RNA–Protein interactions for RNA: ENST00000409532.5

ITGA6-203, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 3,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-203ENST00000409532 CCDC73Q6ZRK6 1079 aa13.2□□□□□ -0.3
ITGA6-203ENST00000409532 FILIP1Q7Z7B0 1213 aa13.2□□□□□ -0.3
ITGA6-203ENST00000409532 CCDC144CPQ8IYA2 1237 aa13.2□□□□□ -0.3
ITGA6-203ENST00000409532 SYNE4Q8N205 404 aa13.2□□□□□ -0.3
ITGA6-203ENST00000409532 ZNF592Q92610 1267 aa13.2□□□□□ -0.3
ITGA6-203ENST00000409532 FAM89AQ96GI7 184 aa13.2□□□□□ -0.3
ITGA6-203ENST00000409532 MAP7D2Q96T17 732 aa13.2□□□□□ -0.3
ITGA6-203ENST00000409532 STRN4Q9NRL3 753 aa13.2□□□□□ -0.3
ITGA6-203ENST00000409532 CEP126Q9P2H0 1117 aa13.2□□□□□ -0.3
ITGA6-203ENST00000409532 BECN2A8MW95 431 aa13.19□□□□□ -0.3
ITGA6-203ENST00000409532 PDIA3P30101 505 aaKnown RBP13.19□□□□□ -0.3
ITGA6-203ENST00000409532 ADD1P35611 737 aaKnown RBP13.19□□□□□ -0.3
ITGA6-203ENST00000409532 IL15P40933 162 aaPredicted RBP13.19□□□□□ -0.3
ITGA6-203ENST00000409532 TAF7LQ5H9L4 462 aa13.19□□□□□ -0.3
ITGA6-203ENST00000409532 ZMYM1Q5SVZ6 1142 aa13.19□□□□□ -0.3
ITGA6-203ENST00000409532 FSIP1Q8NA03 581 aa13.19□□□□□ -0.3
ITGA6-203ENST00000409532 PHRF1Q9P1Y6 1649 aaKnown RBP13.19□□□□□ -0.3
ITGA6-203ENST00000409532 RNF113AO15541 343 aaKnown RBP13.19□□□□□ -0.3
ITGA6-203ENST00000409532 SMARCC2Q8TAQ2 1214 aa13.19□□□□□ -0.3
ITGA6-203ENST00000409532 BCL2L12Q9HB09 334 aa13.19□□□□□ -0.3
ITGA6-203ENST00000409532 PRDM11Q9NQV5 511 aa13.19□□□□□ -0.3
ITGA6-203ENST00000409532 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.19□□□□□ -0.38e-7■■□□□ 12.4
ITGA6-203ENST00000409532 SCN11AQ9UI33 1791 aa13.19□□□□□ -0.3
ITGA6-203ENST00000409532 SH3TC1Q8TE82 1336 aa13.19□□□□□ -0.3
ITGA6-203ENST00000409532 A0A1B0GVL5 298 aa13.19□□□□□ -0.3
ITGA6-203ENST00000409532 KINO60870 393 aaKnown RBP13.19□□□□□ -0.3
ITGA6-203ENST00000409532 SCARF1Q14162 830 aa13.19□□□□□ -0.3
ITGA6-203ENST00000409532 CACTINQ8WUQ7 758 aaKnown RBP13.19□□□□□ -0.3
ITGA6-203ENST00000409532 CCDC57Q2TAC2 916 aa13.18□□□□□ -0.3
ITGA6-203ENST00000409532 TTC39AQ5SRH9 613 aa13.18□□□□□ -0.3
ITGA6-203ENST00000409532 ZSCAN25Q6NSZ9 544 aa13.18□□□□□ -0.3
ITGA6-203ENST00000409532 HELLSQ9NRZ9 838 aa13.18□□□□□ -0.3
ITGA6-203ENST00000409532 HMGB1P09429 215 aaKnown RBP13.18□□□□□ -0.3
ITGA6-203ENST00000409532 EXOSC10Q01780 885 aaKnown RBP13.18□□□□□ -0.3
ITGA6-203ENST00000409532 ZCRB1Q8TBF4 217 aaKnown RBP13.18□□□□□ -0.3
ITGA6-203ENST00000409532 SDF4Q9BRK5 362 aa13.18□□□□□ -0.3
ITGA6-203ENST00000409532 TMEM94Q12767 1356 aa13.18□□□□□ -0.3
ITGA6-203ENST00000409532 TPM3P06753 285 aa13.18□□□□□ -0.3
ITGA6-203ENST00000409532 SF3A1Q15459 793 aaKnown RBP13.18□□□□□ -0.3
ITGA6-203ENST00000409532 DSCC1Q9BVC3 393 aa13.18□□□□□ -0.3
ITGA6-203ENST00000409532 GPTP24298 496 aa13.17□□□□□ -0.3
ITGA6-203ENST00000409532 ISM2Q6H9L7 571 aa13.17□□□□□ -0.3
ITGA6-203ENST00000409532 TDRD7Q8NHU6 1098 aaKnown RBP13.17□□□□□ -0.3
ITGA6-203ENST00000409532 BIN1O00499 593 aa13.17□□□□□ -0.3
ITGA6-203ENST00000409532 RXRAP19793 462 aa13.17□□□□□ -0.3
ITGA6-203ENST00000409532 CBX1P83916 185 aa13.17□□□□□ -0.3
ITGA6-203ENST00000409532 PLA2G4DQ86XP0 818 aa13.17□□□□□ -0.3
ITGA6-203ENST00000409532 DENND2AQ9ULE3 1009 aa13.17□□□□□ -0.3
ITGA6-203ENST00000409532 ZAP70P43403 619 aa13.17□□□□□ -0.3
ITGA6-203ENST00000409532 TPD52L1Q16890 204 aaPredicted RBP13.17□□□□□ -0.3
ITGA6-203ENST00000409532 RBM43Q6ZSC3 357 aaKnown RBP13.17□□□□□ -0.3
ITGA6-203ENST00000409532 ILDR1Q86SU0 546 aaPredicted RBP13.17□□□□□ -0.3
ITGA6-203ENST00000409532 XAGE2Q96GT9 111 aa13.17□□□□□ -0.3
ITGA6-203ENST00000409532 RCOR1Q9UKL0 485 aa13.17□□□□□ -0.3
ITGA6-203ENST00000409532 KLF18A0A0U1RQI7 1052 aa13.16□□□□□ -0.3
ITGA6-203ENST00000409532 SPDYE4A6NLX3 237 aa13.16□□□□□ -0.3
ITGA6-203ENST00000409532 FDPSP14324 419 aaKnown RBP13.16□□□□□ -0.3
ITGA6-203ENST00000409532 CCDC158Q5M9N0 1113 aa13.16□□□□□ -0.3
ITGA6-203ENST00000409532 LLPHQ9BRT6 129 aaKnown RBP13.16□□□□□ -0.3
ITGA6-203ENST00000409532 MRC1P22897 1456 aa13.16□□□□□ -0.3
ITGA6-203ENST00000409532 FGAP02671 866 aa13.16□□□□□ -0.3
ITGA6-203ENST00000409532 TNNT1P13805 278 aa13.16□□□□□ -0.3
ITGA6-203ENST00000409532 SNW1Q13573 536 aaKnown RBP13.16□□□□□ -0.3
ITGA6-203ENST00000409532 NAA30Q147X3 362 aaPredicted RBP13.16□□□□□ -0.3
ITGA6-203ENST00000409532 PUS7LQ9H0K6 701 aaKnown RBP13.16□□□□□ -0.3
ITGA6-203ENST00000409532 TRPM3Q9HCF6 1732 aaPredicted RBP13.16□□□□□ -0.3
ITGA6-203ENST00000409532 GOLGA8BA8MQT2 603 aa13.16□□□□□ -0.3
ITGA6-203ENST00000409532 PPP4R3BQ5MIZ7 849 aa13.16□□□□□ -0.3
ITGA6-203ENST00000409532 NAA16Q6N069 864 aaPredicted RBP13.16□□□□□ -0.3
ITGA6-203ENST00000409532 AOPEPQ8N6M6 819 aa13.16□□□□□ -0.3
ITGA6-203ENST00000409532 ZNF396Q96N95 335 aaPredicted RBP13.16□□□□□ -0.3
ITGA6-203ENST00000409532 TRMT1Q9NXH9 659 aaKnown RBP13.16□□□□□ -0.3
ITGA6-203ENST00000409532 PCDHA7Q9UN72 937 aa13.16□□□□□ -0.3
ITGA6-203ENST00000409532 CLIC4Q9Y696 253 aa13.16□□□□□ -0.3
ITGA6-203ENST00000409532 CPLX1O14810 134 aa13.15□□□□□ -0.3
ITGA6-203ENST00000409532 APPP05067 770 aa13.15□□□□□ -0.3
ITGA6-203ENST00000409532 IQCB1Q15051 598 aa13.15□□□□□ -0.3
ITGA6-203ENST00000409532 STK38Q15208 465 aa13.15□□□□□ -0.3
ITGA6-203ENST00000409532 CARMIL3Q8ND23 1372 aa13.15□□□□□ -0.3
ITGA6-203ENST00000409532 PRC1O43663 620 aa13.15□□□□□ -0.3
ITGA6-203ENST00000409532 CCDC191Q8NCU4 936 aa13.15□□□□□ -0.3
ITGA6-203ENST00000409532 PALLDQ8WX93 1383 aa13.15□□□□□ -0.3
ITGA6-203ENST00000409532 ARFGEF2Q9Y6D5 1785 aa13.15□□□□□ -0.3
ITGA6-203ENST00000409532 STX1AQ16623 288 aa13.14□□□□□ -0.31
ITGA6-203ENST00000409532 C8orf76Q96K31 380 aa13.14□□□□□ -0.31
ITGA6-203ENST00000409532 ORC3Q9UBD5 711 aaPredicted RBP13.14□□□□□ -0.31
ITGA6-203ENST00000409532 USP27XA6NNY8 438 aa13.14□□□□□ -0.31
ITGA6-203ENST00000409532 IMMTQ16891 758 aaKnown RBP13.14□□□□□ -0.31
ITGA6-203ENST00000409532 AIFM3Q96NN9 605 aa13.14□□□□□ -0.31
ITGA6-203ENST00000409532 LAMA4Q16363 1823 aa13.14□□□□□ -0.31
ITGA6-203ENST00000409532 NDUFA8P51970 172 aa13.14□□□□□ -0.31
ITGA6-203ENST00000409532 FAM160A1Q05DH4 1040 aa13.14□□□□□ -0.31
ITGA6-203ENST00000409532 MTERF4Q7Z6M4 381 aaKnown RBP13.14□□□□□ -0.31
ITGA6-203ENST00000409532 RALYLQ86SE5 291 aaKnown RBP13.14□□□□□ -0.31
ITGA6-203ENST00000409532 ZRSR1Q15695 479 aaKnown RBP13.13□□□□□ -0.31
ITGA6-203ENST00000409532 STK11IPQ8N1F8 1099 aa13.13□□□□□ -0.31
ITGA6-203ENST00000409532 SYTL4Q96C24 671 aaPredicted RBP13.13□□□□□ -0.31
ITGA6-203ENST00000409532 FOXP2O15409 715 aa13.13□□□□□ -0.31
ITGA6-203ENST00000409532 MARCKSP29966 332 aaPredicted RBP13.13□□□□□ -0.31
ITGA6-203ENST00000409532 A0A0G2JS52 829 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms