RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 NIF3L1Q9GZT8 377 aa7.61□□□□□ -1.19
PMS1-203ENST00000409593 ELNP15502 786 aa7.6□□□□□ -1.19
PMS1-203ENST00000409593 BAG6P46379 1132 aa7.6□□□□□ -1.19
PMS1-203ENST00000409593 DMRTB1Q96MA1 342 aa7.6□□□□□ -1.19
PMS1-203ENST00000409593 HHIPQ96QV1 700 aa7.6□□□□□ -1.19
PMS1-203ENST00000409593 ZKSCAN3Q9BRR0 538 aa7.6□□□□□ -1.19
PMS1-203ENST00000409593 LATS2Q9NRM7 1088 aa7.6□□□□□ -1.19
PMS1-203ENST00000409593 DZANK1Q9NVP4 752 aa7.6□□□□□ -1.19
PMS1-203ENST00000409593 C1QTNF9BB2RNN3 333 aa7.6□□□□□ -1.19
PMS1-203ENST00000409593 PTPRAP18433 802 aa7.6□□□□□ -1.19
PMS1-203ENST00000409593 CDC27P30260 824 aa7.6□□□□□ -1.19
PMS1-203ENST00000409593 USPL1Q5W0Q7 1092 aa7.6□□□□□ -1.19
PMS1-203ENST00000409593 TXNDC11Q6PKC3 985 aa7.6□□□□□ -1.19
PMS1-203ENST00000409593 TMC7Q7Z402 723 aa7.6□□□□□ -1.19
PMS1-203ENST00000409593 CD163Q86VB7 1156 aa7.6□□□□□ -1.19
PMS1-203ENST00000409593 DTWD1Q8N5C7 304 aa7.6□□□□□ -1.19
PMS1-203ENST00000409593 POP1Q99575 1024 aaKnown RBP7.6□□□□□ -1.19
PMS1-203ENST00000409593 PDE2AO00408 941 aaPredicted RBP7.59□□□□□ -1.19
PMS1-203ENST00000409593 ITGB2P05107 769 aa7.59□□□□□ -1.19
PMS1-203ENST00000409593 ADAMTSL4Q6UY14 1074 aa7.59□□□□□ -1.19
PMS1-203ENST00000409593 CACTIN-AS1Q8N1I8 211 aa7.59□□□□□ -1.19
PMS1-203ENST00000409593 NACC1Q96RE7 527 aa7.59□□□□□ -1.19
PMS1-203ENST00000409593 PPME1Q9Y570 386 aa7.59□□□□□ -1.19
PMS1-203ENST00000409593 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.58□□□□□ -1.2
PMS1-203ENST00000409593 LINC01387J3KSC0 135 aa7.58□□□□□ -1.2
PMS1-203ENST00000409593 CPNE3O75131 537 aaKnown RBP7.58□□□□□ -1.2
PMS1-203ENST00000409593 SHISA2Q6UWI4 295 aa7.58□□□□□ -1.2
PMS1-203ENST00000409593 SH2B1Q9NRF2 756 aaPredicted RBP7.58□□□□□ -1.2
PMS1-203ENST00000409593 NFKBIEO00221 500 aa7.57□□□□□ -1.2
PMS1-203ENST00000409593 MSTNO14793 375 aa7.57□□□□□ -1.2
PMS1-203ENST00000409593 IGHA2P01877 340 aa7.57□□□□□ -1.2
PMS1-203ENST00000409593 PEAR1Q5VY43 1037 aaPredicted RBP7.57□□□□□ -1.2
PMS1-203ENST00000409593 ASAP3Q8TDY4 903 aa7.57□□□□□ -1.2
PMS1-203ENST00000409593 MUC3BQ9H195 1237 aa7.57□□□□□ -1.2
PMS1-203ENST00000409593 USP21Q9UK80 565 aa7.57□□□□□ -1.2
PMS1-203ENST00000409593 EIF1AYO14602 144 aaKnown RBP7.57□□□□□ -1.2
PMS1-203ENST00000409593 DEAF1O75398 565 aaPredicted RBP7.57□□□□□ -1.2
PMS1-203ENST00000409593 EPHA1P21709 976 aa7.57□□□□□ -1.2
PMS1-203ENST00000409593 CABP4P57796 275 aa7.57□□□□□ -1.2
PMS1-203ENST00000409593 FAM117BQ6P1L5 589 aa7.57□□□□□ -1.2
PMS1-203ENST00000409593 ILDR2Q71H61 639 aa7.57□□□□□ -1.2
PMS1-203ENST00000409593 FBXO11Q86XK2 927 aa7.57□□□□□ -1.2
PMS1-203ENST00000409593 TMEM102Q8N9M5 508 aaPredicted RBP7.57□□□□□ -1.2
PMS1-203ENST00000409593 SPOCK3Q9BQ16 436 aa7.57□□□□□ -1.2
PMS1-203ENST00000409593 KRTAP9-2Q9BYQ4 174 aa7.57□□□□□ -1.2
PMS1-203ENST00000409593 NPHS2Q9NP85 383 aa7.57□□□□□ -1.2
PMS1-203ENST00000409593 SELPP16109 830 aa7.56□□□□□ -1.2
PMS1-203ENST00000409593 GALNT12Q8IXK2 581 aa7.56□□□□□ -1.2
PMS1-203ENST00000409593 ALKBH8Q96BT7 664 aaKnown RBP7.56□□□□□ -1.2
PMS1-203ENST00000409593 CARD10Q9BWT7 1032 aa7.56□□□□□ -1.2
PMS1-203ENST00000409593 C9orf172C9J069 976 aa7.55□□□□□ -1.2
PMS1-203ENST00000409593 IGHA1P01876 353 aa7.55□□□□□ -1.2
PMS1-203ENST00000409593 SETDB1Q15047 1291 aa7.55□□□□□ -1.2
PMS1-203ENST00000409593 ZSCAN29Q8IWY8 852 aaPredicted RBP7.55□□□□□ -1.2
PMS1-203ENST00000409593 NXPE3Q969Y0 559 aa7.55□□□□□ -1.2
PMS1-203ENST00000409593 SRA1Q9HD15 236 aaKnown RBP7.55□□□□□ -1.2
PMS1-203ENST00000409593 MAP4K3Q8IVH8 894 aa7.54□□□□□ -1.2
PMS1-203ENST00000409593 CSRNP1Q96S65 589 aa7.54□□□□□ -1.2
PMS1-203ENST00000409593 ADAM19Q9H013 955 aa7.54□□□□□ -1.2
PMS1-203ENST00000409593 DNAJC25Q9H1X3 360 aa7.54□□□□□ -1.2
PMS1-203ENST00000409593 A0A1W2PP55 124 aa7.54□□□□□ -1.2
PMS1-203ENST00000409593 METTL12A8MUP2 240 aa7.54□□□□□ -1.2
PMS1-203ENST00000409593 H3BRJ5 948 aa7.54□□□□□ -1.2
PMS1-203ENST00000409593 PROCP04070 461 aa7.54□□□□□ -1.2
PMS1-203ENST00000409593 GATA4P43694 442 aa7.54□□□□□ -1.2
PMS1-203ENST00000409593 SND1Q7KZF4 910 aaKnown RBP eCLIP7.54□□□□□ -1.2
PMS1-203ENST00000409593 SLC7A3Q8WY07 619 aa7.54□□□□□ -1.2
PMS1-203ENST00000409593 BSNDQ8WZ55 320 aa7.54□□□□□ -1.2
PMS1-203ENST00000409593 CCDC74AQ96AQ1 378 aa7.54□□□□□ -1.2
PMS1-203ENST00000409593 EHD4Q9H223 541 aa7.54□□□□□ -1.2
PMS1-203ENST00000409593 LIN7BQ9HAP6 207 aa7.54□□□□□ -1.2
PMS1-203ENST00000409593 KRTAP9-6A0A140TA67 174 aa7.53□□□□□ -1.2
PMS1-203ENST00000409593 FSCN2O14926 492 aa7.53□□□□□ -1.2
PMS1-203ENST00000409593 TREHO43280 583 aa7.53□□□□□ -1.2
PMS1-203ENST00000409593 GADD45BO75293 160 aaPredicted RBP7.53□□□□□ -1.2
PMS1-203ENST00000409593 NRG1Q02297 640 aaPredicted RBP7.53□□□□□ -1.2
PMS1-203ENST00000409593 DCAF11Q8TEB1 546 aa7.53□□□□□ -1.2
PMS1-203ENST00000409593 LENG1Q96BZ8 264 aaPredicted RBP7.53□□□□□ -1.2
PMS1-203ENST00000409593 BHLHE41Q9C0J9 482 aaPredicted RBP7.53□□□□□ -1.2
PMS1-203ENST00000409593 PNMA6FA0A0J9YX94 578 aa7.52□□□□□ -1.21
PMS1-203ENST00000409593 DLL1O00548 723 aa7.52□□□□□ -1.21
PMS1-203ENST00000409593 MAPK8P45983 427 aa7.52□□□□□ -1.21
PMS1-203ENST00000409593 PLCB3Q01970 1234 aa7.52□□□□□ -1.21
PMS1-203ENST00000409593 MBTPS1Q14703 1052 aa7.52□□□□□ -1.21
PMS1-203ENST00000409593 IGF2-ASQ6U949 168 aa7.52□□□□□ -1.21
PMS1-203ENST00000409593 GALNT11Q8NCW6 608 aa7.52□□□□□ -1.21
PMS1-203ENST00000409593 ASB16Q96NS5 453 aa7.52□□□□□ -1.21
PMS1-203ENST00000409593 SOX13Q9UN79 622 aa7.52□□□□□ -1.21
PMS1-203ENST00000409593 DSC3Q14574 896 aa7.51□□□□□ -1.21
PMS1-203ENST00000409593 SEC31BQ9NQW1 1179 aa7.51□□□□□ -1.21
PMS1-203ENST00000409593 CD68P34810 354 aaPredicted RBP7.51□□□□□ -1.21
PMS1-203ENST00000409593 IKBKEQ14164 716 aa7.51□□□□□ -1.21
PMS1-203ENST00000409593 ADGRE1Q14246 886 aa7.51□□□□□ -1.21
PMS1-203ENST00000409593 FOXD4L6Q3SYB3 417 aaPredicted RBP7.51□□□□□ -1.21
PMS1-203ENST00000409593 FOXD4L3Q6VB84 417 aaPredicted RBP7.51□□□□□ -1.21
PMS1-203ENST00000409593 CCNJLQ8IV13 435 aa7.51□□□□□ -1.21
PMS1-203ENST00000409593 EPS8L3Q8TE67 593 aaKnown RBP7.51□□□□□ -1.21
PMS1-203ENST00000409593 PSMG3-AS1Q96PY0 264 aa7.51□□□□□ -1.21
PMS1-203ENST00000409593 A0A096LPE4 126 aa7.5□□□□□ -1.21
PMS1-203ENST00000409593 A0A1W2PPZ6 126 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms