RNA–Protein interactions for RNA: ENST00000408749.1

RNU6ATAC-201, Transcript of RNA, U6atac small nuclear (U12-dependent splicing), humanhuman

BASIC

Gene RNU6ATAC, Length 126 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC-201ENST00000408749 PPP2R3BQ9Y5P8 575 aa5.1□□□□□ -1.59
RNU6ATAC-201ENST00000408749 COL3A1P02461 1466 aaPredicted RBP5.09□□□□□ -1.59
RNU6ATAC-201ENST00000408749 WTIPA6NIX2 430 aaPredicted RBP5.09□□□□□ -1.59
RNU6ATAC-201ENST00000408749 SOX1O00570 391 aaPredicted RBP5.09□□□□□ -1.59
RNU6ATAC-201ENST00000408749 COL9A1P20849 921 aa5.09□□□□□ -1.59
RNU6ATAC-201ENST00000408749 PRKAR2BP31323 418 aa5.09□□□□□ -1.59
RNU6ATAC-201ENST00000408749 BMP8BP34820 402 aa5.09□□□□□ -1.59
RNU6ATAC-201ENST00000408749 GJA8P48165 433 aa5.09□□□□□ -1.59
RNU6ATAC-201ENST00000408749 MAP3K11Q16584 847 aa5.09□□□□□ -1.59
RNU6ATAC-201ENST00000408749 NBPF9Q3BBW0 867 aa5.09□□□□□ -1.59
RNU6ATAC-201ENST00000408749 MCM10Q7L590 875 aa5.09□□□□□ -1.59
RNU6ATAC-201ENST00000408749 PODNQ7Z5L7 613 aa5.09□□□□□ -1.59
RNU6ATAC-201ENST00000408749 ANKRD13AQ8IZ07 590 aa5.09□□□□□ -1.59
RNU6ATAC-201ENST00000408749 HELBQ8NG08 1087 aaPredicted RBP5.09□□□□□ -1.59
RNU6ATAC-201ENST00000408749 RAET1EQ8TD07 263 aa5.09□□□□□ -1.59
RNU6ATAC-201ENST00000408749 FAM122AQ96E09 287 aa5.09□□□□□ -1.59
RNU6ATAC-201ENST00000408749 TRIM47Q96LD4 638 aa5.09□□□□□ -1.59
RNU6ATAC-201ENST00000408749 POLLQ9UGP5 575 aa5.09□□□□□ -1.59
RNU6ATAC-201ENST00000408749 COL6A3P12111 3177 aa5.09□□□□□ -1.59
RNU6ATAC-201ENST00000408749 CENPFP49454 3210 aa5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 KIAA0100Q14667 2235 aaKnown RBP5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 XDHP47989 1333 aa5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 WNT10BO00744 389 aa5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 SASH1O94885 1247 aa5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 GJB1P08034 283 aa5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 PLA2G5P39877 138 aa5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 GTF2A2P52657 109 aa5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 LRIT3Q3SXY7 679 aa5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 NLRP10Q86W26 655 aa5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 TDHQ8IZJ6 230 aa5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 CELF1Q92879 486 aaKnown RBP5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 SHISA4Q96DD7 197 aa5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 RNF208Q9H0X6 261 aa5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 ZCCHC17Q9NP64 241 aaKnown RBP5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 KCNQ5Q9NR82 932 aa5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 MTMR10Q9NXD2 777 aa5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 PODXL2Q9NZ53 605 aa5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 SCAF8Q9UPN6 1271 aaKnown RBP5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 SZT2Q5T011 3432 aa5.08□□□□□ -1.6
RNU6ATAC-201ENST00000408749 FAM205AQ6ZU69 1335 aa5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 IRS2Q9Y4H2 1338 aa5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 CCL15-CCL14A0A0B4J2E2 113 aa5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 TESPA1A2RU30 521 aaPredicted RBP5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 CCL5P13501 91 aa5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 ATP2B4P23634 1241 aa5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 GRK4P32298 578 aa5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 RPS8P62241 208 aaKnown RBP5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 LACTBP83111 547 aaPredicted RBP5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 SF3B3Q15393 1217 aaKnown RBP5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 CCL15Q16663 113 aa5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 Q7L0L9 218 aa5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 SLAIN1Q8ND83 568 aa5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 OPTNQ96CV9 577 aa5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 GMLQ99445 158 aa5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 RSPH6AQ9H0K4 717 aa5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 DEFB129Q9H1M3 183 aa5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 STAP2Q9UGK3 403 aa5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 RIPOR2Q9Y4F9 1068 aa5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 CSADQ9Y600 493 aa5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 OTOFQ9HC10 1997 aa5.07□□□□□ -1.6
RNU6ATAC-201ENST00000408749 CUL9Q8IWT3 2517 aa5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 MED23Q9ULK4 1368 aa5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 COL4A1P02462 1669 aa5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 ZNF804BA4D1E1 1349 aa5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 MYPNQ86TC9 1320 aa5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 TLR2O60603 784 aa5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 FMNL1O95466 1100 aaPredicted RBP5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 EIF4A1P60842 406 aaKnown RBP5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 TNFAIP1Q13829 316 aa5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 MTFR1Q15390 333 aa5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 DLGAP5Q15398 846 aa5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 CCDC152Q4G0S7 254 aa5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 AMER1Q5JTC6 1135 aaPredicted RBP5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 ZNF697Q5TEC3 545 aa5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 STRIP1Q5VSL9 837 aa5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 NECAB2Q7Z6G3 386 aa5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 UBE2Q1Q7Z7E8 422 aa5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 U2AF1L4Q8WU68 220 aaKnown RBP5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 CLMNQ96JQ2 1002 aa5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 UBE2OQ9C0C9 1292 aaKnown RBP5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 ELP3Q9H9T3 547 aa5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 SRRDQ9UH36 339 aa5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 A0A0C4DFX4 3053 aa5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 BRCA2P51587 3418 aa5.06□□□□□ -1.6
RNU6ATAC-201ENST00000408749 SSC5DA1L4H1 1573 aa5.05□□□□□ -1.6
RNU6ATAC-201ENST00000408749 ZSWIM8A7E2V4 1837 aa5.05□□□□□ -1.6
RNU6ATAC-201ENST00000408749 IRS4O14654 1257 aaPredicted RBP5.05□□□□□ -1.6
RNU6ATAC-201ENST00000408749 SGPL1O95470 568 aa5.05□□□□□ -1.6
RNU6ATAC-201ENST00000408749 TFRCP02786 760 aaKnown RBP5.05□□□□□ -1.6
RNU6ATAC-201ENST00000408749 U2AF1L5P0DN76 240 aaPredicted RBP5.05□□□□□ -1.6
RNU6ATAC-201ENST00000408749 CETPP11597 493 aa5.05□□□□□ -1.6
RNU6ATAC-201ENST00000408749 EIF2S2P20042 333 aaKnown RBP5.05□□□□□ -1.6
RNU6ATAC-201ENST00000408749 BCAMP50895 628 aa5.05□□□□□ -1.6
RNU6ATAC-201ENST00000408749 U2AF1Q01081 240 aaKnown RBP eCLIP5.05□□□□□ -1.6
RNU6ATAC-201ENST00000408749 AIMP1Q12904 312 aaKnown RBP5.05□□□□□ -1.6
RNU6ATAC-201ENST00000408749 DCTN1Q14203 1278 aa5.05□□□□□ -1.6
RNU6ATAC-201ENST00000408749 DACT2Q5SW24 774 aa5.05□□□□□ -1.6
RNU6ATAC-201ENST00000408749 CC2D1BQ5T0F9 858 aaKnown RBP5.05□□□□□ -1.6
RNU6ATAC-201ENST00000408749 FAM109BQ6ICB4 259 aaPredicted RBP5.05□□□□□ -1.6
RNU6ATAC-201ENST00000408749 KIAA0825Q8IV33 1275 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms