RNA–Protein interactions for RNA: ENST00000405957.6

LSP1-203, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LSP1, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-203ENST00000405957 CREB3L3Q68CJ9 461 aa20.57■□□□□ 0.88
LSP1-203ENST00000405957 MCTP1Q6DN14 999 aa20.57■□□□□ 0.88
LSP1-203ENST00000405957 CCDC125Q86Z20 511 aa20.57■□□□□ 0.88
LSP1-203ENST00000405957 JAKMIP1Q96N16 626 aaKnown RBP20.57■□□□□ 0.88
LSP1-203ENST00000405957 DDX49Q9Y6V7 483 aaKnown RBP20.57■□□□□ 0.88
LSP1-203ENST00000405957 MROH5Q6ZUA9 1318 aa20.56■□□□□ 0.88
LSP1-203ENST00000405957 WDR33Q9C0J8 1336 aaKnown RBP20.56■□□□□ 0.88
LSP1-203ENST00000405957 AKAP11Q9UKA4 1901 aa20.56■□□□□ 0.88
LSP1-203ENST00000405957 A0A1B0GUL6 1792 aa20.56■□□□□ 0.88
LSP1-203ENST00000405957 PKP1Q13835 747 aa20.56■□□□□ 0.88
LSP1-203ENST00000405957 ANKRD1Q15327 319 aa20.56■□□□□ 0.88
LSP1-203ENST00000405957 CCDC152Q4G0S7 254 aa20.56■□□□□ 0.88
LSP1-203ENST00000405957 RUFY3Q7L099 469 aa20.56■□□□□ 0.88
LSP1-203ENST00000405957 ZNF589Q86UQ0 364 aaPredicted RBP20.56■□□□□ 0.88
LSP1-203ENST00000405957 PDRG1Q9NUG6 133 aa20.56■□□□□ 0.88
LSP1-203ENST00000405957 ZDHHC9Q9Y397 364 aa20.56■□□□□ 0.88
LSP1-203ENST00000405957 FAM177BA6PVY3 158 aa20.55■□□□□ 0.88
LSP1-203ENST00000405957 HMGB2P26583 209 aaKnown RBP20.55■□□□□ 0.88
LSP1-203ENST00000405957 LRRFIP1Q32MZ4 808 aaKnown RBP20.55■□□□□ 0.88
LSP1-203ENST00000405957 ALDH8A1Q9H2A2 487 aaPredicted RBP20.55■□□□□ 0.88
LSP1-203ENST00000405957 TAF5LO75529 589 aa20.54■□□□□ 0.88
LSP1-203ENST00000405957 PHF14O94880 888 aa20.54■□□□□ 0.88
LSP1-203ENST00000405957 PDE8BO95263 885 aa20.54■□□□□ 0.88
LSP1-203ENST00000405957 MCMDC2Q4G0Z9 681 aa20.54■□□□□ 0.88
LSP1-203ENST00000405957 ZNF827Q17R98 1081 aa20.54■□□□□ 0.88
LSP1-203ENST00000405957 USPL1Q5W0Q7 1092 aa20.54■□□□□ 0.88
LSP1-203ENST00000405957 NOL8Q76FK4 1167 aaKnown RBP20.54■□□□□ 0.88
LSP1-203ENST00000405957 ZNF512BQ96KM6 892 aaPredicted RBP20.54■□□□□ 0.88
LSP1-203ENST00000405957 HELLSQ9NRZ9 838 aa20.54■□□□□ 0.88
LSP1-203ENST00000405957 NARFQ9UHQ1 456 aa20.54■□□□□ 0.88
LSP1-203ENST00000405957 SLC27A2O14975 620 aa20.53■□□□□ 0.88
LSP1-203ENST00000405957 AKT1S1Q96B36 256 aa20.53■□□□□ 0.88
LSP1-203ENST00000405957 LMBRD1Q9NUN5 540 aa20.53■□□□□ 0.88
LSP1-203ENST00000405957 U3KPZ7 1027 aaPredicted RBP20.53■□□□□ 0.88
LSP1-203ENST00000405957 PUM3Q15397 648 aaKnown RBP20.52■□□□□ 0.88
LSP1-203ENST00000405957 ARHGEF1Q92888 912 aaKnown RBP20.52■□□□□ 0.88
LSP1-203ENST00000405957 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.51■□□□□ 0.87
LSP1-203ENST00000405957 MBD3O95983 291 aa20.51■□□□□ 0.87
LSP1-203ENST00000405957 ZMYM1Q5SVZ6 1142 aa20.51■□□□□ 0.87
LSP1-203ENST00000405957 TRAPPC3LQ5T215 181 aa20.51■□□□□ 0.87
LSP1-203ENST00000405957 BCL2L12Q9HB09 334 aa20.51■□□□□ 0.87
LSP1-203ENST00000405957 BLOC1S2Q6QNY1 142 aa20.51■□□□□ 0.87
LSP1-203ENST00000405957 UPF1Q92900 1129 aaKnown RBP eCLIP20.51■□□□□ 0.87
LSP1-203ENST00000405957 RNF113AO15541 343 aaKnown RBP20.5■□□□□ 0.87
LSP1-203ENST00000405957 FGFR2P21802 821 aa20.5■□□□□ 0.87
LSP1-203ENST00000405957 ADCK5Q3MIX3 580 aa20.5■□□□□ 0.87
LSP1-203ENST00000405957 LPIN2Q92539 896 aa20.5■□□□□ 0.87
LSP1-203ENST00000405957 MPHOSPH8Q99549 860 aa20.5■□□□□ 0.87
LSP1-203ENST00000405957 TFCP2L1Q9NZI6 479 aa20.5■□□□□ 0.87
LSP1-203ENST00000405957 SMC3Q9UQE7 1217 aa20.5■□□□□ 0.87
LSP1-203ENST00000405957 ATP6V1DQ9Y5K8 247 aa20.5■□□□□ 0.87
LSP1-203ENST00000405957 ZFYP08048 801 aaPredicted RBP20.49■□□□□ 0.87
LSP1-203ENST00000405957 ADRA2BP18089 450 aa20.49■□□□□ 0.87
LSP1-203ENST00000405957 IGHMBP2P38935 993 aaKnown RBP20.49■□□□□ 0.87
LSP1-203ENST00000405957 ANO8Q9HCE9 1232 aaPredicted RBP20.49■□□□□ 0.87
LSP1-203ENST00000405957 SEC31BQ9NQW1 1179 aa20.49■□□□□ 0.87
LSP1-203ENST00000405957 SRP68Q9UHB9 627 aaKnown RBP20.49■□□□□ 0.87
LSP1-203ENST00000405957 DOCK2Q92608 1830 aa20.49■□□□□ 0.87
LSP1-203ENST00000405957 RFC4P35249 363 aa20.49■□□□□ 0.87
LSP1-203ENST00000405957 FKBP4Q02790 459 aaKnown RBP eCLIP20.49■□□□□ 0.87
LSP1-203ENST00000405957 SCARF1Q14162 830 aa20.49■□□□□ 0.87
LSP1-203ENST00000405957 TBC1D9BQ66K14 1250 aa20.49■□□□□ 0.87
LSP1-203ENST00000405957 SEC62Q99442 399 aaKnown RBP20.49■□□□□ 0.87
LSP1-203ENST00000405957 NYXQ9GZU5 481 aa20.49■□□□□ 0.87
LSP1-203ENST00000405957 COL4A1P02462 1669 aa20.48■□□□□ 0.87
LSP1-203ENST00000405957 ZPR1O75312 459 aa20.48■□□□□ 0.87
LSP1-203ENST00000405957 CHGBP05060 677 aa20.48■□□□□ 0.87
LSP1-203ENST00000405957 SF3B3Q15393 1217 aaKnown RBP20.48■□□□□ 0.87
LSP1-203ENST00000405957 ERFEQ4G0M1 354 aa20.48■□□□□ 0.87
LSP1-203ENST00000405957 CCDC129Q6ZRS4 1044 aa20.48■□□□□ 0.87
LSP1-203ENST00000405957 ILDR2Q71H61 639 aa20.48■□□□□ 0.87
LSP1-203ENST00000405957 CDC5LQ99459 802 aaKnown RBP20.48■□□□□ 0.87
LSP1-203ENST00000405957 MAST3O60307 1309 aa20.47■□□□□ 0.87
LSP1-203ENST00000405957 UQCRFS1P1P0C7P4 283 aa20.47■□□□□ 0.87
LSP1-203ENST00000405957 SLC5A1P13866 664 aa20.47■□□□□ 0.87
LSP1-203ENST00000405957 RPS6KB1P23443 525 aa20.47■□□□□ 0.87
LSP1-203ENST00000405957 ARID4AP29374 1257 aaPredicted RBP20.47■□□□□ 0.87
LSP1-203ENST00000405957 SLC10A5Q5PT55 438 aa20.47■□□□□ 0.87
LSP1-203ENST00000405957 DSCC1Q9BVC3 393 aa20.47■□□□□ 0.87
LSP1-203ENST00000405957 GRPEL1Q9HAV7 217 aa20.47■□□□□ 0.87
LSP1-203ENST00000405957 HMGB1P09429 215 aaKnown RBP20.46■□□□□ 0.87
LSP1-203ENST00000405957 MCAMP43121 646 aa20.46■□□□□ 0.87
LSP1-203ENST00000405957 ZAP70P43403 619 aa20.46■□□□□ 0.87
LSP1-203ENST00000405957 PRPF40AO75400 957 aaKnown RBP20.46■□□□□ 0.87
LSP1-203ENST00000405957 XRCC6P12956 609 aaKnown RBP eCLIP20.46■□□□□ 0.87
LSP1-203ENST00000405957 ZNF445P59923 1031 aa20.46■□□□□ 0.87
LSP1-203ENST00000405957 BRPF3Q9ULD4 1205 aa20.46■□□□□ 0.87
LSP1-203ENST00000405957 LAMA4Q16363 1823 aa20.45■□□□□ 0.87
LSP1-203ENST00000405957 MYO5AQ9Y4I1 1855 aaKnown RBP20.45■□□□□ 0.86
LSP1-203ENST00000405957 TTF1Q15361 905 aaPredicted RBP20.45■□□□□ 0.86
LSP1-203ENST00000405957 SLC15A2Q16348 729 aa20.45■□□□□ 0.86
LSP1-203ENST00000405957 CCDC102BQ68D86 513 aa20.45■□□□□ 0.86
LSP1-203ENST00000405957 SETDB2Q96T68 719 aa20.45■□□□□ 0.86
LSP1-203ENST00000405957 STK32BQ9NY57 414 aa20.45■□□□□ 0.86
LSP1-203ENST00000405957 STX6O43752 255 aa20.44■□□□□ 0.86
LSP1-203ENST00000405957 BICDL1Q6ZP65 573 aa20.44■□□□□ 0.86
LSP1-203ENST00000405957 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.44■□□□□ 0.86
LSP1-203ENST00000405957 TAF1P21675 1872 aa20.44■□□□□ 0.86
LSP1-203ENST00000405957 ZSCAN22P10073 491 aaPredicted RBP20.44■□□□□ 0.86
LSP1-203ENST00000405957 CPA1P15085 419 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms