RNA–Protein interactions for RNA: ENST00000409299.7

PXMP4-203, Transcript of peroxisomal membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PXMP4, Length 5,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-203ENST00000409299 CCDC175P0C221 793 aa13.93□□□□□ -0.18
PXMP4-203ENST00000409299 XRCC6P12956 609 aaKnown RBP eCLIP13.93□□□□□ -0.18
PXMP4-203ENST00000409299 UBA7P41226 1012 aa13.93□□□□□ -0.18
PXMP4-203ENST00000409299 NBPF7P0C2Y1 421 aaPredicted RBP13.92□□□□□ -0.18
PXMP4-203ENST00000409299 HSF2BPO75031 334 aa13.92□□□□□ -0.18
PXMP4-203ENST00000409299 BAG6P46379 1132 aa13.92□□□□□ -0.18
PXMP4-203ENST00000409299 NAA16Q6N069 864 aaPredicted RBP13.92□□□□□ -0.18
PXMP4-203ENST00000409299 BBXQ8WY36 941 aaPredicted RBP13.92□□□□□ -0.18
PXMP4-203ENST00000409299 SLC26A6Q9BXS9 759 aa13.92□□□□□ -0.18
PXMP4-203ENST00000409299 BIN1O00499 593 aa13.92□□□□□ -0.18
PXMP4-203ENST00000409299 GIMAP6Q6P9H5 292 aa13.92□□□□□ -0.18
PXMP4-203ENST00000409299 EXOC1Q9NV70 894 aa13.92□□□□□ -0.18
PXMP4-203ENST00000409299 CNPY2Q9Y2B0 182 aa13.92□□□□□ -0.18
PXMP4-203ENST00000409299 RBM8AQ9Y5S9 174 aaKnown RBP13.92□□□□□ -0.18
PXMP4-203ENST00000409299 IL15P40933 162 aaPredicted RBP13.92□□□□□ -0.18
PXMP4-203ENST00000409299 CCDC144CPQ8IYA2 1237 aa13.92□□□□□ -0.18
PXMP4-203ENST00000409299 GOPCQ9HD26 462 aa13.92□□□□□ -0.18
PXMP4-203ENST00000409299 NEO1Q92859 1461 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 GSTTP1A0A1W2PQM5 241 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 TSHZ3Q63HK5 1081 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 TRMT1LQ7Z2T5 733 aaKnown RBP13.91□□□□□ -0.18
PXMP4-203ENST00000409299 MPHOSPH6Q99547 160 aaKnown RBP13.91□□□□□ -0.18
PXMP4-203ENST00000409299 CCDC113Q9H0I3 377 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 STX8Q9UNK0 236 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 TRAF1Q13077 416 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 TMEM87AQ8NBN3 555 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 DCTPP1Q9H773 170 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 GJA3Q9Y6H8 435 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 TSPY3P0CV98 308 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 TSPY8P0CW00 308 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 PRIM1P49642 420 aaKnown RBP13.91□□□□□ -0.18
PXMP4-203ENST00000409299 WTAPQ15007 396 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 HOOK3Q86VS8 718 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 KLF18A0A0U1RQI7 1052 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 CTAGE15A4D2H0 777 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 N4BP3O15049 544 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 ZBTB43O43298 467 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 STAMBPO95630 424 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 CTAGE8P0CG41 777 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 SKILP12757 684 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 CTAGE6Q86UF2 777 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 CTAGE4Q8IX94 777 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 HELBQ8NG08 1087 aaPredicted RBP13.91□□□□□ -0.18
PXMP4-203ENST00000409299 MEIS3Q99687 375 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 UBA5Q9GZZ9 404 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 SLC4A4Q9Y6R1 1079 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 TMEM2Q9UHN6 1383 aa13.91□□□□□ -0.18
PXMP4-203ENST00000409299 GNAQP50148 359 aa13.9□□□□□ -0.18
PXMP4-203ENST00000409299 BRF1Q92994 677 aa13.9□□□□□ -0.18
PXMP4-203ENST00000409299 TUBBP07437 444 aa13.9□□□□□ -0.18
PXMP4-203ENST00000409299 ANKRD2Q9GZV1 360 aa13.9□□□□□ -0.18
PXMP4-203ENST00000409299 TRIM47Q96LD4 638 aa13.9□□□□□ -0.18
PXMP4-203ENST00000409299 PRDM10Q9NQV6 1147 aa13.9□□□□□ -0.18
PXMP4-203ENST00000409299 PRPHP41219 470 aa13.9□□□□□ -0.18
PXMP4-203ENST00000409299 HLTFQ14527 1009 aaKnown RBP eCLIP13.9□□□□□ -0.18
PXMP4-203ENST00000409299 RNF187Q5TA31 235 aaPredicted RBP13.9□□□□□ -0.18
PXMP4-203ENST00000409299 MICU3Q86XE3 530 aa13.9□□□□□ -0.18
PXMP4-203ENST00000409299 ERMNQ8TAM6 284 aa13.9□□□□□ -0.18
PXMP4-203ENST00000409299 ALG1Q9BT22 464 aa13.9□□□□□ -0.18
PXMP4-203ENST00000409299 LIG1P18858 919 aa13.89□□□□□ -0.19
PXMP4-203ENST00000409299 GTF2F1P35269 517 aaKnown RBP eCLIP13.89□□□□□ -0.192e-8■■■■■ 34.1
PXMP4-203ENST00000409299 ARFGAP3Q9NP61 516 aa13.89□□□□□ -0.19
PXMP4-203ENST00000409299 RTL9Q8NET4 1388 aa13.89□□□□□ -0.19
PXMP4-203ENST00000409299 CALM1P0DP23 149 aa13.89□□□□□ -0.19
PXMP4-203ENST00000409299 CALM2P0DP24 149 aa13.89□□□□□ -0.19
PXMP4-203ENST00000409299 CALM3P0DP25 149 aa13.89□□□□□ -0.19
PXMP4-203ENST00000409299 LINS1Q8NG48 757 aa13.89□□□□□ -0.19
PXMP4-203ENST00000409299 PLVAPQ9BX97 442 aa13.89□□□□□ -0.19
PXMP4-203ENST00000409299 RTL1A6NKG5 1358 aa13.89□□□□□ -0.19
PXMP4-203ENST00000409299 SLU7O95391 586 aaKnown RBP13.89□□□□□ -0.19
PXMP4-203ENST00000409299 CWF19L2Q2TBE0 894 aaKnown RBP13.89□□□□□ -0.19
PXMP4-203ENST00000409299 KAT6BQ8WYB5 2073 aa13.89□□□□□ -0.19
PXMP4-203ENST00000409299 NPC1L1Q9UHC9 1359 aa13.89□□□□□ -0.19
PXMP4-203ENST00000409299 SPDYE4A6NLX3 237 aa13.88□□□□□ -0.19
PXMP4-203ENST00000409299 OPA1O60313 960 aa13.88□□□□□ -0.19
PXMP4-203ENST00000409299 SPECC1Q5M775 1068 aa13.88□□□□□ -0.19
PXMP4-203ENST00000409299 ESR2Q92731 530 aa13.88□□□□□ -0.19
PXMP4-203ENST00000409299 JADE2Q9NQC1 790 aa13.88□□□□□ -0.19
PXMP4-203ENST00000409299 ZMYM4Q5VZL5 1548 aa13.88□□□□□ -0.19
PXMP4-203ENST00000409299 GNAT2P19087 354 aa13.88□□□□□ -0.19
PXMP4-203ENST00000409299 RRAGBQ5VZM2 374 aa13.88□□□□□ -0.19
PXMP4-203ENST00000409299 BRAPQ7Z569 592 aa13.88□□□□□ -0.19
PXMP4-203ENST00000409299 TIGD1Q96MW7 591 aa13.88□□□□□ -0.19
PXMP4-203ENST00000409299 TMCO5BA8MYB1 307 aa13.88□□□□□ -0.19
PXMP4-203ENST00000409299 LTKP29376 864 aa13.88□□□□□ -0.19
PXMP4-203ENST00000409299 KRT83P78385 493 aa13.88□□□□□ -0.19
PXMP4-203ENST00000409299 RTN1Q16799 776 aa13.88□□□□□ -0.19
PXMP4-203ENST00000409299 SAMM50Q9Y512 469 aa13.88□□□□□ -0.19
PXMP4-203ENST00000409299 ECM2O94769 699 aaPredicted RBP13.88□□□□□ -0.19
PXMP4-203ENST00000409299 LMAN1P49257 510 aa13.88□□□□□ -0.19
PXMP4-203ENST00000409299 Q6ZUG5 572 aa13.88□□□□□ -0.19
PXMP4-203ENST00000409299 CCDC186Q7Z3E2 898 aa13.88□□□□□ -0.19
PXMP4-203ENST00000409299 MAATS1Q7Z4T9 603 aa13.88□□□□□ -0.19
PXMP4-203ENST00000409299 LARP6Q9BRS8 491 aaKnown RBP13.88□□□□□ -0.19
PXMP4-203ENST00000409299 BCCIPQ9P287 314 aaKnown RBP eCLIP13.88□□□□□ -0.19
PXMP4-203ENST00000409299 ABCA5Q8WWZ7 1642 aa13.87□□□□□ -0.19
PXMP4-203ENST00000409299 RAB11FIP4Q86YS3 637 aa13.87□□□□□ -0.19
PXMP4-203ENST00000409299 SELENOOQ9BVL4 669 aa13.87□□□□□ -0.19
PXMP4-203ENST00000409299 NSRP1Q9H0G5 558 aaKnown RBP13.87□□□□□ -0.19
PXMP4-203ENST00000409299 JAG2Q9Y219 1238 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms