RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 H7C1W4 665 aa13.23□□□□□ -0.29
RPAIN-204ENST00000405578 SLC10A3P09131 477 aa13.23□□□□□ -0.29
RPAIN-204ENST00000405578 HCLS1P14317 486 aaPredicted RBP13.23□□□□□ -0.29
RPAIN-204ENST00000405578 KIAA2012Q0VF49 1180 aa13.23□□□□□ -0.29
RPAIN-204ENST00000405578 PDE3AQ14432 1141 aa13.23□□□□□ -0.29
RPAIN-204ENST00000405578 DPP8Q6V1X1 898 aaPredicted RBP13.23□□□□□ -0.29
RPAIN-204ENST00000405578 SAMD7Q7Z3H4 446 aa13.23□□□□□ -0.29
RPAIN-204ENST00000405578 ITPRIPQ8IWB1 547 aa13.23□□□□□ -0.29
RPAIN-204ENST00000405578 YDJCA8MPS7 323 aa13.22□□□□□ -0.29
RPAIN-204ENST00000405578 PDE8AO60658 829 aa13.22□□□□□ -0.29
RPAIN-204ENST00000405578 GNAI3P08754 354 aa13.22□□□□□ -0.29
RPAIN-204ENST00000405578 UBTFL1P0CB47 393 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-204ENST00000405578 RRP1P56182 461 aaKnown RBP13.22□□□□□ -0.29
RPAIN-204ENST00000405578 TMEM57Q8N5G2 664 aa13.22□□□□□ -0.29
RPAIN-204ENST00000405578 CSRNP1Q96S65 589 aa13.22□□□□□ -0.29
RPAIN-204ENST00000405578 ZBTB12Q9Y330 459 aaPredicted RBP13.22□□□□□ -0.29
RPAIN-204ENST00000405578 PLIN1O60240 522 aa13.21□□□□□ -0.29
RPAIN-204ENST00000405578 EGFRP00533 1210 aa13.21□□□□□ -0.29
RPAIN-204ENST00000405578 CCDC152Q4G0S7 254 aa13.21□□□□□ -0.29
RPAIN-204ENST00000405578 TBC1D10BQ4KMP7 808 aaPredicted RBP13.21□□□□□ -0.29
RPAIN-204ENST00000405578 MPNDQ8N594 471 aa13.21□□□□□ -0.29
RPAIN-204ENST00000405578 PAPPA2Q9BXP8 1791 aa13.2□□□□□ -0.3
RPAIN-204ENST00000405578 CACNA1FO60840 1977 aa13.2□□□□□ -0.3
RPAIN-204ENST00000405578 SCN9AQ15858 1988 aa13.2□□□□□ -0.3
RPAIN-204ENST00000405578 HABP4Q5JVS0 413 aaKnown RBP13.2□□□□□ -0.3
RPAIN-204ENST00000405578 PPP4R3CPQ6ZMV5 832 aa13.2□□□□□ -0.3
RPAIN-204ENST00000405578 DDX46Q7L014 1031 aaKnown RBP13.2□□□□□ -0.3
RPAIN-204ENST00000405578 PANK1Q8TE04 598 aa13.2□□□□□ -0.3
RPAIN-204ENST00000405578 JARID2Q92833 1246 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-204ENST00000405578 PLA2G12BQ9BX93 195 aa13.2□□□□□ -0.3
RPAIN-204ENST00000405578 USP44Q9H0E7 712 aa13.2□□□□□ -0.3
RPAIN-204ENST00000405578 HDAC9Q9UKV0 1011 aa13.2□□□□□ -0.3
RPAIN-204ENST00000405578 DDX19BQ9UMR2 479 aa13.2□□□□□ -0.3
RPAIN-204ENST00000405578 UTYO14607 1347 aa13.19□□□□□ -0.3
RPAIN-204ENST00000405578 CTSWP56202 376 aa13.19□□□□□ -0.3
RPAIN-204ENST00000405578 SF3B3Q15393 1217 aaKnown RBP13.19□□□□□ -0.3
RPAIN-204ENST00000405578 PKN2Q16513 984 aaKnown RBP13.19□□□□□ -0.3
RPAIN-204ENST00000405578 RBM26Q5T8P6 1007 aaKnown RBP13.19□□□□□ -0.3
RPAIN-204ENST00000405578 RASAL3Q86YV0 1011 aa13.19□□□□□ -0.3
RPAIN-204ENST00000405578 SP8Q8IXZ3 490 aa13.19□□□□□ -0.3
RPAIN-204ENST00000405578 DCPSQ96C86 337 aaKnown RBP13.19□□□□□ -0.3
RPAIN-204ENST00000405578 TNNQ9UQP3 1299 aa13.19□□□□□ -0.3
RPAIN-204ENST00000405578 RBBP6Q7Z6E9 1792 aaKnown RBP13.19□□□□□ -0.3
RPAIN-204ENST00000405578 PSMD14O00487 310 aa13.18□□□□□ -0.3
RPAIN-204ENST00000405578 GNAI2P04899 355 aa13.18□□□□□ -0.3
RPAIN-204ENST00000405578 NBPF7P0C2Y1 421 aaPredicted RBP13.18□□□□□ -0.3
RPAIN-204ENST00000405578 RLBP1P12271 317 aa13.18□□□□□ -0.3
RPAIN-204ENST00000405578 CASP7P55210 303 aa13.18□□□□□ -0.3
RPAIN-204ENST00000405578 MVPQ14764 893 aaKnown RBP13.18□□□□□ -0.3
RPAIN-204ENST00000405578 ZNF296Q8WUU4 475 aaPredicted RBP13.18□□□□□ -0.3
RPAIN-204ENST00000405578 DPF2Q92785 391 aa13.18□□□□□ -0.3
RPAIN-204ENST00000405578 SUPT16HQ9Y5B9 1047 aaKnown RBP13.18□□□□□ -0.3
RPAIN-204ENST00000405578 PSME4Q14997 1843 aa13.18□□□□□ -0.3
RPAIN-204ENST00000405578 BBOX1O75936 387 aa13.17□□□□□ -0.3
RPAIN-204ENST00000405578 REM2Q8IYK8 340 aaPredicted RBP13.17□□□□□ -0.3
RPAIN-204ENST00000405578 CDCA5Q96FF9 252 aa13.17□□□□□ -0.3
RPAIN-204ENST00000405578 CDC5LQ99459 802 aaKnown RBP13.17□□□□□ -0.3
RPAIN-204ENST00000405578 MEIS3Q99687 375 aa13.17□□□□□ -0.3
RPAIN-204ENST00000405578 DBNDD1Q9H9R9 158 aa13.17□□□□□ -0.3
RPAIN-204ENST00000405578 GGA3Q9NZ52 723 aa13.17□□□□□ -0.3
RPAIN-204ENST00000405578 COG6Q9Y2V7 657 aa13.17□□□□□ -0.3
RPAIN-204ENST00000405578 CHMP3Q9Y3E7 222 aa13.17□□□□□ -0.3
RPAIN-204ENST00000405578 TBC1D8O95759 1140 aa13.16□□□□□ -0.3
RPAIN-204ENST00000405578 CCDC57Q2TAC2 916 aa13.16□□□□□ -0.3
RPAIN-204ENST00000405578 KIF4BQ2VIQ3 1234 aa13.16□□□□□ -0.3
RPAIN-204ENST00000405578 SULF1Q8IWU6 871 aa13.16□□□□□ -0.3
RPAIN-204ENST00000405578 SUCLG2Q96I99 432 aa13.16□□□□□ -0.3
RPAIN-204ENST00000405578 ASTN2O75129 1339 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-204ENST00000405578 ANKRD18BA2A2Z9 1011 aa13.15□□□□□ -0.3
RPAIN-204ENST00000405578 CSF1RP07333 972 aa13.15□□□□□ -0.3
RPAIN-204ENST00000405578 IFIT5Q13325 482 aaKnown RBP13.15□□□□□ -0.3
RPAIN-204ENST00000405578 TAF7LQ5H9L4 462 aa13.15□□□□□ -0.3
RPAIN-204ENST00000405578 FBXO46Q6PJ61 603 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-204ENST00000405578 LMBR1LQ6UX01 489 aa13.15□□□□□ -0.3
RPAIN-204ENST00000405578 TMC4Q7Z404 712 aa13.15□□□□□ -0.3
RPAIN-204ENST00000405578 TTLL11Q8NHH1 800 aa13.15□□□□□ -0.3
RPAIN-204ENST00000405578 CCDC85AQ96PX6 553 aaPredicted RBP13.15□□□□□ -0.3
RPAIN-204ENST00000405578 BICC1Q9H694 974 aaKnown RBP13.15□□□□□ -0.3
RPAIN-204ENST00000405578 KIAA0100Q14667 2235 aaKnown RBP13.15□□□□□ -0.31
RPAIN-204ENST00000405578 ZBTB7BO15156 539 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-204ENST00000405578 RPS12P25398 132 aaKnown RBP13.14□□□□□ -0.31
RPAIN-204ENST00000405578 FOXO4P98177 505 aa13.14□□□□□ -0.31
RPAIN-204ENST00000405578 GRAPQ13588 217 aa13.14□□□□□ -0.31
RPAIN-204ENST00000405578 C20orf194Q5TEA3 1177 aa13.14□□□□□ -0.31
RPAIN-204ENST00000405578 GRAPLQ8TC17 118 aaPredicted RBP13.14□□□□□ -0.31
RPAIN-204ENST00000405578 LRRFIP2Q9Y608 721 aaKnown RBP13.14□□□□□ -0.31
RPAIN-204ENST00000405578 RTL9Q8NET4 1388 aa13.14□□□□□ -0.31
RPAIN-204ENST00000405578 COL4A1P02462 1669 aa13.14□□□□□ -0.31
RPAIN-204ENST00000405578 RIMBP2O15034 1052 aa13.13□□□□□ -0.31
RPAIN-204ENST00000405578 ITGA6P23229 1130 aa13.13□□□□□ -0.31
RPAIN-204ENST00000405578 IGHMBP2P38935 993 aaKnown RBP13.13□□□□□ -0.31
RPAIN-204ENST00000405578 RPS8P62241 208 aaKnown RBP13.13□□□□□ -0.31
RPAIN-204ENST00000405578 WASHC4Q2M389 1173 aa13.13□□□□□ -0.31
RPAIN-204ENST00000405578 RABL6Q3YEC7 729 aaPredicted RBP13.13□□□□□ -0.31
RPAIN-204ENST00000405578 ANKRD18AQ8IVF6 992 aa13.13□□□□□ -0.31
RPAIN-204ENST00000405578 MPHOSPH8Q99549 860 aa13.13□□□□□ -0.31
RPAIN-204ENST00000405578 GREM2Q9H772 168 aa13.13□□□□□ -0.31
RPAIN-204ENST00000405578 MKI67P46013 3256 aaKnown RBP13.13□□□□□ -0.31
RPAIN-204ENST00000405578 GPR25O00155 361 aa13.12□□□□□ -0.31
RPAIN-204ENST00000405578 ECE2O60344 883 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms