RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 MYH15Q9Y2K3 1946 aa19.59■□□□□ 0.73
LIMS2-208ENST00000410011 LRRFIP1Q32MZ4 808 aaKnown RBP19.58■□□□□ 0.73
LIMS2-208ENST00000410011 MRFAP1L1Q96HT8 127 aa19.58■□□□□ 0.73
LIMS2-208ENST00000410011 PDIA3P30101 505 aaKnown RBP19.58■□□□□ 0.72
LIMS2-208ENST00000410011 SNW1Q13573 536 aaKnown RBP19.58■□□□□ 0.72
LIMS2-208ENST00000410011 STX1AQ16623 288 aa19.58■□□□□ 0.72
LIMS2-208ENST00000410011 ZSCAN25Q6NSZ9 544 aa19.58■□□□□ 0.72
LIMS2-208ENST00000410011 ENGASEQ8NFI3 743 aa19.58■□□□□ 0.72
LIMS2-208ENST00000410011 NEUROD6Q96NK8 337 aa19.58■□□□□ 0.72
LIMS2-208ENST00000410011 NEMFO60524 1076 aa19.57■□□□□ 0.72
LIMS2-208ENST00000410011 APOBRQ0VD83 1088 aa19.57■□□□□ 0.72
LIMS2-208ENST00000410011 CCAR1Q8IX12 1150 aaKnown RBP19.57■□□□□ 0.72
LIMS2-208ENST00000410011 LRRC2Q9BYS8 371 aa19.57■□□□□ 0.72
LIMS2-208ENST00000410011 NUP188Q5SRE5 1749 aa19.57■□□□□ 0.72
LIMS2-208ENST00000410011 TIMM10P62072 90 aa19.57■□□□□ 0.72
LIMS2-208ENST00000410011 MAST3O60307 1309 aa19.56■□□□□ 0.72
LIMS2-208ENST00000410011 ERVV-2B6SEH9 535 aa19.56■□□□□ 0.72
LIMS2-208ENST00000410011 IFIT1P09914 478 aaKnown RBP19.56■□□□□ 0.72
LIMS2-208ENST00000410011 ATF3P18847 181 aa19.56■□□□□ 0.72
LIMS2-208ENST00000410011 FAM160A1Q05DH4 1040 aa19.56■□□□□ 0.72
LIMS2-208ENST00000410011 DRC7Q8IY82 874 aa19.56■□□□□ 0.72
LIMS2-208ENST00000410011 TNS3Q68CZ2 1445 aa19.56■□□□□ 0.72
LIMS2-208ENST00000410011 SYCP1Q15431 976 aa19.56■□□□□ 0.72
LIMS2-208ENST00000410011 CCDC73Q6ZRK6 1079 aa19.56■□□□□ 0.72
LIMS2-208ENST00000410011 CTNNA3Q9UI47 895 aa19.56■□□□□ 0.72
LIMS2-208ENST00000410011 GOLGA6L19H0YKK7 550 aa19.55■□□□□ 0.72
LIMS2-208ENST00000410011 RIOK3O14730 519 aaKnown RBP19.55■□□□□ 0.72
LIMS2-208ENST00000410011 USP28Q96RU2 1077 aa19.55■□□□□ 0.72
LIMS2-208ENST00000410011 CLIP2Q9UDT6 1046 aa19.55■□□□□ 0.72
LIMS2-208ENST00000410011 TJP1Q07157 1748 aa19.55■□□□□ 0.72
LIMS2-208ENST00000410011 UBR2Q8IWV8 1755 aa19.55■□□□□ 0.72
LIMS2-208ENST00000410011 ZFYP08048 801 aaPredicted RBP19.54■□□□□ 0.72
LIMS2-208ENST00000410011 BCL2L12Q9HB09 334 aa19.54■□□□□ 0.72
LIMS2-208ENST00000410011 ANO10Q9NW15 660 aa19.54■□□□□ 0.72
LIMS2-208ENST00000410011 A0A1B0GUL7 405 aa19.54■□□□□ 0.72
LIMS2-208ENST00000410011 SMAP1Q8IYB5 467 aaPredicted RBP19.54■□□□□ 0.72
LIMS2-208ENST00000410011 ANKRD7Q92527 254 aa19.54■□□□□ 0.72
LIMS2-208ENST00000410011 RTEL1Q9NZ71 1219 aa19.54■□□□□ 0.72
LIMS2-208ENST00000410011 NRBP1Q9UHY1 535 aa19.54■□□□□ 0.72
LIMS2-208ENST00000410011 ABCC12Q96J65 1359 aa19.54■□□□□ 0.72
LIMS2-208ENST00000410011 A0A1W2PQ27 194 aa19.53■□□□□ 0.72
LIMS2-208ENST00000410011 A0A1W2PQ64 194 aa19.53■□□□□ 0.72
LIMS2-208ENST00000410011 A0A1W2PQD8 194 aa19.53■□□□□ 0.72
LIMS2-208ENST00000410011 KINO60870 393 aaKnown RBP19.53■□□□□ 0.72
LIMS2-208ENST00000410011 NKX1-1Q15270 411 aaPredicted RBP19.53■□□□□ 0.72
LIMS2-208ENST00000410011 TTLL7Q6ZT98 887 aa19.53■□□□□ 0.72
LIMS2-208ENST00000410011 GOLPH3LQ9H4A5 285 aa19.53■□□□□ 0.72
LIMS2-208ENST00000410011 PAXBP1Q9Y5B6 917 aa19.53■□□□□ 0.72
LIMS2-208ENST00000410011 RBM6P78332 1123 aaKnown RBP19.53■□□□□ 0.72
LIMS2-208ENST00000410011 ADALQ6DHV7 355 aa19.53■□□□□ 0.72
LIMS2-208ENST00000410011 CARMIL3Q8ND23 1372 aa19.53■□□□□ 0.72
LIMS2-208ENST00000410011 PCDH11XQ9BZA7 1347 aa19.52■□□□□ 0.72
LIMS2-208ENST00000410011 PCDH11YQ9BZA8 1340 aa19.52■□□□□ 0.72
LIMS2-208ENST00000410011 LRRC24Q50LG9 513 aa19.52■□□□□ 0.72
LIMS2-208ENST00000410011 ILDR1Q86SU0 546 aaPredicted RBP19.52■□□□□ 0.72
LIMS2-208ENST00000410011 AKAP2Q9Y2D5 859 aa19.52■□□□□ 0.72
LIMS2-208ENST00000410011 DHX16O60231 1041 aaKnown RBP19.52■□□□□ 0.71
LIMS2-208ENST00000410011 CCT2P78371 535 aaKnown RBP19.52■□□□□ 0.71
LIMS2-208ENST00000410011 LRMPQ12912 555 aa19.52■□□□□ 0.71
LIMS2-208ENST00000410011 CACTINQ8WUQ7 758 aaKnown RBP19.52■□□□□ 0.71
LIMS2-208ENST00000410011 CEP126Q9P2H0 1117 aa19.52■□□□□ 0.71
LIMS2-208ENST00000410011 SPATA31A3Q5VYP0 1347 aa19.51■□□□□ 0.71
LIMS2-208ENST00000410011 WDR19Q8NEZ3 1342 aa19.51■□□□□ 0.71
LIMS2-208ENST00000410011 SMTNL1A8MU46 457 aa19.51■□□□□ 0.71
LIMS2-208ENST00000410011 FDPSP14324 419 aaKnown RBP19.51■□□□□ 0.71
LIMS2-208ENST00000410011 TRIM28Q13263 835 aaKnown RBP19.51■□□□□ 0.71
LIMS2-208ENST00000410011 C11orf57Q6ZUT1 292 aaPredicted RBP19.51■□□□□ 0.71
LIMS2-208ENST00000410011 LRRC8AQ8IWT6 810 aa19.51■□□□□ 0.71
LIMS2-208ENST00000410011 KCPQ6ZWJ8 1503 aa19.51■□□□□ 0.71
LIMS2-208ENST00000410011 CEBPZQ03701 1054 aaKnown RBP19.51■□□□□ 0.71
LIMS2-208ENST00000410011 CCDC158Q5M9N0 1113 aa19.51■□□□□ 0.71
LIMS2-208ENST00000410011 FMR1NBQ8N0W7 255 aaPredicted RBP19.51■□□□□ 0.71
LIMS2-208ENST00000410011 OSBP2Q969R2 916 aa19.51■□□□□ 0.71
LIMS2-208ENST00000410011 ISCA1Q9BUE6 129 aa19.51■□□□□ 0.71
LIMS2-208ENST00000410011 KCND1Q9NSA2 647 aa19.51■□□□□ 0.71
LIMS2-208ENST00000410011 M0R2C6 588 aa19.5■□□□□ 0.71
LIMS2-208ENST00000410011 CHRNA2Q15822 529 aa19.5■□□□□ 0.71
LIMS2-208ENST00000410011 SLFNL1Q499Z3 407 aa19.5■□□□□ 0.71
LIMS2-208ENST00000410011 TSC1Q92574 1164 aa19.5■□□□□ 0.71
LIMS2-208ENST00000410011 NAT10Q9H0A0 1025 aaKnown RBP19.5■□□□□ 0.71
LIMS2-208ENST00000410011 PAPPAQ13219 1627 aa19.5■□□□□ 0.71
LIMS2-208ENST00000410011 CCDC144BQ3MJ40 725 aa19.5■□□□□ 0.71
LIMS2-208ENST00000410011 DHX40Q8IX18 779 aaKnown RBP19.5■□□□□ 0.71
LIMS2-208ENST00000410011 CCDC144CPQ8IYA2 1237 aa19.5■□□□□ 0.71
LIMS2-208ENST00000410011 ZCRB1Q8TBF4 217 aaKnown RBP19.5■□□□□ 0.71
LIMS2-208ENST00000410011 MRPS27Q92552 414 aaKnown RBP19.5■□□□□ 0.71
LIMS2-208ENST00000410011 PLA2G12BQ9BX93 195 aa19.5■□□□□ 0.71
LIMS2-208ENST00000410011 NCOA5Q9HCD5 579 aaKnown RBP19.5■□□□□ 0.71
LIMS2-208ENST00000410011 BECN2A8MW95 431 aa19.49■□□□□ 0.71
LIMS2-208ENST00000410011 YEATS4O95619 227 aa19.49■□□□□ 0.71
LIMS2-208ENST00000410011 ME1P48163 572 aa19.49■□□□□ 0.71
LIMS2-208ENST00000410011 IMMTQ16891 758 aaKnown RBP19.49■□□□□ 0.71
LIMS2-208ENST00000410011 FSIP1Q8NA03 581 aa19.49■□□□□ 0.71
LIMS2-208ENST00000410011 CABLES1Q8TDN4 633 aa19.49■□□□□ 0.71
LIMS2-208ENST00000410011 BPIFA3Q9BQP9 254 aa19.49■□□□□ 0.71
LIMS2-208ENST00000410011 FTOQ9C0B1 505 aaKnown RBP eCLIP19.49■□□□□ 0.71
LIMS2-208ENST00000410011 POLR3EQ9NVU0 708 aa19.49■□□□□ 0.71
LIMS2-208ENST00000410011 PCDHA7Q9UN72 937 aa19.49■□□□□ 0.71
LIMS2-208ENST00000410011 TNS2Q63HR2 1409 aa19.48■□□□□ 0.71
LIMS2-208ENST00000410011 BRAPQ7Z569 592 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms