RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 LY75O60449 1722 aa16.85■□□□□ 0.29
PRAME-205ENST00000405655 MYH7P12883 1935 aa16.85■□□□□ 0.29
PRAME-205ENST00000405655 ZNF831Q5JPB2 1677 aa16.85■□□□□ 0.29
PRAME-205ENST00000405655 BAG4O95429 457 aaKnown RBP16.85■□□□□ 0.29
PRAME-205ENST00000405655 FGFR2P21802 821 aa16.85■□□□□ 0.29
PRAME-205ENST00000405655 GTF2E1P29083 439 aaPredicted RBP16.85■□□□□ 0.29
PRAME-205ENST00000405655 ME3Q16798 604 aa16.85■□□□□ 0.29
PRAME-205ENST00000405655 CCDC152Q4G0S7 254 aa16.85■□□□□ 0.29
PRAME-205ENST00000405655 CHST3Q7LGC8 479 aa16.85■□□□□ 0.29
PRAME-205ENST00000405655 ZNF652Q9Y2D9 606 aa16.85■□□□□ 0.29
PRAME-205ENST00000405655 TCHHQ07283 1943 aa16.85■□□□□ 0.29
PRAME-205ENST00000405655 EPB41L2O43491 1005 aaKnown RBP16.85■□□□□ 0.29
PRAME-205ENST00000405655 TRAK2O60296 914 aa16.85■□□□□ 0.29
PRAME-205ENST00000405655 ONECUT3O60422 494 aaPredicted RBP16.85■□□□□ 0.29
PRAME-205ENST00000405655 HSPD1P10809 573 aaKnown RBP16.85■□□□□ 0.29
PRAME-205ENST00000405655 PRKCSHP14314 528 aaPredicted RBP16.85■□□□□ 0.29
PRAME-205ENST00000405655 ZKSCAN1P17029 563 aaPredicted RBP16.85■□□□□ 0.29
PRAME-205ENST00000405655 HAND2P61296 217 aa16.85■□□□□ 0.29
PRAME-205ENST00000405655 CHRNDQ07001 517 aa16.85■□□□□ 0.29
PRAME-205ENST00000405655 STK3Q13188 491 aa16.85■□□□□ 0.29
PRAME-205ENST00000405655 NARFQ9UHQ1 456 aa16.85■□□□□ 0.29
PRAME-205ENST00000405655 FBXO3Q9UK99 471 aa16.85■□□□□ 0.29
PRAME-205ENST00000405655 WWC3Q9ULE0 1092 aa16.85■□□□□ 0.29
PRAME-205ENST00000405655 RTCBQ9Y3I0 505 aaKnown RBP16.85■□□□□ 0.29
PRAME-205ENST00000405655 RPAP1Q9BWH6 1393 aaPredicted RBP16.85■□□□□ 0.29
PRAME-205ENST00000405655 MCTP1Q6DN14 999 aa16.84■□□□□ 0.29
PRAME-205ENST00000405655 NKX2-3Q8TAU0 364 aa16.84■□□□□ 0.29
PRAME-205ENST00000405655 ZPR1O75312 459 aa16.84■□□□□ 0.29
PRAME-205ENST00000405655 IDH1O75874 414 aaKnown RBP16.84■□□□□ 0.29
PRAME-205ENST00000405655 KLRK1P26718 216 aa16.84■□□□□ 0.29
PRAME-205ENST00000405655 HMG20BQ9P0W2 317 aa16.84■□□□□ 0.29
PRAME-205ENST00000405655 LIMCH1Q9UPQ0 1083 aa16.84■□□□□ 0.29
PRAME-205ENST00000405655 LRP5O75197 1615 aa16.83■□□□□ 0.29
PRAME-205ENST00000405655 C4AP0C0L4 1744 aa16.83■□□□□ 0.29
PRAME-205ENST00000405655 C4BP0C0L5 1744 aa16.83■□□□□ 0.29
PRAME-205ENST00000405655 SCN7AQ01118 1682 aa16.83■□□□□ 0.28
PRAME-205ENST00000405655 PPFIA3O75145 1194 aa16.83■□□□□ 0.28
PRAME-205ENST00000405655 TOB2Q14106 344 aaPredicted RBP16.83■□□□□ 0.28
PRAME-205ENST00000405655 PUM3Q15397 648 aaKnown RBP16.83■□□□□ 0.28
PRAME-205ENST00000405655 CLEC4GQ6UXB4 293 aa16.83■□□□□ 0.28
PRAME-205ENST00000405655 DENND2AQ9ULE3 1009 aa16.83■□□□□ 0.28
PRAME-205ENST00000405655 RASGRF1Q13972 1273 aa16.82■□□□□ 0.28
PRAME-205ENST00000405655 NBPF5PQ86XG9 351 aaPredicted RBP16.82■□□□□ 0.28
PRAME-205ENST00000405655 SETDB2Q96T68 719 aa16.82■□□□□ 0.28
PRAME-205ENST00000405655 RPS6KB1P23443 525 aa16.82■□□□□ 0.28
PRAME-205ENST00000405655 IGHMBP2P38935 993 aaKnown RBP16.82■□□□□ 0.28
PRAME-205ENST00000405655 GYG1P46976 350 aa16.82■□□□□ 0.28
PRAME-205ENST00000405655 MCM2P49736 904 aa16.82■□□□□ 0.28
PRAME-205ENST00000405655 TPRNQ4KMQ1 711 aa16.82■□□□□ 0.28
PRAME-205ENST00000405655 LPIN2Q92539 896 aa16.82■□□□□ 0.28
PRAME-205ENST00000405655 HELLSQ9NRZ9 838 aa16.82■□□□□ 0.28
PRAME-205ENST00000405655 MROH5Q6ZUA9 1318 aa16.82■□□□□ 0.28
PRAME-205ENST00000405655 SLC9C2Q5TAH2 1124 aa16.81■□□□□ 0.28
PRAME-205ENST00000405655 RC3H1Q5TC82 1133 aaKnown RBP16.81■□□□□ 0.28
PRAME-205ENST00000405655 BLOC1S2Q6QNY1 142 aa16.81■□□□□ 0.28
PRAME-205ENST00000405655 GPHNQ9NQX3 736 aaPredicted RBP16.81■□□□□ 0.28
PRAME-205ENST00000405655 RFC4P35249 363 aa16.81■□□□□ 0.28
PRAME-205ENST00000405655 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.81■□□□□ 0.28
PRAME-205ENST00000405655 TM6SF1Q9BZW5 370 aa16.81■□□□□ 0.28
PRAME-205ENST00000405655 CWC22Q9HCG8 908 aaKnown RBP16.81■□□□□ 0.28
PRAME-205ENST00000405655 AK7Q96M32 723 aa16.8■□□□□ 0.28
PRAME-205ENST00000405655 BCL11BQ9C0K0 894 aaPredicted RBP16.8■□□□□ 0.28
PRAME-205ENST00000405655 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.79■□□□□ 0.28
PRAME-205ENST00000405655 KRT27Q7Z3Y8 459 aa16.79■□□□□ 0.28
PRAME-205ENST00000405655 PROM2Q8N271 834 aa16.79■□□□□ 0.28
PRAME-205ENST00000405655 GDPD2Q9HCC8 539 aa16.79■□□□□ 0.28
PRAME-205ENST00000405655 INCENPQ9NQS7 918 aa16.79■□□□□ 0.28
PRAME-205ENST00000405655 TNRC6CQ9HCJ0 1690 aaKnown RBP16.79■□□□□ 0.28
PRAME-205ENST00000405655 RFX7Q2KHR2 1363 aa16.79■□□□□ 0.28
PRAME-205ENST00000405655 GPAA1O43292 621 aa16.79■□□□□ 0.28
PRAME-205ENST00000405655 SLC5A1P13866 664 aa16.79■□□□□ 0.28
PRAME-205ENST00000405655 NUCB2P80303 420 aa16.79■□□□□ 0.28
PRAME-205ENST00000405655 NFIXQ14938 502 aa16.79■□□□□ 0.28
PRAME-205ENST00000405655 TRAPPC3LQ5T215 181 aa16.79■□□□□ 0.28
PRAME-205ENST00000405655 RNF20Q5VTR2 975 aa16.79■□□□□ 0.28
PRAME-205ENST00000405655 Q6ZUG5 572 aa16.79■□□□□ 0.28
PRAME-205ENST00000405655 SPATA5Q8NB90 893 aa16.79■□□□□ 0.28
PRAME-205ENST00000405655 GBP4Q96PP9 640 aa16.79■□□□□ 0.28
PRAME-205ENST00000405655 NEK1Q96PY6 1258 aa16.79■□□□□ 0.28
PRAME-205ENST00000405655 JAG2Q9Y219 1238 aa16.79■□□□□ 0.28
PRAME-205ENST00000405655 U3KPZ7 1027 aaPredicted RBP16.79■□□□□ 0.28
PRAME-205ENST00000405655 A0A1B0GUL6 1792 aa16.79■□□□□ 0.28
PRAME-205ENST00000405655 ZNF532Q9HCE3 1301 aa16.79■□□□□ 0.28
PRAME-205ENST00000405655 ARID4AP29374 1257 aaPredicted RBP16.78■□□□□ 0.28
PRAME-205ENST00000405655 ANKRD18AQ8IVF6 992 aa16.78■□□□□ 0.28
PRAME-205ENST00000405655 MINPP1Q9UNW1 487 aa16.78■□□□□ 0.28
PRAME-205ENST00000405655 ARAP2Q8WZ64 1704 aa16.78■□□□□ 0.28
PRAME-205ENST00000405655 FGAP02671 866 aa16.78■□□□□ 0.28
PRAME-205ENST00000405655 ADD2P35612 726 aa16.78■□□□□ 0.28
PRAME-205ENST00000405655 NSFL1CQ9UNZ2 370 aaKnown RBP16.78■□□□□ 0.28
PRAME-205ENST00000405655 E7EWF7 191 aa16.77■□□□□ 0.28
PRAME-205ENST00000405655 NPHP1O15259 732 aa16.77■□□□□ 0.28
PRAME-205ENST00000405655 BRD1O95696 1058 aa16.77■□□□□ 0.28
PRAME-205ENST00000405655 PDE6AP16499 860 aa16.77■□□□□ 0.28
PRAME-205ENST00000405655 GJB2P29033 226 aa16.77■□□□□ 0.28
PRAME-205ENST00000405655 SF3B3Q15393 1217 aaKnown RBP16.77■□□□□ 0.28
PRAME-205ENST00000405655 INTS4Q96HW7 963 aaKnown RBP16.77■□□□□ 0.28
PRAME-205ENST00000405655 GPR101Q96P66 508 aaPredicted RBP16.77■□□□□ 0.28
PRAME-205ENST00000405655 TFCP2L1Q9NZI6 479 aa16.77■□□□□ 0.28
PRAME-205ENST00000405655 PRPF40AO75400 957 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms