RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 SULF1Q8IWU6 871 aa10.08□□□□□ -0.8
LSM5-202ENST00000409292 XAGE3Q8WTP9 111 aa10.08□□□□□ -0.8
LSM5-202ENST00000409292 GBA2Q9HCG7 927 aaPredicted RBP10.08□□□□□ -0.8
LSM5-202ENST00000409292 KDM3BQ7LBC6 1761 aa10.08□□□□□ -0.8
LSM5-202ENST00000409292 THSD7BQ9C0I4 1608 aa10.07□□□□□ -0.8
LSM5-202ENST00000409292 ZNF157P51786 506 aaPredicted RBP10.07□□□□□ -0.8
LSM5-202ENST00000409292 KHSRPQ92945 711 aaKnown RBP eCLIP10.07□□□□□ -0.8
LSM5-202ENST00000409292 PLEKHF1Q96S99 279 aa10.07□□□□□ -0.8
LSM5-202ENST00000409292 CHMP4AQ9BY43 222 aa10.07□□□□□ -0.8
LSM5-202ENST00000409292 ZC3H12CQ9C0D7 883 aaKnown RBP10.07□□□□□ -0.8
LSM5-202ENST00000409292 SAGE1Q9NXZ1 904 aa10.07□□□□□ -0.8
LSM5-202ENST00000409292 LTBP1Q14766 1721 aa10.07□□□□□ -0.8
LSM5-202ENST00000409292 RBM26Q5T8P6 1007 aaKnown RBP10.06□□□□□ -0.8
LSM5-202ENST00000409292 PLBD2Q8NHP8 589 aa10.06□□□□□ -0.8
LSM5-202ENST00000409292 TRPM4Q8TD43 1214 aa10.06□□□□□ -0.8
LSM5-202ENST00000409292 NECTIN2Q92692 538 aa10.06□□□□□ -0.8
LSM5-202ENST00000409292 LAS1LQ9Y4W2 734 aaKnown RBP10.06□□□□□ -0.8
LSM5-202ENST00000409292 COL4A5P29400 1685 aa10.06□□□□□ -0.8
LSM5-202ENST00000409292 NUDT7P0C024 238 aa10.05□□□□□ -0.8
LSM5-202ENST00000409292 HIRAP54198 1017 aaPredicted RBP10.05□□□□□ -0.8
LSM5-202ENST00000409292 PDIA6Q15084 440 aa10.05□□□□□ -0.8
LSM5-202ENST00000409292 TBC1D10BQ4KMP7 808 aaPredicted RBP10.05□□□□□ -0.8
LSM5-202ENST00000409292 HDGFL1Q5TGJ6 251 aa10.05□□□□□ -0.8
LSM5-202ENST00000409292 ANKRD13DQ6ZTN6 518 aa10.05□□□□□ -0.8
LSM5-202ENST00000409292 PLPP6Q8IY26 295 aa10.05□□□□□ -0.8
LSM5-202ENST00000409292 DBNDD1Q9H9R9 158 aa10.05□□□□□ -0.8
LSM5-202ENST00000409292 HYPKQ9NX55 129 aa10.05□□□□□ -0.8
LSM5-202ENST00000409292 DBF4Q9UBU7 674 aaPredicted RBP10.05□□□□□ -0.8
LSM5-202ENST00000409292 DLG5Q8TDM6 1919 aa10.04□□□□□ -0.8
LSM5-202ENST00000409292 PSMD14O00487 310 aa10.04□□□□□ -0.8
LSM5-202ENST00000409292 ECE2O60344 883 aa10.04□□□□□ -0.8
LSM5-202ENST00000409292 ANXA1P04083 346 aa10.04□□□□□ -0.8
LSM5-202ENST00000409292 HOXB7P09629 217 aa10.04□□□□□ -0.8
LSM5-202ENST00000409292 FKBP1BP68106 108 aa10.04□□□□□ -0.8
LSM5-202ENST00000409292 KIF23Q02241 960 aaPredicted RBP10.04□□□□□ -0.8
LSM5-202ENST00000409292 WDR43Q15061 677 aaKnown RBP eCLIP10.04□□□□□ -0.8
LSM5-202ENST00000409292 RALBP1Q15311 655 aa10.04□□□□□ -0.8
LSM5-202ENST00000409292 SF3B3Q15393 1217 aaKnown RBP10.04□□□□□ -0.8
LSM5-202ENST00000409292 KIF4BQ2VIQ3 1234 aa10.04□□□□□ -0.8
LSM5-202ENST00000409292 SAMD7Q7Z3H4 446 aa10.04□□□□□ -0.8
LSM5-202ENST00000409292 PTCD2Q8WV60 388 aaKnown RBP10.04□□□□□ -0.8
LSM5-202ENST00000409292 ANKIB1Q9P2G1 1089 aa10.04□□□□□ -0.8
LSM5-202ENST00000409292 HDAC9Q9UKV0 1011 aa10.04□□□□□ -0.8
LSM5-202ENST00000409292 GTPBP6O43824 516 aaPredicted RBP10.03□□□□□ -0.8
LSM5-202ENST00000409292 TMPOP42166 694 aaKnown RBP10.03□□□□□ -0.8
LSM5-202ENST00000409292 RPS8P62241 208 aaKnown RBP10.03□□□□□ -0.8
LSM5-202ENST00000409292 NEUROD2Q15784 382 aa10.03□□□□□ -0.8
LSM5-202ENST00000409292 PROSER3Q2NL68 480 aa10.03□□□□□ -0.8
LSM5-202ENST00000409292 RIC3Q7Z5B4 369 aa10.03□□□□□ -0.8
LSM5-202ENST00000409292 CASP8AP2Q9UKL3 1982 aa10.03□□□□□ -0.8
LSM5-202ENST00000409292 ANKRD36CQ5JPF3 1778 aa10.02□□□□□ -0.81
LSM5-202ENST00000409292 YDJCA8MPS7 323 aa10.02□□□□□ -0.81
LSM5-202ENST00000409292 IRS4O14654 1257 aaPredicted RBP10.02□□□□□ -0.81
LSM5-202ENST00000409292 TBC1D12O60347 775 aa10.02□□□□□ -0.81
LSM5-202ENST00000409292 TRPA1O75762 1119 aa10.02□□□□□ -0.81
LSM5-202ENST00000409292 NF2P35240 595 aa10.02□□□□□ -0.81
LSM5-202ENST00000409292 GPSM2P81274 684 aa10.02□□□□□ -0.81
LSM5-202ENST00000409292 CALD1Q05682 793 aaKnown RBP10.02□□□□□ -0.81
LSM5-202ENST00000409292 DSG2Q14126 1118 aa10.02□□□□□ -0.81
LSM5-202ENST00000409292 PKN2Q16513 984 aaKnown RBP10.02□□□□□ -0.81
LSM5-202ENST00000409292 CCDC152Q4G0S7 254 aa10.02□□□□□ -0.81
LSM5-202ENST00000409292 LRP10Q7Z4F1 713 aa10.02□□□□□ -0.81
LSM5-202ENST00000409292 CTU1Q7Z7A3 348 aaKnown RBP10.02□□□□□ -0.81
LSM5-202ENST00000409292 AGBL3Q8NEM8 1001 aa10.02□□□□□ -0.81
LSM5-202ENST00000409292 FAM89AQ96GI7 184 aa10.02□□□□□ -0.81
LSM5-202ENST00000409292 GGA3Q9NZ52 723 aa10.02□□□□□ -0.81
LSM5-202ENST00000409292 CHPF2Q9P2E5 772 aa10.02□□□□□ -0.81
LSM5-202ENST00000409292 GGA1Q9UJY5 639 aa10.02□□□□□ -0.81
LSM5-202ENST00000409292 ADM5C9JUS6 153 aa10.01□□□□□ -0.81
LSM5-202ENST00000409292 ATP5J2-PTCD1G3V325 749 aa10.01□□□□□ -0.81
LSM5-202ENST00000409292 UFL1O94874 794 aa10.01□□□□□ -0.81
LSM5-202ENST00000409292 DDX58O95786 925 aaKnown RBP10.01□□□□□ -0.81
LSM5-202ENST00000409292 TRIM28Q13263 835 aaKnown RBP10.01□□□□□ -0.81
LSM5-202ENST00000409292 TTLL12Q14166 644 aaPredicted RBP10.01□□□□□ -0.81
LSM5-202ENST00000409292 OGFOD1Q8N543 542 aa10.01□□□□□ -0.81
LSM5-202ENST00000409292 TBC1D16Q8TBP0 767 aa10.01□□□□□ -0.81
LSM5-202ENST00000409292 CELF1Q92879 486 aaKnown RBP10.01□□□□□ -0.81
LSM5-202ENST00000409292 RNF186Q9NXI6 227 aa10.01□□□□□ -0.81
LSM5-202ENST00000409292 CHL1O00533 1208 aa10□□□□□ -0.81
LSM5-202ENST00000409292 SLC10A3P09131 477 aa10□□□□□ -0.81
LSM5-202ENST00000409292 VIL1P09327 827 aaKnown RBP10□□□□□ -0.81
LSM5-202ENST00000409292 USP17L8P0C7I0 530 aa10□□□□□ -0.81
LSM5-202ENST00000409292 PBX2P40425 430 aa10□□□□□ -0.81
LSM5-202ENST00000409292 RTL5Q5HYW3 569 aaPredicted RBP10□□□□□ -0.81
LSM5-202ENST00000409292 SLC51AQ86UW1 340 aa10□□□□□ -0.81
LSM5-202ENST00000409292 ZBTB38Q8NAP3 1195 aaPredicted RBP10□□□□□ -0.81
LSM5-202ENST00000409292 RUNDC1Q96C34 613 aa10□□□□□ -0.81
LSM5-202ENST00000409292 CDCA5Q96FF9 252 aa10□□□□□ -0.81
LSM5-202ENST00000409292 ISCA1Q9BUE6 129 aa10□□□□□ -0.81
LSM5-202ENST00000409292 CRISPLD2Q9H0B8 497 aa10□□□□□ -0.81
LSM5-202ENST00000409292 POLLQ9UGP5 575 aa10□□□□□ -0.81
LSM5-202ENST00000409292 LHX6Q9UPM6 363 aa10□□□□□ -0.81
LSM5-202ENST00000409292 SHTN1A0MZ66 631 aa9.99□□□□□ -0.81
LSM5-202ENST00000409292 FAM155AB1AL88 458 aaPredicted RBP9.99□□□□□ -0.81
LSM5-202ENST00000409292 ATP2B4P23634 1241 aa9.99□□□□□ -0.81
LSM5-202ENST00000409292 PDE4AP27815 886 aa9.99□□□□□ -0.81
LSM5-202ENST00000409292 MMP14P50281 582 aa9.99□□□□□ -0.81
LSM5-202ENST00000409292 SCARF1Q14162 830 aa9.99□□□□□ -0.81
LSM5-202ENST00000409292 ANGEL2Q5VTE6 544 aaKnown RBP9.99□□□□□ -0.81
LSM5-202ENST00000409292 RSBN1LQ6PCB5 846 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms