RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 NUCB1Q02818 461 aa17.36■□□□□ 0.37
CHRNA1-204ENST00000409323 CLASRPQ8N2M8 674 aaKnown RBP17.36■□□□□ 0.37
CHRNA1-204ENST00000409323 PODXL2Q9NZ53 605 aa17.36■□□□□ 0.37
CHRNA1-204ENST00000409323 ZBTB47Q9UFB7 747 aaPredicted RBP17.36■□□□□ 0.37
CHRNA1-204ENST00000409323 UTRNP46939 3433 aa17.36■□□□□ 0.37
CHRNA1-204ENST00000409323 CCDC88AQ3V6T2 1871 aa17.36■□□□□ 0.37
CHRNA1-204ENST00000409323 ATP2B4P23634 1241 aa17.36■□□□□ 0.37
CHRNA1-204ENST00000409323 AOC3Q16853 763 aa17.36■□□□□ 0.37
CHRNA1-204ENST00000409323 CHD1LQ86WJ1 897 aa17.36■□□□□ 0.37
CHRNA1-204ENST00000409323 SLC5A1P13866 664 aa17.35■□□□□ 0.37
CHRNA1-204ENST00000409323 RTKN2Q8IZC4 609 aa17.35■□□□□ 0.37
CHRNA1-204ENST00000409323 LPIN2Q92539 896 aa17.35■□□□□ 0.37
CHRNA1-204ENST00000409323 XAGE2Q96GT9 111 aa17.35■□□□□ 0.37
CHRNA1-204ENST00000409323 DBNLQ9UJU6 430 aaKnown RBP17.35■□□□□ 0.37
CHRNA1-204ENST00000409323 IQSEC3Q9UPP2 1182 aaPredicted RBP17.35■□□□□ 0.37
CHRNA1-204ENST00000409323 AKAP2Q9Y2D5 859 aa17.35■□□□□ 0.37
CHRNA1-204ENST00000409323 IFIT2P09913 472 aaKnown RBP17.34■□□□□ 0.37
CHRNA1-204ENST00000409323 PDE4AP27815 886 aa17.34■□□□□ 0.37
CHRNA1-204ENST00000409323 BCAMP50895 628 aa17.34■□□□□ 0.37
CHRNA1-204ENST00000409323 PRELPP51888 382 aa17.34■□□□□ 0.37
CHRNA1-204ENST00000409323 UBE4AQ14139 1066 aa17.34■□□□□ 0.37
CHRNA1-204ENST00000409323 DOK7Q18PE1 504 aa17.34■□□□□ 0.37
CHRNA1-204ENST00000409323 CC2D2BQ6DHV5 1058 aa17.34■□□□□ 0.37
CHRNA1-204ENST00000409323 TAOK3Q9H2K8 898 aa17.34■□□□□ 0.37
CHRNA1-204ENST00000409323 LEMD3Q9Y2U8 911 aa17.34■□□□□ 0.37
CHRNA1-204ENST00000409323 ARAP2Q8WZ64 1704 aa17.33■□□□□ 0.37
CHRNA1-204ENST00000409323 IFIT1P09914 478 aaKnown RBP17.33■□□□□ 0.37
CHRNA1-204ENST00000409323 FKBP4Q02790 459 aaKnown RBP eCLIP17.33■□□□□ 0.37
CHRNA1-204ENST00000409323 WASHC4Q2M389 1173 aa17.33■□□□□ 0.37
CHRNA1-204ENST00000409323 SOGA3Q5TF21 947 aa17.33■□□□□ 0.37
CHRNA1-204ENST00000409323 IRS2Q9Y4H2 1338 aa17.32■□□□□ 0.36
CHRNA1-204ENST00000409323 PPIP5K2O43314 1243 aa17.32■□□□□ 0.36
CHRNA1-204ENST00000409323 PHKA1P46020 1223 aa17.32■□□□□ 0.36
CHRNA1-204ENST00000409323 GORABQ5T7V8 394 aa17.32■□□□□ 0.36
CHRNA1-204ENST00000409323 DBNDD1Q9H9R9 158 aa17.32■□□□□ 0.36
CHRNA1-204ENST00000409323 JAG2Q9Y219 1238 aa17.32■□□□□ 0.36
CHRNA1-204ENST00000409323 COL4A5P29400 1685 aa17.32■□□□□ 0.36
CHRNA1-204ENST00000409323 FAM84BQ96KN1 310 aaPredicted RBP17.32■□□□□ 0.36
CHRNA1-204ENST00000409323 RTFDC1Q9BY42 306 aaPredicted RBP17.32■□□□□ 0.36
CHRNA1-204ENST00000409323 ZC3H12CQ9C0D7 883 aaKnown RBP17.32■□□□□ 0.36
CHRNA1-204ENST00000409323 GPR108Q9NPR9 543 aa17.32■□□□□ 0.36
CHRNA1-204ENST00000409323 CHD4Q14839 1912 aa17.31■□□□□ 0.36
CHRNA1-204ENST00000409323 RGS3P49796 1198 aa17.31■□□□□ 0.36
CHRNA1-204ENST00000409323 VPS37DQ86XT2 251 aa17.31■□□□□ 0.36
CHRNA1-204ENST00000409323 PSMD1Q99460 953 aa17.31■□□□□ 0.36
CHRNA1-204ENST00000409323 NDUFB9Q9Y6M9 179 aa17.31■□□□□ 0.36
CHRNA1-204ENST00000409323 CCDC102BQ68D86 513 aa17.3■□□□□ 0.36
CHRNA1-204ENST00000409323 LARGE2Q8N3Y3 721 aa17.3■□□□□ 0.36
CHRNA1-204ENST00000409323 MED23Q9ULK4 1368 aa17.3■□□□□ 0.36
CHRNA1-204ENST00000409323 G3V3G9 751 aa17.29■□□□□ 0.36
CHRNA1-204ENST00000409323 IARSP41252 1262 aaKnown RBP17.29■□□□□ 0.36
CHRNA1-204ENST00000409323 SCARF1Q14162 830 aa17.29■□□□□ 0.36
CHRNA1-204ENST00000409323 DCAF8Q5TAQ9 597 aa17.29■□□□□ 0.36
CHRNA1-204ENST00000409323 PI16Q6UXB8 463 aa17.29■□□□□ 0.36
CHRNA1-204ENST00000409323 SUPT20HQ8NEM7 779 aa17.29■□□□□ 0.36
CHRNA1-204ENST00000409323 EYA3Q99504 573 aa17.29■□□□□ 0.36
CHRNA1-204ENST00000409323 KCNQ5Q9NR82 932 aa17.29■□□□□ 0.36
CHRNA1-204ENST00000409323 SBF1O95248 1867 aa17.29■□□□□ 0.36
CHRNA1-204ENST00000409323 HIBADHP31937 336 aaKnown RBP17.28■□□□□ 0.36
CHRNA1-204ENST00000409323 KIAA2012Q0VF49 1180 aa17.28■□□□□ 0.36
CHRNA1-204ENST00000409323 CAVIN4Q5BKX8 364 aa17.28■□□□□ 0.36
CHRNA1-204ENST00000409323 TTC39AQ5SRH9 613 aa17.28■□□□□ 0.36
CHRNA1-204ENST00000409323 FBXW7Q969H0 707 aa17.28■□□□□ 0.36
CHRNA1-204ENST00000409323 SNRKQ9NRH2 765 aa17.28■□□□□ 0.36
CHRNA1-204ENST00000409323 MYH13Q9UKX3 1938 aa17.28■□□□□ 0.36
CHRNA1-204ENST00000409323 MAP4K4O95819 1239 aaPredicted RBP17.28■□□□□ 0.36
CHRNA1-204ENST00000409323 MX1P20591 662 aa17.28■□□□□ 0.36
CHRNA1-204ENST00000409323 FBXO33Q7Z6M2 555 aa17.28■□□□□ 0.36
CHRNA1-204ENST00000409323 PLEKHM2Q8IWE5 1019 aa17.28■□□□□ 0.36
CHRNA1-204ENST00000409323 SCN9AQ15858 1988 aa17.27■□□□□ 0.36
CHRNA1-204ENST00000409323 SALL3Q9BXA9 1300 aa17.27■□□□□ 0.36
CHRNA1-204ENST00000409323 ECE2O60344 883 aa17.27■□□□□ 0.35
CHRNA1-204ENST00000409323 FRAT2O75474 233 aaPredicted RBP17.27■□□□□ 0.35
CHRNA1-204ENST00000409323 CHAF1AQ13111 956 aaPredicted RBP17.27■□□□□ 0.35
CHRNA1-204ENST00000409323 GRIPAP1Q4V328 841 aa17.27■□□□□ 0.35
CHRNA1-204ENST00000409323 CCDC158Q5M9N0 1113 aa17.27■□□□□ 0.35
CHRNA1-204ENST00000409323 ZNF804AQ7Z570 1209 aa17.27■□□□□ 0.35
CHRNA1-204ENST00000409323 BOLA2Q9H3K6 86 aa17.27■□□□□ 0.35
CHRNA1-204ENST00000409323 CD209Q9NNX6 404 aa17.27■□□□□ 0.35
CHRNA1-204ENST00000409323 COL1A1P02452 1464 aaPredicted RBP17.26■□□□□ 0.35
CHRNA1-204ENST00000409323 YDJCA8MPS7 323 aa17.26■□□□□ 0.35
CHRNA1-204ENST00000409323 PDE1AP54750 535 aa17.26■□□□□ 0.35
CHRNA1-204ENST00000409323 EDC3Q96F86 508 aaKnown RBP17.26■□□□□ 0.35
CHRNA1-204ENST00000409323 LTBP3Q9NS15 1303 aa17.25■□□□□ 0.35
CHRNA1-204ENST00000409323 MCAMP43121 646 aa17.25■□□□□ 0.35
CHRNA1-204ENST00000409323 RASGRF1Q13972 1273 aa17.25■□□□□ 0.35
CHRNA1-204ENST00000409323 C15orf52Q6ZUT6 534 aaKnown RBP17.25■□□□□ 0.35
CHRNA1-204ENST00000409323 DNAJC2Q99543 621 aaKnown RBP17.25■□□□□ 0.35
CHRNA1-204ENST00000409323 MXD3Q9BW11 206 aa17.25■□□□□ 0.35
CHRNA1-204ENST00000409323 ECHDC1Q9NTX5 307 aa17.25■□□□□ 0.35
CHRNA1-204ENST00000409323 RNF181Q9P0P0 153 aa17.25■□□□□ 0.35
CHRNA1-204ENST00000409323 AKAP11Q9UKA4 1901 aa17.24■□□□□ 0.35
CHRNA1-204ENST00000409323 NIM1KQ8IY84 436 aa17.24■□□□□ 0.35
CHRNA1-204ENST00000409323 GRIN3BO60391 1043 aa17.23■□□□□ 0.35
CHRNA1-204ENST00000409323 RAD17O75943 681 aa17.23■□□□□ 0.35
CHRNA1-204ENST00000409323 LMNB1P20700 586 aa17.23■□□□□ 0.35
CHRNA1-204ENST00000409323 C9orf131Q5VYM1 1079 aa17.23■□□□□ 0.35
CHRNA1-204ENST00000409323 PI4K2BQ8TCG2 481 aa17.23■□□□□ 0.35
CHRNA1-204ENST00000409323 GPATCH3Q96I76 525 aa17.23■□□□□ 0.35
CHRNA1-204ENST00000409323 COA1Q9GZY4 146 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms