZ2 370 aaKnown RBP12.72□□□□□ -0.37
PRPF40A-202ENST00000410080 RARSP54136 660 aaKnown RBP12.71□□□□□ -0.37
PRPF40A-202ENST00000410080 CTAGE5O15320 804 aa12.71□□□□□ -0.37
PRPF40A-202ENST00000410080 SLC39A6Q13433 755 aa12.71□□□□□ -0.37
PRPF40A-202ENST00000410080 BRDTQ58F21 947 aaPredicted RBP12.71□□□□□ -0.37
PRPF40A-202ENST00000410080 RMND1Q9NWS8 449 aa12.71□□□□□ -0.37
PRPF40A-202ENST00000410080 FANCAO15360 1455 aa12.71□□□□□ -0.37
PRPF40A-202ENST00000410080 MAGEB6Q8N7X4 407 aa12.71□□□□□ -0.37
PRPF40A-202ENST00000410080 KRT23Q9C075 422 aa12.71□□□□□ -0.37
PRPF40A-202ENST00000410080 PPP4R3BQ5MIZ7 849 aa12.71□□□□□ -0.37
PRPF40A-202ENST00000410080 SELENOSQ9BQE4 189 aa12.71□□□□□ -0.37
PRPF40A-202ENST00000410080 PRDM10Q9NQV6 1147 aa12.71□□□□□ -0.37
PRPF40A-202ENST00000410080 MCM5P33992 734 aa12.71□□□□□ -0.38
PRPF40A-202ENST00000410080 IPO4Q8TEX9 1081 aaKnown RBP12.71□□□□□ -0.38
PRPF40A-202ENST00000410080 SCAND2PQ9GZW5 306 aaPredicted RBP12.71□□□□□ -0.38
PRPF40A-202ENST00000410080 SH2B1Q9NRF2 756 aaPredicted RBP12.71□□□□□ -0.38
PRPF40A-202ENST00000410080 N4BP3O15049 544 aa12.71□□□□□ -0.38
PRPF40A-202ENST00000410080 NBPF7P0C2Y1 421 aaPredicted RBP12.71□□□□□ -0.38
PRPF40A-202ENST00000410080 MCM7P33993 719 aa12.71□□□□□ -0.38
PRPF40A-202ENST00000410080 LRRC2Q9BYS8 371 aa12.71□□□□□ -0.38
PRPF40A-202ENST00000410080 ASIC1P78348 528 aa12.7□□□□□ -0.38
PRPF40A-202ENST00000410080 MAEAQ7L5Y9 396 aa12.7□□□□□ -0.38
PRPF40A-202ENST00000410080 CHPF2Q9P2E5 772 aa12.7□□□□□ -0.38
PRPF40A-202ENST00000410080 WDR7Q9Y4E6 1490 aa12.7□□□□□ -0.38
PRPF40A-202ENST00000410080 M0QZ92 97 aa12.7□□□□□ -0.38
PRPF40A-202ENST00000410080 CHMP2AO43633 222 aa12.7□□□□□ -0.38
PRPF40A-202ENST00000410080 PPP1R7Q15435 360 aa12.7□□□□□ -0.38
PRPF40A-202ENST00000410080 DDB1Q16531 1140 aa12.7□□□□□ -0.38
PRPF40A-202ENST00000410080 ATP2A1O14983 1001 aa12.7□□□□□ -0.38
PRPF40A-202ENST00000410080 SMARCC1Q92922 1105 aaPredicted RBP12.7□□□□□ -0.38
PRPF40A-202ENST00000410080 PDIA4P13667 645 aaKnown RBP12.7□□□□□ -0.38
PRPF40A-202ENST00000410080 CCDC89Q8N998 374 aa12.7□□□□□ -0.38
PRPF40A-202ENST00000410080 ORC3Q9UBD5 711 aaPredicted RBP12.7□□□□□ -0.38
PRPF40A-202ENST00000410080 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.7□□□□□ -0.384e-9■■■■□ 21.1
PRPF40A-202ENST00000410080 PTPDC1A2A3K4 754 aa12.7□□□□□ -0.38
PRPF40A-202ENST00000410080 NOL3O60936 208 aaKnown RBP12.7□□□□□ -0.38
PRPF40A-202ENST00000410080 KIAA0586Q9BVV6 1533 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 PI4KAP2A4QPH2 592 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 CNGA1P29973 690 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 ALDH1L2Q3SY69 923 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 PI4KAP1Q8N8J0 262 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 GDPD2Q9HCC8 539 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 SBNO2Q9Y2G9 1366 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 ZCRB1Q8TBF4 217 aaKnown RBP12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 PLIN2Q99541 437 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 TRIM7Q9C029 511 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 MCM9Q9NXL9 1143 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 V9GYY5 206 aaPredicted RBP12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 SMC6Q96SB8 1091 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 FRMD4BQ9Y2L6 1034 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 DDX39AO00148 427 aaKnown RBP12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 EIF6P56537 245 aaKnown RBP12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 TRAF1Q13077 416 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 MBIPQ9NS73 344 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 HMGXB3Q12766 1538 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 CCDC169A6NNP5 214 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 ZBTB43O43298 467 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 MYCLP12524 364 aaPredicted RBP12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 ESR2Q92731 530 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 AKR1B10O60218 316 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 SYKP43405 635 aa12.69□□□□□ -0.38
PRPF40A-202ENST00000410080 FNBP1Q96RU3 617 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms