RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 MPNDQ8N594 471 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 NCOA7Q8NI08 942 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 NEK1Q96PY6 1258 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 METP08581 1390 aa4.4□□□□□ -1.7
RGPD4-201ENST00000408999 SYCP1Q15431 976 aa4.4□□□□□ -1.71
RGPD4-201ENST00000408999 SPRED3Q2MJR0 410 aa4.4□□□□□ -1.71
RGPD4-201ENST00000408999 PPP4R3BQ5MIZ7 849 aa4.4□□□□□ -1.71
RGPD4-201ENST00000408999 CNKSR2Q8WXI2 1034 aa4.4□□□□□ -1.71
RGPD4-201ENST00000408999 TNPO1Q92973 898 aaKnown RBP4.4□□□□□ -1.71
RGPD4-201ENST00000408999 ESYT1Q9BSJ8 1104 aa4.4□□□□□ -1.71
RGPD4-201ENST00000408999 CRNKL1Q9BZJ0 848 aaKnown RBP4.4□□□□□ -1.71
RGPD4-201ENST00000408999 TRIM35Q9UPQ4 493 aa4.4□□□□□ -1.71
RGPD4-201ENST00000408999 SLC4A4Q9Y6R1 1079 aa4.4□□□□□ -1.71
RGPD4-201ENST00000408999 SOS1Q07889 1333 aaPredicted RBP4.4□□□□□ -1.71
RGPD4-201ENST00000408999 NPHP4O75161 1426 aaPredicted RBP4.4□□□□□ -1.71
RGPD4-201ENST00000408999 ATP7BP35670 1465 aa4.4□□□□□ -1.71
RGPD4-201ENST00000408999 MYO5AQ9Y4I1 1855 aaKnown RBP4.4□□□□□ -1.71
RGPD4-201ENST00000408999 DICER1Q9UPY3 1922 aaKnown RBP4.4□□□□□ -1.71
RGPD4-201ENST00000408999 ESPNB1AK53 854 aa4.4□□□□□ -1.71
RGPD4-201ENST00000408999 IRS4O14654 1257 aaPredicted RBP4.4□□□□□ -1.71
RGPD4-201ENST00000408999 IL15P40933 162 aaPredicted RBP4.4□□□□□ -1.71
RGPD4-201ENST00000408999 METAP2P50579 478 aaKnown RBP eCLIP4.4□□□□□ -1.71
RGPD4-201ENST00000408999 PDE4BQ07343 736 aa4.4□□□□□ -1.71
RGPD4-201ENST00000408999 HSP90AA2PQ14568 343 aaPredicted RBP4.4□□□□□ -1.71
RGPD4-201ENST00000408999 CCDC183Q5T5S1 534 aa4.4□□□□□ -1.71
RGPD4-201ENST00000408999 CCDC82Q8N4S0 544 aa4.4□□□□□ -1.71
RGPD4-201ENST00000408999 KAT14Q9H8E8 782 aa4.4□□□□□ -1.71
RGPD4-201ENST00000408999 SLC52A2Q9HAB3 445 aa4.4□□□□□ -1.71
RGPD4-201ENST00000408999 RGS12O14924 1447 aa4.4□□□□□ -1.71
RGPD4-201ENST00000408999 RRP9O43818 475 aaKnown RBP4.39□□□□□ -1.71
RGPD4-201ENST00000408999 BAG3O95817 575 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 MATR3P43243 847 aaKnown RBP eCLIP4.39□□□□□ -1.71
RGPD4-201ENST00000408999 NLRP5P59047 1200 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 G2E3Q7L622 706 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 ZNF804AQ7Z570 1209 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 ARGLU1Q9NWB6 273 aaPredicted RBP4.39□□□□□ -1.71
RGPD4-201ENST00000408999 PAG1Q9NWQ8 432 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 MAP3K4Q9Y6R4 1608 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 TTC41PQ6P2S7 1318 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 SMTNL1A8MU46 457 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 CYP7A1P22680 504 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 HMGN5P82970 282 aaKnown RBP4.39□□□□□ -1.71
RGPD4-201ENST00000408999 MCMDC2Q4G0Z9 681 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 ZFYVE27Q5T4F4 411 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 CUL5Q93034 780 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 RUFY1Q96T51 708 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 ZNHIT6Q9NWK9 470 aaKnown RBP4.39□□□□□ -1.71
RGPD4-201ENST00000408999 IQSEC3Q9UPP2 1182 aaPredicted RBP4.39□□□□□ -1.71
RGPD4-201ENST00000408999 CDC42BPBQ9Y5S2 1711 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 LGR6Q9HBX8 967 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 BMP2KQ9NSY1 1161 aaPredicted RBP4.39□□□□□ -1.71
RGPD4-201ENST00000408999 ZBTB40Q9NUA8 1239 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 RTCBQ9Y3I0 505 aaKnown RBP4.39□□□□□ -1.71
RGPD4-201ENST00000408999 LAMA4Q16363 1823 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 PTPRUQ92729 1446 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 TSPY2A6NKD2 308 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 LDHCP07864 332 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 TNIP1Q15025 636 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 ZNF790Q6PG37 636 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 LINS1Q8NG48 757 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 PLEKHF1Q96S99 279 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 CDC42BPGQ6DT37 1551 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 MAGEB6P1A0A0J9YX57 407 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 F8W031 263 aaPredicted RBP4.39□□□□□ -1.71
RGPD4-201ENST00000408999 GNPATO15228 680 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 RNF113AO15541 343 aaKnown RBP4.39□□□□□ -1.71
RGPD4-201ENST00000408999 STX6O43752 255 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 PPFIA3O75145 1194 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 HLA-DOAP06340 250 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 MICU3Q86XE3 530 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 ZGPATQ8N5A5 531 aaKnown RBP4.39□□□□□ -1.71
RGPD4-201ENST00000408999 SLC26A6Q9BXS9 759 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 KRT23Q9C075 422 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 DEF6Q9H4E7 631 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 BABAM1Q9NWV8 329 aa4.39□□□□□ -1.71
RGPD4-201ENST00000408999 RBM8AQ9Y5S9 174 aaKnown RBP4.39□□□□□ -1.71
RGPD4-201ENST00000408999 CD163L1Q9NR16 1453 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 LAMC1P11047 1609 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 CAMSAP1Q5T5Y3 1602 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 ZFYP08048 801 aaPredicted RBP4.38□□□□□ -1.71
RGPD4-201ENST00000408999 TSPY3P0CV98 308 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 TSPY8P0CW00 308 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 PICALMQ13492 652 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 TTLL12Q14166 644 aaPredicted RBP4.38□□□□□ -1.71
RGPD4-201ENST00000408999 DHX8Q14562 1220 aaKnown RBP4.38□□□□□ -1.71
RGPD4-201ENST00000408999 CLEC17AQ6ZS10 378 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 PLBD2Q8NHP8 589 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 NLRP3Q96P20 1036 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 CDCA7Q9BWT1 371 aaPredicted RBP4.38□□□□□ -1.71
RGPD4-201ENST00000408999 SCAND2PQ9GZW5 306 aaPredicted RBP4.38□□□□□ -1.71
RGPD4-201ENST00000408999 DCTPP1Q9H773 170 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 EHMT1Q9H9B1 1298 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 PARP3Q9Y6F1 533 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 MYH7P12883 1935 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 GLI2P10070 1586 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 CCDC194A0A1B0GVG4 234 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 TRIM66O15016 1216 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 KIF5BP33176 963 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 MCM5P33992 734 aa4.38□□□□□ -1.71
RGPD4-201ENST00000408999 KCTD19Q17RG1 926 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms