RNA–Protein interactions for RNA: ENST00000409681.1

POLR1A-203, Transcript of RNA polymerase I subunit A, humanhuman

TSL 5 BASIC

Gene POLR1A, Length 6,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-203ENST00000409681 TMEM266Q2M3C6 531 aa11.79□□□□□ -0.52
POLR1A-203ENST00000409681 DALRD3Q5D0E6 543 aaKnown RBP11.79□□□□□ -0.52
POLR1A-203ENST00000409681 MYO3AQ8NEV4 1616 aa11.79□□□□□ -0.52
POLR1A-203ENST00000409681 CALM1P0DP23 149 aa11.79□□□□□ -0.52
POLR1A-203ENST00000409681 CALM2P0DP24 149 aa11.79□□□□□ -0.52
POLR1A-203ENST00000409681 CALM3P0DP25 149 aa11.79□□□□□ -0.52
POLR1A-203ENST00000409681 NLRP5P59047 1200 aa11.79□□□□□ -0.52
POLR1A-203ENST00000409681 ATF5Q9Y2D1 282 aaPredicted RBP11.79□□□□□ -0.52
POLR1A-203ENST00000409681 IFIT1BQ5T764 474 aaKnown RBP11.78□□□□□ -0.52
POLR1A-203ENST00000409681 LEMD3Q9Y2U8 911 aa11.78□□□□□ -0.52
POLR1A-203ENST00000409681 ZBTB7BO15156 539 aaPredicted RBP11.78□□□□□ -0.52
POLR1A-203ENST00000409681 TXNRD1Q16881 649 aa11.78□□□□□ -0.52
POLR1A-203ENST00000409681 CCDC93Q567U6 631 aa11.78□□□□□ -0.52
POLR1A-203ENST00000409681 QRICH2Q9H0J4 1663 aa11.78□□□□□ -0.52
POLR1A-203ENST00000409681 HAND2P61296 217 aa11.78□□□□□ -0.52
POLR1A-203ENST00000409681 BACH2Q9BYV9 841 aa11.78□□□□□ -0.52
POLR1A-203ENST00000409681 HELLSQ9NRZ9 838 aa11.78□□□□□ -0.52
POLR1A-203ENST00000409681 NPR1P16066 1061 aa11.78□□□□□ -0.52
POLR1A-203ENST00000409681 XDHP47989 1333 aa11.77□□□□□ -0.52
POLR1A-203ENST00000409681 IARSP41252 1262 aaKnown RBP11.77□□□□□ -0.52
POLR1A-203ENST00000409681 ME1P48163 572 aa11.77□□□□□ -0.52
POLR1A-203ENST00000409681 C8orf76Q96K31 380 aa11.77□□□□□ -0.52
POLR1A-203ENST00000409681 TMOD4Q9NZQ9 345 aa11.77□□□□□ -0.52
POLR1A-203ENST00000409681 LIMCH1Q9UPQ0 1083 aa11.77□□□□□ -0.52
POLR1A-203ENST00000409681 SPATA31A5Q5VU36 1347 aa11.77□□□□□ -0.53
POLR1A-203ENST00000409681 SPATA31A7Q8IWB4 1347 aa11.77□□□□□ -0.53
POLR1A-203ENST00000409681 SSFA2P28290 1259 aa11.77□□□□□ -0.53
POLR1A-203ENST00000409681 RTKN2Q8IZC4 609 aa11.77□□□□□ -0.53
POLR1A-203ENST00000409681 DACH1Q9UI36 760 aa11.77□□□□□ -0.53
POLR1A-203ENST00000409681 PTPRUQ92729 1446 aa11.77□□□□□ -0.53
POLR1A-203ENST00000409681 NOC3LQ8WTT2 800 aaKnown RBP11.77□□□□□ -0.53
POLR1A-203ENST00000409681 SSH2Q76I76 1423 aa11.77□□□□□ -0.53
POLR1A-203ENST00000409681 MMP10P09238 476 aa11.77□□□□□ -0.53
POLR1A-203ENST00000409681 METAP2P50579 478 aaKnown RBP eCLIP11.77□□□□□ -0.53
POLR1A-203ENST00000409681 CCDC148Q8NFR7 591 aa11.77□□□□□ -0.53
POLR1A-203ENST00000409681 MAGEC2Q9UBF1 373 aaPredicted RBP11.77□□□□□ -0.53
POLR1A-203ENST00000409681 NARFQ9UHQ1 456 aa11.77□□□□□ -0.53
POLR1A-203ENST00000409681 CCDC125Q86Z20 511 aa11.76□□□□□ -0.53
POLR1A-203ENST00000409681 ZNF594Q96JF6 807 aaPredicted RBP11.76□□□□□ -0.53
POLR1A-203ENST00000409681 RTL9Q8NET4 1388 aa11.76□□□□□ -0.53
POLR1A-203ENST00000409681 TAF5LO75529 589 aa11.76□□□□□ -0.53
POLR1A-203ENST00000409681 MIGA1Q8NAN2 632 aa11.76□□□□□ -0.53
POLR1A-203ENST00000409681 ZHX3Q9H4I2 956 aa11.76□□□□□ -0.53
POLR1A-203ENST00000409681 SLIT1O75093 1534 aa11.76□□□□□ -0.53
POLR1A-203ENST00000409681 TEKT1Q969V4 418 aa11.76□□□□□ -0.53
POLR1A-203ENST00000409681 ARHGEF10LQ9HCE6 1279 aa11.76□□□□□ -0.53
POLR1A-203ENST00000409681 PCDHB15Q9Y5E8 787 aa11.76□□□□□ -0.53
POLR1A-203ENST00000409681 EAPPQ56P03 285 aaPredicted RBP11.76□□□□□ -0.53
POLR1A-203ENST00000409681 TTLL6Q8N841 843 aa11.76□□□□□ -0.53
POLR1A-203ENST00000409681 ATG3Q9NT62 314 aa11.76□□□□□ -0.53
POLR1A-203ENST00000409681 AOX1Q06278 1338 aa11.76□□□□□ -0.53
POLR1A-203ENST00000409681 SSBP05455 408 aaKnown RBP eCLIP11.76□□□□□ -0.537e-6■■■□□ 18.1
POLR1A-203ENST00000409681 TIMM10P62072 90 aa11.76□□□□□ -0.53
POLR1A-203ENST00000409681 SLC4A8Q2Y0W8 1093 aa11.76□□□□□ -0.53
POLR1A-203ENST00000409681 RNF123Q5XPI4 1314 aa11.76□□□□□ -0.53
POLR1A-203ENST00000409681 RICTORQ6R327 1708 aa11.75□□□□□ -0.53
POLR1A-203ENST00000409681 NBPF7P0C2Y1 421 aaPredicted RBP11.75□□□□□ -0.53
POLR1A-203ENST00000409681 SDSP20132 328 aa11.75□□□□□ -0.53
POLR1A-203ENST00000409681 UBE4AQ14139 1066 aa11.75□□□□□ -0.53
POLR1A-203ENST00000409681 SCLT1Q96NL6 688 aa11.75□□□□□ -0.53
POLR1A-203ENST00000409681 ZNF408Q9H9D4 720 aa11.75□□□□□ -0.53
POLR1A-203ENST00000409681 SPON1Q9HCB6 807 aa11.75□□□□□ -0.53
POLR1A-203ENST00000409681 PIM2Q9P1W9 311 aa11.75□□□□□ -0.53
POLR1A-203ENST00000409681 TSHZ3Q63HK5 1081 aa11.75□□□□□ -0.53
POLR1A-203ENST00000409681 DDX11Q96FC9 970 aa11.75□□□□□ -0.53
POLR1A-203ENST00000409681 UPF3BQ9BZI7 483 aaKnown RBP11.75□□□□□ -0.53
POLR1A-203ENST00000409681 MASTLQ96GX5 879 aa11.75□□□□□ -0.53
POLR1A-203ENST00000409681 VAT1LQ9HCJ6 419 aa11.75□□□□□ -0.53
POLR1A-203ENST00000409681 CCDC39Q9UFE4 941 aa11.75□□□□□ -0.53
POLR1A-203ENST00000409681 BEND3Q5T5X7 828 aa11.75□□□□□ -0.53
POLR1A-203ENST00000409681 TBC1D9Q6ZT07 1266 aa11.75□□□□□ -0.53
POLR1A-203ENST00000409681 SPATA5Q8NB90 893 aa11.75□□□□□ -0.53
POLR1A-203ENST00000409681 JAG2Q9Y219 1238 aa11.75□□□□□ -0.53
POLR1A-203ENST00000409681 CEBPZQ03701 1054 aaKnown RBP11.75□□□□□ -0.53
POLR1A-203ENST00000409681 DCAF15Q66K64 600 aa11.75□□□□□ -0.53
POLR1A-203ENST00000409681 USP48Q86UV5 1035 aa11.75□□□□□ -0.53
POLR1A-203ENST00000409681 DCPSQ96C86 337 aaKnown RBP11.75□□□□□ -0.53
POLR1A-203ENST00000409681 DNAI2Q9GZS0 605 aa11.75□□□□□ -0.53
POLR1A-203ENST00000409681 CIZ1Q9ULV3 898 aaPredicted RBP11.75□□□□□ -0.53
POLR1A-203ENST00000409681 ZBTB43O43298 467 aa11.74□□□□□ -0.53
POLR1A-203ENST00000409681 FIBPO43427 364 aa11.74□□□□□ -0.53
POLR1A-203ENST00000409681 MBD4O95243 580 aa11.74□□□□□ -0.53
POLR1A-203ENST00000409681 GTF2IP78347 998 aa11.74□□□□□ -0.53
POLR1A-203ENST00000409681 SEMA3EO15041 775 aa11.74□□□□□ -0.53
POLR1A-203ENST00000409681 EN1Q05925 392 aaPredicted RBP11.74□□□□□ -0.53
POLR1A-203ENST00000409681 NMIQ13287 307 aaPredicted RBP11.74□□□□□ -0.53
POLR1A-203ENST00000409681 CCDC83Q8IWF9 413 aa11.74□□□□□ -0.53
POLR1A-203ENST00000409681 CCDC171Q6TFL3 1326 aa11.74□□□□□ -0.53
POLR1A-203ENST00000409681 IGHDP01880 384 aa11.74□□□□□ -0.53
POLR1A-203ENST00000409681 MFSD14BQ5SR56 506 aa11.74□□□□□ -0.53
POLR1A-203ENST00000409681 CEP57L1Q8IYX8 460 aa11.74□□□□□ -0.53
POLR1A-203ENST00000409681 TRIM21P19474 475 aaKnown RBP11.74□□□□□ -0.53
POLR1A-203ENST00000409681 MICU3Q86XE3 530 aa11.74□□□□□ -0.53
POLR1A-203ENST00000409681 DBNDD2Q9BQY9 259 aa11.74□□□□□ -0.53
POLR1A-203ENST00000409681 OFD1O75665 1012 aa11.73□□□□□ -0.53
POLR1A-203ENST00000409681 RLBP1P12271 317 aa11.73□□□□□ -0.53
POLR1A-203ENST00000409681 FILIP1LQ4L180 1135 aa11.73□□□□□ -0.53
POLR1A-203ENST00000409681 APPBP2Q92624 585 aa11.73□□□□□ -0.53
POLR1A-203ENST00000409681 VWDEQ8N2E2 1590 aa11.73□□□□□ -0.53
POLR1A-203ENST00000409681 SULF1Q8IWU6 871 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms