RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 RBM26Q5T8P6 1007 aaKnown RBP22.34■■□□□ 1.17
LSM5-204ENST00000409909 AGBL3Q8NEM8 1001 aa22.34■■□□□ 1.17
LSM5-204ENST00000409909 COA1Q9GZY4 146 aa22.34■■□□□ 1.17
LSM5-204ENST00000409909 BICC1Q9H694 974 aaKnown RBP22.34■■□□□ 1.17
LSM5-204ENST00000409909 NOB1Q9ULX3 412 aaKnown RBP22.34■■□□□ 1.17
LSM5-204ENST00000409909 IRS2Q9Y4H2 1338 aa22.33■■□□□ 1.17
LSM5-204ENST00000409909 A0A1B0GUL6 1792 aa22.33■■□□□ 1.17
LSM5-204ENST00000409909 RARSP54136 660 aaKnown RBP22.33■■□□□ 1.17
LSM5-204ENST00000409909 BRPF1P55201 1214 aaPredicted RBP22.33■■□□□ 1.17
LSM5-204ENST00000409909 RABL6Q3YEC7 729 aaPredicted RBP22.33■■□□□ 1.17
LSM5-204ENST00000409909 LDHAL6AQ6ZMR3 332 aa22.33■■□□□ 1.17
LSM5-204ENST00000409909 ANKRD44Q8N8A2 993 aa22.33■■□□□ 1.17
LSM5-204ENST00000409909 TRPM7Q96QT4 1865 aa22.32■■□□□ 1.16
LSM5-204ENST00000409909 ZNF646O15015 1829 aaPredicted RBP22.32■■□□□ 1.16
LSM5-204ENST00000409909 KCNJ4P48050 445 aa22.32■■□□□ 1.16
LSM5-204ENST00000409909 ZNF280AP59817 542 aaPredicted RBP22.32■■□□□ 1.16
LSM5-204ENST00000409909 TAF7LQ5H9L4 462 aa22.32■■□□□ 1.16
LSM5-204ENST00000409909 DACT2Q5SW24 774 aa22.32■■□□□ 1.16
LSM5-204ENST00000409909 MXD3Q9BW11 206 aa22.32■■□□□ 1.16
LSM5-204ENST00000409909 POLR2AP24928 1970 aaKnown RBP22.31■■□□□ 1.16
LSM5-204ENST00000409909 VEGFBP49765 207 aa22.31■■□□□ 1.16
LSM5-204ENST00000409909 DLK2Q6UY11 383 aa22.31■■□□□ 1.16
LSM5-204ENST00000409909 CDC37L1Q7L3B6 337 aa22.31■■□□□ 1.16
LSM5-204ENST00000409909 PUS3Q9BZE2 481 aaKnown RBP22.31■■□□□ 1.16
LSM5-204ENST00000409909 CNNM1Q9NRU3 951 aa22.31■■□□□ 1.16
LSM5-204ENST00000409909 RASSF10A6NK89 507 aa22.3■■□□□ 1.16
LSM5-204ENST00000409909 KIF4BQ2VIQ3 1234 aa22.3■■□□□ 1.16
LSM5-204ENST00000409909 C15orf52Q6ZUT6 534 aaKnown RBP22.3■■□□□ 1.16
LSM5-204ENST00000409909 USP48Q86UV5 1035 aa22.3■■□□□ 1.16
LSM5-204ENST00000409909 PLIN1O60240 522 aa22.29■■□□□ 1.16
LSM5-204ENST00000409909 USP17L8P0C7I0 530 aa22.29■■□□□ 1.16
LSM5-204ENST00000409909 DEFB115Q30KQ5 88 aa22.29■■□□□ 1.16
LSM5-204ENST00000409909 STRIP1Q5VSL9 837 aa22.29■■□□□ 1.16
LSM5-204ENST00000409909 ABT1Q9ULW3 272 aaKnown RBP22.29■■□□□ 1.16
LSM5-204ENST00000409909 ASTN2O75129 1339 aaPredicted RBP22.29■■□□□ 1.16
LSM5-204ENST00000409909 CELF2O95319 508 aaKnown RBP22.28■■□□□ 1.16
LSM5-204ENST00000409909 HNRNPUQ00839 825 aaKnown RBP eCLIP22.28■■□□□ 1.16
LSM5-204ENST00000409909 FBXW7Q969H0 707 aa22.28■■□□□ 1.16
LSM5-204ENST00000409909 CD209Q9NNX6 404 aa22.28■■□□□ 1.16
LSM5-204ENST00000409909 RIPOR2Q9Y4F9 1068 aa22.28■■□□□ 1.16
LSM5-204ENST00000409909 TTLL5Q6EMB2 1281 aa22.27■■□□□ 1.16
LSM5-204ENST00000409909 MYOZ2Q9NPC6 264 aa22.27■■□□□ 1.16
LSM5-204ENST00000409909 GTF2IP78347 998 aa22.26■■□□□ 1.15
LSM5-204ENST00000409909 SCARF1Q14162 830 aa22.26■■□□□ 1.15
LSM5-204ENST00000409909 KRT26Q7Z3Y9 468 aa22.26■■□□□ 1.15
LSM5-204ENST00000409909 API5Q9BZZ5 524 aaKnown RBP22.26■■□□□ 1.15
LSM5-204ENST00000409909 HSPA1AP0DMV8 641 aaKnown RBP22.25■■□□□ 1.15
LSM5-204ENST00000409909 HSPA1BP0DMV9 641 aaKnown RBP22.25■■□□□ 1.15
LSM5-204ENST00000409909 LRRC24Q50LG9 513 aa22.25■■□□□ 1.15
LSM5-204ENST00000409909 KLHDC4Q8TBB5 520 aa22.25■■□□□ 1.15
LSM5-204ENST00000409909 DCPSQ96C86 337 aaKnown RBP22.25■■□□□ 1.15
LSM5-204ENST00000409909 GGA3Q9NZ52 723 aa22.25■■□□□ 1.15
LSM5-204ENST00000409909 TLL2Q9Y6L7 1015 aa22.25■■□□□ 1.15
LSM5-204ENST00000409909 ADM5C9JUS6 153 aa22.24■■□□□ 1.15
LSM5-204ENST00000409909 IL1R1P14778 569 aa22.24■■□□□ 1.15
LSM5-204ENST00000409909 ARHGAP45Q92619 1136 aa22.24■■□□□ 1.15
LSM5-204ENST00000409909 ZNF408Q9H9D4 720 aa22.24■■□□□ 1.15
LSM5-204ENST00000409909 MYO3BQ8WXR4 1341 aa22.24■■□□□ 1.15
LSM5-204ENST00000409909 UBE4AQ14139 1066 aa22.23■■□□□ 1.15
LSM5-204ENST00000409909 ZNF804AQ7Z570 1209 aa22.23■■□□□ 1.15
LSM5-204ENST00000409909 SAPCD2Q86UD0 394 aa22.23■■□□□ 1.15
LSM5-204ENST00000409909 BCAR3O75815 825 aa22.22■■□□□ 1.15
LSM5-204ENST00000409909 RFX5P48382 616 aaPredicted RBP22.22■■□□□ 1.15
LSM5-204ENST00000409909 ANGEL2Q5VTE6 544 aaKnown RBP22.22■■□□□ 1.15
LSM5-204ENST00000409909 MROH5Q6ZUA9 1318 aa22.22■■□□□ 1.15
LSM5-204ENST00000409909 WDR33Q9C0J8 1336 aaKnown RBP22.22■■□□□ 1.15
LSM5-204ENST00000409909 UBTFL1P0CB47 393 aaPredicted RBP22.21■■□□□ 1.15
LSM5-204ENST00000409909 NBPF9Q3BBW0 867 aa22.21■■□□□ 1.15
LSM5-204ENST00000409909 CYP4F22Q6NT55 531 aa22.21■■□□□ 1.15
LSM5-204ENST00000409909 KIAA0825Q8IV33 1275 aa22.21■■□□□ 1.15
LSM5-204ENST00000409909 OGFOD1Q8N543 542 aa22.21■■□□□ 1.15
LSM5-204ENST00000409909 CERS5Q8N5B7 392 aa22.21■■□□□ 1.15
LSM5-204ENST00000409909 KIF16BQ96L93 1317 aa22.21■■□□□ 1.15
LSM5-204ENST00000409909 GYG1P46976 350 aa22.2■■□□□ 1.14
LSM5-204ENST00000409909 INTS3Q68E01 1043 aaKnown RBP22.2■■□□□ 1.14
LSM5-204ENST00000409909 SULF1Q8IWU6 871 aa22.2■■□□□ 1.14
LSM5-204ENST00000409909 VGLL2Q8N8G2 317 aa22.2■■□□□ 1.14
LSM5-204ENST00000409909 FAM84BQ96KN1 310 aaPredicted RBP22.2■■□□□ 1.14
LSM5-204ENST00000409909 CAPNS2Q96L46 248 aa22.2■■□□□ 1.14
LSM5-204ENST00000409909 TNNQ9UQP3 1299 aa22.2■■□□□ 1.14
LSM5-204ENST00000409909 METTL24Q5JXM2 366 aa22.19■■□□□ 1.14
LSM5-204ENST00000409909 MEIS3Q99687 375 aa22.19■■□□□ 1.14
LSM5-204ENST00000409909 SCAF8Q9UPN6 1271 aaKnown RBP22.19■■□□□ 1.14
LSM5-204ENST00000409909 JAG2Q9Y219 1238 aa22.19■■□□□ 1.14
LSM5-204ENST00000409909 WNT10BO00744 389 aa22.18■■□□□ 1.14
LSM5-204ENST00000409909 PTPN12Q05209 780 aaKnown RBP22.18■■□□□ 1.14
LSM5-204ENST00000409909 PAXIP1Q6ZW49 1069 aaPredicted RBP22.18■■□□□ 1.14
LSM5-204ENST00000409909 LRRFIP2Q9Y608 721 aaKnown RBP22.18■■□□□ 1.14
LSM5-204ENST00000409909 PITPNM2Q9BZ72 1349 aa22.17■■□□□ 1.14
LSM5-204ENST00000409909 SASH1O94885 1247 aa22.17■■□□□ 1.14
LSM5-204ENST00000409909 PDE8BO95263 885 aa22.17■■□□□ 1.14
LSM5-204ENST00000409909 TRIM27P14373 513 aa22.17■■□□□ 1.14
LSM5-204ENST00000409909 HIBADHP31937 336 aaKnown RBP22.17■■□□□ 1.14
LSM5-204ENST00000409909 MMP14P50281 582 aa22.17■■□□□ 1.14
LSM5-204ENST00000409909 GRM1Q13255 1194 aa22.17■■□□□ 1.14
LSM5-204ENST00000409909 TDRD7Q8NHU6 1098 aaKnown RBP22.17■■□□□ 1.14
LSM5-204ENST00000409909 FRAT1Q92837 279 aaPredicted RBP22.17■■□□□ 1.14
LSM5-204ENST00000409909 CDCA5Q96FF9 252 aa22.17■■□□□ 1.14
LSM5-204ENST00000409909 ZBED3Q96IU2 234 aaPredicted RBP22.17■■□□□ 1.14
LSM5-204ENST00000409909 HHIPL1Q96JK4 782 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms