RNA–Protein interactions for RNA: ENST00000406768.1

PSEN1-205, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 4,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-205ENST00000406768 CPLX2Q6PUV4 134 aaKnown RBP10.35□□□□□ -0.75
PSEN1-205ENST00000406768 SMARCC2Q8TAQ2 1214 aa10.35□□□□□ -0.75
PSEN1-205ENST00000406768 MRPS27Q92552 414 aaKnown RBP10.35□□□□□ -0.75
PSEN1-205ENST00000406768 THUMPD2Q9BTF0 503 aaKnown RBP10.35□□□□□ -0.75
PSEN1-205ENST00000406768 STK26Q9P289 416 aa10.35□□□□□ -0.75
PSEN1-205ENST00000406768 SAMM50Q9Y512 469 aa10.35□□□□□ -0.75
PSEN1-205ENST00000406768 FANCCQ00597 558 aa10.35□□□□□ -0.75
PSEN1-205ENST00000406768 SRGAP1Q7Z6B7 1085 aa10.35□□□□□ -0.75
PSEN1-205ENST00000406768 DTNBO60941 627 aa10.35□□□□□ -0.75
PSEN1-205ENST00000406768 TRIM29Q14134 588 aa10.35□□□□□ -0.75
PSEN1-205ENST00000406768 ZRSR2Q15696 482 aaKnown RBP10.35□□□□□ -0.75
PSEN1-205ENST00000406768 FSD1Q9BTV5 496 aa10.35□□□□□ -0.75
PSEN1-205ENST00000406768 PPP2R2CQ9Y2T4 447 aa10.35□□□□□ -0.75
PSEN1-205ENST00000406768 RGS12O14924 1447 aa10.35□□□□□ -0.75
PSEN1-205ENST00000406768 PRAG1Q86YV5 1406 aa10.34□□□□□ -0.75
PSEN1-205ENST00000406768 TBC1D8O95759 1140 aa10.34□□□□□ -0.75
PSEN1-205ENST00000406768 PSMD2Q13200 908 aa10.34□□□□□ -0.75
PSEN1-205ENST00000406768 CFAP70Q5T0N1 1121 aa10.34□□□□□ -0.75
PSEN1-205ENST00000406768 L2HGDHQ9H9P8 463 aa10.34□□□□□ -0.75
PSEN1-205ENST00000406768 RIPOR2Q9Y4F9 1068 aa10.34□□□□□ -0.75
PSEN1-205ENST00000406768 SARM1Q6SZW1 724 aa10.34□□□□□ -0.75
PSEN1-205ENST00000406768 MRPL50Q8N5N7 158 aaKnown RBP10.34□□□□□ -0.75
PSEN1-205ENST00000406768 ZNHIT6Q9NWK9 470 aaKnown RBP10.34□□□□□ -0.75
PSEN1-205ENST00000406768 ARHGEF12Q9NZN5 1544 aa10.34□□□□□ -0.75
PSEN1-205ENST00000406768 DUOX2Q9NRD8 1548 aa10.34□□□□□ -0.75
PSEN1-205ENST00000406768 RWDD2BP57060 319 aa10.34□□□□□ -0.75
PSEN1-205ENST00000406768 SPDL1Q96EA4 605 aa10.34□□□□□ -0.75
PSEN1-205ENST00000406768 GDAP1L1Q96MZ0 367 aa10.34□□□□□ -0.75
PSEN1-205ENST00000406768 BCORL1Q5H9F3 1711 aa10.34□□□□□ -0.75
PSEN1-205ENST00000406768 NEFHP12036 1026 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 FAM160A1Q05DH4 1040 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 GRIPAP1Q4V328 841 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 HSP90AA4PQ58FG1 418 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 ARFGAP2Q8N6H7 521 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 ABCB6Q9NP58 842 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.33□□□□□ -0.76
PSEN1-205ENST00000406768 SYCP2Q9BX26 1530 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 KANK1Q14678 1352 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 VPS53Q5VIR6 699 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 FCHSD2O94868 740 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 CPA1P15085 419 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 PSME1Q06323 249 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 ACTN3Q08043 901 aaPredicted RBP10.33□□□□□ -0.76
PSEN1-205ENST00000406768 KRT32Q14532 448 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 FAM43BQ6ZT52 329 aaPredicted RBP10.33□□□□□ -0.76
PSEN1-205ENST00000406768 MAATS1Q7Z4T9 603 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.33□□□□□ -0.76
PSEN1-205ENST00000406768 IQUBQ8NA54 791 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 TBC1D31Q96DN5 1066 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 NAPGQ99747 312 aaPredicted RBP10.33□□□□□ -0.76
PSEN1-205ENST00000406768 AP5Z1O43299 807 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 GUCY1B3Q02153 619 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 CRYMQ14894 314 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 NBPF9Q3BBW0 867 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 CDC37L1Q7L3B6 337 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 BRF1Q92994 677 aa10.33□□□□□ -0.76
PSEN1-205ENST00000406768 CEP85Q6P2H3 762 aa10.32□□□□□ -0.76
PSEN1-205ENST00000406768 PNMA8AQ86V59 439 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-205ENST00000406768 ZNF513Q8N8E2 541 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-205ENST00000406768 FANCAO15360 1455 aa10.32□□□□□ -0.76
PSEN1-205ENST00000406768 RTL1A6NKG5 1358 aa10.32□□□□□ -0.76
PSEN1-205ENST00000406768 PAFAH1B1P43034 410 aa10.32□□□□□ -0.76
PSEN1-205ENST00000406768 SCRN1Q12765 414 aa10.32□□□□□ -0.76
PSEN1-205ENST00000406768 DBN1Q16643 649 aa10.32□□□□□ -0.76
PSEN1-205ENST00000406768 PPIP5K1Q6PFW1 1433 aa10.32□□□□□ -0.76
PSEN1-205ENST00000406768 SEMA3FQ13275 785 aa10.32□□□□□ -0.76
PSEN1-205ENST00000406768 CCDC40Q4G0X9 1142 aa10.32□□□□□ -0.76
PSEN1-205ENST00000406768 C11orf57Q6ZUT1 292 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-205ENST00000406768 FCHSD1Q86WN1 690 aa10.32□□□□□ -0.76
PSEN1-205ENST00000406768 PRPF38AQ8NAV1 312 aaKnown RBP10.32□□□□□ -0.76
PSEN1-205ENST00000406768 DHX58Q96C10 678 aa10.32□□□□□ -0.76
PSEN1-205ENST00000406768 JADE2Q9NQC1 790 aa10.32□□□□□ -0.76
PSEN1-205ENST00000406768 CDC23Q9UJX2 597 aa10.32□□□□□ -0.76
PSEN1-205ENST00000406768 MAP3K4Q9Y6R4 1608 aa10.31□□□□□ -0.76
PSEN1-205ENST00000406768 ANKRD18BA2A2Z9 1011 aa10.31□□□□□ -0.76
PSEN1-205ENST00000406768 MATR3P43243 847 aaKnown RBP eCLIP10.31□□□□□ -0.76
PSEN1-205ENST00000406768 MYL5Q02045 173 aa10.31□□□□□ -0.76
PSEN1-205ENST00000406768 IMMTQ16891 758 aaKnown RBP10.31□□□□□ -0.76
PSEN1-205ENST00000406768 CPLX4Q7Z7G2 160 aa10.31□□□□□ -0.76
PSEN1-205ENST00000406768 NECTIN2Q92692 538 aa10.31□□□□□ -0.76
PSEN1-205ENST00000406768 EIF2AK4Q9P2K8 1649 aaKnown RBP10.31□□□□□ -0.76
PSEN1-205ENST00000406768 GLRX3O76003 335 aaKnown RBP10.31□□□□□ -0.76
PSEN1-205ENST00000406768 PIP4K2AP48426 406 aaPredicted RBP10.31□□□□□ -0.76
PSEN1-205ENST00000406768 CCZ1BP86790 482 aa10.31□□□□□ -0.76
PSEN1-205ENST00000406768 CCZ1P86791 482 aaPredicted RBP10.31□□□□□ -0.76
PSEN1-205ENST00000406768 TRAF1Q13077 416 aa10.31□□□□□ -0.76
PSEN1-205ENST00000406768 NFE2L2Q16236 605 aa10.31□□□□□ -0.76
PSEN1-205ENST00000406768 SPECC1LQ69YQ0 1117 aa10.31□□□□□ -0.76
PSEN1-205ENST00000406768 LARP1Q6PKG0 1096 aaKnown RBP10.31□□□□□ -0.76
PSEN1-205ENST00000406768 RASSF8Q8NHQ8 419 aa10.31□□□□□ -0.76
PSEN1-205ENST00000406768 TCEANC2Q96MN5 208 aa10.31□□□□□ -0.76
PSEN1-205ENST00000406768 MEIS3Q99687 375 aa10.31□□□□□ -0.76
PSEN1-205ENST00000406768 ANKS4BQ8N8V4 417 aa10.31□□□□□ -0.76
PSEN1-205ENST00000406768 MIEF2Q96C03 454 aa10.31□□□□□ -0.76
PSEN1-205ENST00000406768 CAPZA3Q96KX2 299 aa10.31□□□□□ -0.76
PSEN1-205ENST00000406768 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.31□□□□□ -0.76
PSEN1-205ENST00000406768 SNX14Q9Y5W7 946 aa10.31□□□□□ -0.76
PSEN1-205ENST00000406768 SMIM24O75264 130 aa10.3□□□□□ -0.76
PSEN1-205ENST00000406768 ZRANB2O95218 330 aaKnown RBP eCLIP10.3□□□□□ -0.76
PSEN1-205ENST00000406768 PAX7P23759 505 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms